Entry information : TsSDL01(Thhalv10006477)
Entry ID 18417
Creation 2023-03-23 (Bruno Savelli)
Last sequence changes 2023-03-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2023-10-30 (Christophe Dunand)
Peroxidase information: TsSDL01(Thhalv10006477)
Name TsSDL01(Thhalv10006477)
Class SOD like    [Orthogroup: SDL001]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Eutrema
Organism Thellungiella salsuginea (Eutrema salsugineum)    [TaxId: 72664 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TsSDL01
start..stop
S start..stop
AtSDL01 437 4.04e-158 16..239 16..239
NoffSDL01-1B 434 4.6e-157 1..239 1..246
ThasSDL01 369 1.42e-131 26..233 1..208
AtMSD01 330 7.25e-116 30..235 25..230
Literature and cross-references TsSDL01(Thhalv10006477)
Cluster/Prediction ref. Genebank:   18020021
Protein sequence: TsSDL01(Thhalv10006477)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   241 (221)
PWM (Da):   %s   26790.73 (24721.5) Transmb domain:   %s   i5-22o (i5-22o)
PI (pH):   %s   6.97 (7.17) Peptide Signal:   %s   cut: 21 range:21-241
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSIVVTIILI FAILAVSLDG KREKTMEPCL ESMKTASLPD LPYAYDALEP AISEEIMRLH HQKHHQTYVT QYNKALGSLR SALADGDHSS VVKLQSLIKF NGGGHVNHAI FWKNLAPVHE  GGGKPPQDPL CSAIDAHFGS LEGLMQKMNA EGAAVQGSGW VWFGLDKELK RLVVETTANQ DPLVTKGPHL VPLIGIDVWE HAYYPQYKNA RAEYLKNIWS VINWKYAADI FEKHNRDLNE 

Retrieve as FASTA  
Remarks
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAGCATCG TTGTTACTAT CATCTTGATC TTTGCTATTT TAGCGGTGAG CCTTGACGGT AAAAGAGAGA AAACCATGGA GCCGTGTCTC GAGTCGATGA AGACGGCTTC ACTGCCTGAT  CTTCCTTACG CTTACGATGC GCTAGAGCCA GCGATCAGTG AGGAGATCAT GCGGTTGCAC CACCAAAAAC ACCACCAGAC TTACGTCACT CAGTACAACA AAGCTCTCGG CAGCCTCCGC  TCCGCCTTGG CCGACGGTGA TCACTCCTCC GTCGTCAAAC TCCAAAGCCT CATCAAGTTC AACGGCGGAG GTCACGTTAA CCACGCAATC TTCTGGAAGA ACCTAGCCCC TGTTCATGAA  GGAGGTGGTA AGCCACCGCA AGATCCTTTG TGTTCTGCGA TCGATGCTCA TTTCGGATCC TTAGAGGGAT TGATGCAAAA GATGAATGCT GAAGGCGCTG CTGTGCAAGG ATCTGGATGG  GTGTGGTTTG GATTAGACAA AGAGCTGAAG AGACTTGTCG TTGAGACCAC AGCCAATCAG GATCCGTTGG TGACTAAAGG ACCACATTTG GTACCTCTAA TCGGGATTGA CGTATGGGAG  CACGCTTACT ATCCGCAGTA CAAGAATGCA AGAGCGGAGT ACTTGAAGAA CATTTGGAGT GTGATCAATT GGAAATATGC CGCAGACATA TTCGAGAAGC ACAATCGAGA TCTAAACGAG 
TTTTAG 

Retrieve as FASTA