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Entry information : OsAPx05(LOC_Os12g07830)
Entry ID 1869
Creation 2006-06-28 (Christophe Dunand)
Last sequence changes 2010-08-03 (Marie Brette (Scipio))
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2010-08-03 (Marie Brette (Scipio))
Peroxidase information: OsAPx05(LOC_Os12g07830)
Name OsAPx05(LOC_Os12g07830)
Class Ascorbate peroxidase    [Orthogroup: APx2002]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons
Organism Oryza sativa ssp japonica cv Nipponbare    [TaxId: 39947 ]
Cellular localisation Stromal
Tissue type Leaves
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value OsAPx05
start..stop		 S start..stop
OsAPx06 541 0 1..320 1..309
TaAPx03-1D 536 0 4..320 3..313
TaAPx03-1B 535 0 4..320 3..313
SiAPx06 535 0 4..320 3..311
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 3962880..3962969 88 N° 2 3962647..3962778 130 N° 3 3962223..3962343 119 N° 4 3962041..3962141 99
N° 5 3961854..3961941 86 N° 6 3960764..3960831 66 N° 7 3960590..3960676 85 N° 8 3960315..3960389 73
N° 9 3960158..3960235 76 N° 10 3959954..3960058 103 N° 11 3959843..3959860 16  
complement(join(3959843..3959860,3959954..3960058,3960158..3960235,3960315..3960 389,3960590..3960676,3960764..3960831,3961854..3961941,3962041..3962141,3962223. .3962343,3962647..3962778,3962880..3962969))


exon

Literature and cross-references OsAPx05(LOC_Os12g07830)
Literature Kikuchi,S. et al. (2003)
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science 301 (5631), 376-379.
Protein ref. UniProtKB:   Q2QWY1
DNA ref. GenBank:   NC_008405.1 (3962969..3959846)
Protein sequence: OsAPx05(LOC_Os12g07830)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   320
PWM (Da):   %s   34608.76 Transmb domain:   %s   o386-408i528-550o570-592i749-766o
PI (pH):   %s   6.32
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAVVHRILRRGLSAASPLPSLRGLLLVSPQELGRRPASSSSSAAAAAGDVEAELRAAREDVRQLLKSNPCHPILVRLGWHDAGTYDKNITEWPKCGGANGSLRFGVELVHAANKGLLKAL
FLVIPIKSKYAGVTYADIFQLASATAIEAGGPKIPMIYGRADVADGEECPPEGRLPAADPPSPAEHLREVFYRMGLSDEIVALSGAHTLGRARPERSGWGKPETKYTENGPGAPGGQSWT
SEWLKFDNSYFKEIKERRDEDLLVLPTDAVLFEDSSFKIHAEKYAEDQDAFFEDYAEAHAKLSNLGAKFDPPKGISLE*

