Entry information : HaPrx22 (HanXRQChr10g029599)
Entry ID 1878
Creation 2005-09-27 (Christophe Dunand)
Last sequence changes 2016-04-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaPrx22 (HanXRQChr10g029599)
Name (synonym) HaPrx22 (HanXRQChr10g029599)
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaPrx22
start..stop
S start..stop
HargPrx05 644 0 1..320 1..320
HaPrx20 495 1.63e-178 22..320 32..330
HaPrx46 492 3.07e-177 16..320 22..327
HaPrx21 492 2.2e-176 22..320 78..376
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '1878' 'complement(join(117152901..117153319,117154967..117155129,117155203..117155583))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 117155203..117155583 379 N° 2 117154967..117155129 161 N° 3 117152901..117153319 417  
complement(join(117152901..117153319,117154967..117155129,117155203..117155583))


exon

Literature and cross-references HaPrx22 (HanXRQChr10g029599)
Literature Kozik,A., Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L.,Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison,P., Kolkman,J., Slabaugh,M.S., Livingston,K., Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K. Lettuce and Sunflower ESTs from the Compositae Genome Project
DNA ref. HanXRQ genome:   HanXRQChr10 (117155583..117152901)
EST ref. GenBank:   BQ915313 [Fragment]
Cluster/Prediction ref. HanXRQ:   HanXRQChr10g0295991
Protein sequence: HaPrx22 (HanXRQChr10g029599)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   320 (300)
PWM (Da):   %s   34209.51 (32026.4)  
PI (pH):   %s   8.32 (8.20) Peptide Signal:   %s   cut: 21 range:21-320
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MKVYTLMCLLLATLATMTQGQTRVGFYSTTCPRVETIVRNAVQTA
VRADPTLAAGVLRIFFHDCFVNGCDGSVLLDGPSSEKTAPPNVPLRGFEVIDAAKSQLETACPGVVSCADIAALA
ARDAVVL
AGGTSWQVPLGRRDGLVSQASDTVNLPGFNDPISVQIRKFADKNLNIQDLVTLVGGHTIGTGACVVFSYRLYNFNNTNQPDPDINPAFLPQLRALCPNGGDGSRRVALDTGSV
TRFDNSFYANLRNGRGVLESDAKLWSDPTTRPIVQRFLGLSGLLGLTFNVEFGRSMVKMGNIELKTGSQGEIRRVCRATN

