Entry information : HaPrx19 (HanXRQChr15g0474421)
Entry ID 1875
Creation 2005-09-27 (Christophe Dunand)
Last sequence changes 2016-04-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaPrx19 (HanXRQChr15g0474421)
Name (synonym) HaPrx19 (HanXRQChr15g0474421)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaPrx19
start..stop
S start..stop
HaPrx16 543 0 10..327 12..331
LsaPrx27 498 3.13e-180 1..289 1..287
LsPrx27 498 3.75e-180 1..287 1..285
InPrx08 494 7.67e-178 20..327 21..331
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '1875' 'join(38154911..38155355,38155746..38156284)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 38154911..38155355 443 N° 2 38155746..38156284 537  
join(38154911..38155355,38155746..38156284)


exon

Literature and cross-references HaPrx19 (HanXRQChr15g0474421)
Literature Kozik,A., Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L.,Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison,P., Kolkman,J., Slabaugh,M.S., Livingston,K., Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K. Lettuce and Sunflower ESTs from the Compositae Genome Project
DNA ref. HanXRQ genome:   HanXRQChr15 (38154911..38156284)
EST ref. GenBank:   CD856013 [Fragment]
Cluster/Prediction ref. HanXRQ:   HanXRQChr15g0474421
Protein sequence: HaPrx19 (HanXRQChr15g0474421)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   327 (302)
PWM (Da):   %s   36511.5 (33665.0)  
PI (pH):   %s   9.36 (9.22) Peptide Signal:   %s   cut: 26 range:26-327
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAVRLNSLHLITYLTFTFLISSTHSQQLYTNFYQKSCPRFDQIMQ
ETTTNKQINSPTTAAAALRLFFHDCLVEGCDGSILISSTHFSKAERDADINLSLPGDGFDVVVRAKTALELACPG
VVSCSDILAVATRNLVTMMGGPFYTVKL
GRRDGLVSRASRVNLPKPSMPMNQLIEIFTSRGFTIQEMVALSGAHTIGLSHCTEIRSDIYNYSRTSPIDPSLNRRYAEGLRSACADYRKNP
SLSVFNDVMTPRNFDNAYFQNLPRGLGVLKSDRALVMDPRTRPFVELYARDQKAFFEAFGRAMEKLSLYGVKTGRRGEIRRRCDSFN

Retrieve as FASTA  
Remarks Complete sequence from genomic and 1 EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGTCAGACTAAACTCACTCCACCTCATCACATACCTCACATTCACATTCCTCATCTCCTCCACACACTCTCAACAACTCTACACAAACTTCTACCAGAAATCATGCCCTAGATTC
GACCAGATTATGCAGGAAACCACCACAAACAAACAAATCAACTCTCCGACCACCGCCGCCGCCGCTCTCCGCCTCTTTTTTCATGACTGCCTCGTCGAAGGCTGTGACGGATCTATATTA
ATCTCCTCCACACACTTCAGCAAAGCTGAACGTGATGCCGATATCAATTTATCCCTTCCTGGCGACGGTTTTGATGTCGTTGTTAGGGCGAAAACCGCTCTCGAACTCGCTTGTCCTGGT
GTCGTCTCCTGTTCAGATATCCTCGCTGTTGCTACTCGCAATCTTGTTACCATGATGGGCGGACCCTTCTACACCGTCAAATTAG
AGGTAAGATACTTTCTGTTGCGCCTAAAAAATAAC
GATTTCATCTAACACCCTGAAAGCATTTGGTACCAGGCACCGGTCGGTATGATACCGGGGACCGAATTATTTTTAGTACCGTATTGGTACCCGCTTTTTGTCGTTTTCGGACTGTACTTT
TGGTACATGTACCAGTTCGGTACCAGTATTTTACTGAATTTTTGCCTTCAATTACTGATAGTGTACTGAACATTTTTGGTACCGATACCAGTATTTGAAATGATTAAATCCGTTTTATAA
AAAATACAATGTGTAACATACAAATGTGTTAAAAACACAGATATAACTTAGTTACGTTAGTCTGAAAAACACAGATATAACTTAGTTACATTAGTCTGATCTGTTTTTTCAATCCAGGTC
GTAGAGACGGATTAGTTTCACGCGCCTCGCGCGTTAATCTACCTAAACCTTCAATGCCGATGAATCAACTGATTGAAATCTTCACATCTAGAGGCTTCACAATCCAGGAAATGGTGGCGT
TATCCGGCGCTCACACAATCGGACTATCTCACTGTACGGAAATCAGATCTGATATCTACAACTACAGCCGGACGTCACCGATCGATCCGTCGTTGAACCGGCGGTACGCCGAGGGTTTGC
GATCTGCGTGTGCGGATTACCGGAAAAATCCGTCCTTATCGGTGTTTAATGACGTCATGACGCCGAGAAACTTCGATAACGCGTATTTCCAGAACCTTCCGAGAGGTTTAGGAGTGTTGA
AATCGGATCGGGCGTTGGTGATGGATCCGAGAACGAGGCCGTTTGTGGAGTTGTATGCGAGAGATCAGAAGGCGTTCTTCGAGGCGTTCGGTCGAGCGATGGAGAAGTTGAGTTTGTATG
GTGTGAAGACTGGCCGGAGAGGTGAAATCCGGCGCCGGTGTGATTCGTTTAATTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGGTCAGACTAAACTCACTCCACCTCATCACATACCTCACATTCACATTCCTCATCTCCTCCACACACTCTCAACAACTCTACACAAACTTCTACCAGAAATCATGCCCTAGATTC
GACCAGATTATGCAGGAAACCACCACAAACAAACAAATCAACTCTCCGACCACCGCCGCCGCCGCTCTCCGCCTCTTTTTTCATGACTGCCTCGTCGAAGGCTGTGACGGATCTATATTA
ATCTCCTCCACACACTTCAGCAAAGCTGAACGTGATGCCGATATCAATTTATCCCTTCCTGGCGACGGTTTTGATGTCGTTGTTAGGGCGAAAACCGCTCTCGAACTCGCTTGTCCTGGT
GTCGTCTCCTGTTCAGATATCCTCGCTGTTGCTACTCGCAATCTTGTTACCATGATGGGCGGACCCTTCTACACCGTCAAATTAG
GTCGTAGAGACGGATTAGTTTCACGCGCCTCGCGC
GTTAATCTACCTAAACCTTCAATGCCGATGAATCAACTGATTGAAATCTTCACATCTAGAGGCTTCACAATCCAGGAAATGGTGGCGTTATCCGGCGCTCACACAATCGGACTATCTCAC
TGTACGGAAATCAGATCTGATATCTACAACTACAGCCGGACGTCACCGATCGATCCGTCGTTGAACCGGCGGTACGCCGAGGGTTTGCGATCTGCGTGTGCGGATTACCGGAAAAATCCG
TCCTTATCGGTGTTTAATGACGTCATGACGCCGAGAAACTTCGATAACGCGTATTTCCAGAACCTTCCGAGAGGTTTAGGAGTGTTGAAATCGGATCGGGCGTTGGTGATGGATCCGAGA
ACGAGGCCGTTTGTGGAGTTGTATGCGAGAGATCAGAAGGCGTTCTTCGAGGCGTTCGGTCGAGCGATGGAGAAGTTGAGTTTGTATGGTGTGAAGACTGGCCGGAGAGGTGAAATCCGG
CGCCGGTGTGATTCGTTTAATTAG

Retrieve as FASTA