Retrieve as FASTA  
Remarks Complete sequence from 4 ESTs.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCGTCGTGCACCGCATCCTCCGCCGCGGGCTCTCCGCCGCCTCTCCCCTCCCTTCTCTCCGCGGCCTCCTCCTCGTCTCCCCTCAGGTACCACCTATTCACGCTCCCCTCGGCGTC
CATTACCCGCGCCGGCGCACGGTTTCTTGATTTTTTTTATCGGTGATGTTTCTTTCGCTTTCCCCGCGAAGGAGAGCTCGGCAGGCGTCCGGCGAGCTCGTCGTCGTCGGCGGCGGCGGC
TGCGGGGGACGTGGAGGCTGAGCTGCGCGCCGCGCGGGAGGACGTCAGGCAGCTGCTCAAGTCCAACCCCTGCCATCCCATCCTGGTACCCTGTACAAAAATTTTTAGATTATCTGTCTA
GCTGTCAAATTTTGCATCTGTAAACAAGTTCGTTATCACTGTGATATGTAGTGAACTAGTGCTAACAATATGGTCTATGTGATTGCGTGTTTAGTTAACTGGTAGATTATGCTGTTCGAA
CCAATAATTTTAGACTTTGAGGGGATGACTGATGAGGAATAGCTATTTTTTTTTAGTATTCGCTATATTTGCGTGGTTCATGGTTGTGCATCTTCTTGATCAAACATGCATATTTATGAC
ATGTCTGCTGAGTTACCATTGGTTTCAGGTGTTCGGTTAGGGTGGCATGACGCTGGCACTTACGATAAGAACATCACTGAATGGCCAAAGTGTGGTGGTGCGAATGGTAGCTTGAGATTT
GGAGTTGAGTTAGTACATGCAGCTAACAAAGGTAGTGGCGCGTCTGGTCCATTAAGTATCAGTTGGTTCCTGATGCATATATGATGATTCTTACAGTAGTTCTCTGCTGCAGGTGTCTTC
TGAAGGCGTTATTCTTGGTCATTCCCATCAAGAGCAAGTATGCAGGTGTCACTTATGCAGATATATTTCAACTTGCCAGTGCTACAGCCATTGAGGTCCTTCTGGCACTTCTAATCTAAT
CTAATGATATCTATCATTCAAATAGTTCTTCCTTATTTAGTGGTGATATGACTGCTTTGGCTTTCGCATTTCAGGAGAAGCCGGTGGCCCCAAGATCCCCATGATCTATGGAAGGGCTGA
TGTTGCTGATGGTGAAGAATGCCCACCTGAGGGGAGACTTCCTGGTCAGTAACTTTTAGGTTCTGTAGACCAAATTTGTTCATAACCATGATTTGTCGTCTATAAACAAAACTATAATGC
TGTCCCTTTAGTGTCATGTCATACCGATCTCAAGTTACTATTGCAGTGGGTCATCATCTTACAACTTCATTTCCCAGATGCTACTTTCTTCTAATTCATTAAACTTAGAATATTGATATG
TTCTAGAGCATTGAAATTTAATTGATATGCGTTTCAAAACACAGAAATAAACTTACAAATTTACTCTATTTGTCCTCTCCTTTTATCTCAATTTACGAGTTACATGCAATGCAACTGAGA
TACCTGATTGATGTAATCCTTTTCAAGCTTGTACACCTCTCACTTTAAGGAACCACCCATATCAAAATCTTTATTTGTCTGTTGTATGTACTCACACCAAAGTATGTTAACGTAGTGTCA
ATAATAGAGGACATAAATATAATTGTAAATTTTTTCTTGCTACTAACTCATTGTAGGTGGCCTGTTATTTTTAAACAGATAATGGTCTGCCTATAATAGGTTGTTGCATTCCTGGTAATG
TTTCCCAGGTCCAACTTATTTAGAAGGTTTAGGCAGGGTACCTTATTCATGTATCTGTGGATTTTAGTTTGTGAAATACCAAAATTGGTGTGAACAGACTAAAAAAAAAAGAAAGAAACA
AGTTATGAAATATTGCTACTGTGAGCTCTATAATCTGGTGTAATCACATTTTGGATACGCAAATGTGCAAGAAAAATTACTCCAGTTACAATTTAAGGAAAATTTAAAGCTGCCCATGCT
GCGCAGAATAAAAATCAGGCATGTGATCGTGCTTTGCCTGTGAAACTGATGAAATATTGCTTCCCTAGTCTTGCTGCAATTTCAGCTGTTTGGTTTTTGTAATCACATGGCATTGATATA
TTTCCTGCTCTGTCGTATACTGACGATGATCTAATCCTCTTTCCTTTTAATGTTGTTTCTGTTGGTACAATGTTGTTCCCTGCATTTTACATTTCCACCCTTTCAGCTCTGCTGACCCAC
CTTCACCTGCTGAACACTTGCGAGAAGTATTCTACAGAATGGGCCTGAGTGACAAGGTACTTGCAAACTGGTTGATTCAATATTCCAAACAACTTTTCTGGGGGGTTTGCATTGGCTAGT
CTCATCTGTTTCGCGATCTGCAGGAGAAATTGTTGCGTTGTCAGGAGCTCATACACTTGGTCGAGCTAGACCAGAGCGTAGTGGATGGGGTAAACCAGAAACAAAATACACTGTATGTAA
CTTACAGCAGTTGGTATTGTTCTGATTTTAAGAACACCTTGTCCATTGATGCATTTTCGAGTATTGCATGCTATTTAGTTATTACTATTTTTAGATTAGCACACCTTCATGAAGTTCTTC
TGATGGTGAATTTGTTCTTCTGATGGTGAATTTGTTATCTGGCTAATTGATTATTTTTCTTGACTGGCAAAGGAGAAAATGGGCCTGGTGCTCCTGGAGGGCAATCTTGGACATCTGAGT
GGCTCAAGTTTGACAACAGCTACTTCAAGGTAGGATGCACAATTTTCTATATTAATACTAAGCATTATAGCAGTAATAGAACTTATGCAAGTCTGCATACATATTCAGGAGAAATCAAAG
AACGCCGAGATGAGGATCTTCTAGTTCTCCCTACTGATGCTGTGCTCTTTGAGGACTCATCATTCAAGGTTAGTGAAGTTGCTCATCAGCTAGTGTTGTAAAGAATTGCAAATCAAAAGT
GATGCTCTAAATTTTTTTCTTTTTTTGCTTGCTTGTCATGCCTGAAGATATCCATGCTGAAAAGTATGCTGAGGATCAGGATGCATTTTTCGAAGACTATGCTGAAGCTCATGCCAAACT
GAGCAATCTTGGGGCAAAGTTTGATCCTCCAAAGGTAAATGAGATTAAAGACTTCCTCACTTCCATTATTGGAATGGAGAAAATGTCCAGTCAACTTGACTTGCTTATTATCGCTGAAAT
GGCACAGGGGGTATTTCACTTGAATAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCGTCGTGCACCGCATCCTCCGCCGCGGGCTCTCCGCCGCCTCTCCCCTCCCTTCTCTCCGCGGCCTCCTCCTCGTCTCCCCTCAGGAGCTCGGCAGGCGTCCGGCGAGCTCGTCG
TCGTCGGCGGCGGCGGCTGCGGGGGACGTGGAGGCTGAGCTGCGCGCCGCGCGGGAGGACGTCAGGCAGCTGCTCAAGTCCAACCCCTGCCATCCCATCCTGGTTCGGTTAGGGTGGCAT
GACGCTGGCACTTACGATAAGAACATCACTGAATGGCCAAAGTGTGGTGGTGCGAATGGTAGCTTGAGATTTGGAGTTGAGTTAGTACATGCAGCTAACAAAGGTCTTCTGAAGGCGTTA
TTCTTGGTCATTCCCATCAAGAGCAAGTATGCAGGTGTCACTTATGCAGATATATTTCAACTTGCCAGTGCTACAGCCATTGAGGAAGCCGGTGGCCCCAAGATCCCCATGATCTATGGA
AGGGCTGATGTTGCTGATGGTGAAGAATGCCCACCTGAGGGGAGACTTCCTGCTGCTGACCCACCTTCACCTGCTGAACACTTGCGAGAAGTATTCTACAGAATGGGCCTGAGTGACAAG
GAAATTGTTGCGTTGTCAGGAGCTCATACACTTGGTCGAGCTAGACCAGAGCGTAGTGGATGGGGTAAACCAGAAACAAAATACACTGAAAATGGGCCTGGTGCTCCTGGAGGGCAATCT
TGGACATCTGAGTGGCTCAAGTTTGACAACAGCTACTTCAAGGAAATCAAAGAACGCCGAGATGAGGATCTTCTAGTTCTCCCTACTGATGCTGTGCTCTTTGAGGACTCATCATTCAAG
ATCCATGCTGAAAAGTATGCTGAGGATCAGGATGCATTTTTCGAAGACTATGCTGAAGCTCATGCCAAACTGAGCAATCTTGGGGCAAAGTTTGATCCTCCAAAGGGTATTTCACTTGAA
TAG

Retrieve as FASTA