Retrieve as FASTA  
Remarks Complete sequence from genomic and 1 EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGGTTTATACCTTGATGTGTCTTCTATTAGCCACCCTGGCCACCATGACACAAGGCCAGACAAGGGTTGGGTTTTATAGCACCACATGTCCAAGGGTTGAAACCATAGTACGAAAT
GCGGTTCAGACTGCTGTTCGAGCCGACCCCACACTTGCAGCTGGTGTACTAAGAATATTCTTCCATGACTGCTTTGTCAATGGTTGTGATGGGTCCGTACTACTTGACGGGCCATCAAGT
GAAAAGACCGCACCACCCAACGTCCCCTTGAGAGGATTCGAGGTTATCGATGCTGCAAAATCTCAGCTCGAAACCGCCTGCCCTGGAGTGGTCTCTTGTGCTGATATTGCTGCCCTTGCT
GCCCGTGACGCGGTGGTCCTG
GTTAGTATATCTTTTTGTAACATGATGTTTGTGTGTTATGAAGTTATCTAATTGCTTTAACTATGTTGTGCAGGCGCTGGTGGAACTAGTTGGCAAGTG
CCATTAGGACGTAGAGATGGATTGGTTTCACAAGCATCTGATACTGTAAACTTACCTGGCTTTAATGATCCTATTAGTGTCCAAATCAGAAAGTTTGCTGATAAAAATCTTAACATCCAA
GATCTTGTTACTCTTGTTG
GTAAGTACTAGGTAGCTACCTAGAGCACAAAATATATAAAAAAAAAAACTATATAATTTGTTTTTTTTTCTAAACTATGGAAATCTATATATGATAAAAAT
CAAAAGGAATGAACAGTTATTTTATTTATTTTTTATACAGTGGTTTATTAATCAAAAGGAATGAATTGTTATTTTTATTTATTTTTTATACAGTGATTTATTATTTATTTTTTAAATTTA
AATTACAGTAATTTATTATTTATTTTTTAAATTTAAATTAAAATTTAAATTAAAATTTAAATTAAAATTATAATGGAATGAATAGTAACATCATTAAGAGATGAGTAAATGGTATCGGGT
ATAGGTACCGTTCTCAAATTTACCAAATCGGTGTATTTTCGGTACCGGTTCTGCACAGGTATTCACCGGTTTTTACCCTCAAATACTGGTGCCGTACCAGTACCGACCGGTACCGAACCG
TACCATACTAGGTATATTCGGTACCGGTACCCACTTTTGGGGATTTCGGTAACGGTATTTTCGGTACCGGTTGGTACCGAGCTCATCAAATCCTGTAGCAATGCAGAAATGCAAGTAATT
GCACCGTTTAGATTACTTGTGATACACACAGTAAGTAAATTGTATTTCGTTTGAATGAGGTTTTATATACACAACAACTTATTTTGCTTTCTTTTTTGTCTTTTTCTGCAATGAATGAAT
TGTAGTATGTAAAATTAATTTGGATATTTAGAATATTGATGAGCAAATCGTATCAAATTCTCTAAACGAACCGGTATCGTATCGGTACCAAATTTACTATACCAAATCATTTTCGGTACT
AATTTGGTACCCACCTTTTTGGCGTTTTCAGAATCGTTACTTTCGGTTCGACACTGGTATAGCACCATACCTGTATTTATTGATTTTTACCTTCAAATACCATACCGTATTGTACCGAGC
ATTTTCGGTGCCGGTACCTAATTTTGATGATTTTCCGGATCGGTACTTTCTCTGCCGTTACCGGTAACGAGCTCATCCATATTTTAACGTGTTAGCATCGTAATAACTGAACTGAAAACA
ACCGAATTTCCAACGTGTAGGACGTGTGGGTCCTATTATTACATATTAGGTTTTTTAAAATCGTTTTTTATGACGGAGTGACTATCCTTACCACGTCATTTTATTTATGTTTTGATATTC
GGTATCTATTTGTCGTTGCTGACACGCCTTTTATAGTCATTAGGTCCCGCCGCAACGCGCGGGTGGAAAACAACTAGTTACCATTAAATATGCTGCTCCAAACATTTTATATTAATTATT
TGAATCTTACATATAACTATATTATATTATTTTTTTTACAAATAATCTTTAATATATTAGTTATCTTTTAACAAAAATGTATTTGTATTAATTGTTTTCGTTTTACAGATAAGTTTTTAA
CATTAGTTATTTTTATTTTACAAATAACATTTTTATGCGAATTATTTGAATTTTACAAAAAAAAAAAAAAAACAAAAACAAAATTTACATTAACCTAGTTATTTTACAAGTAATGATTTT
ATATTAAATATGTTTATTTAAAGAAAATATTTCTTTAATAAATTTATATATTACAAATAATGTTCTTCAATAGAAAATTAAGTTGATGTAACTTTGTGTTTTATAGGTGTGGACATACAA
TTGGAACAGGTGCTTGTGTAGTGTTCAGCTACAGGCTATACAACTTCAACAACACCAACCAACCCGACCCGGATATCAACCCAGCATTCCTTCCCCAGCTCCGAGCCCTTTGTCCCAATG
GCGGAGATGGGTCGAGACGCGTGGCCTTAGACACAGGCAGCGTTACGCGCTTCGATAACTCCTTTTATGCAAACTTGAGGAATGGAAGGGGAGTTCTTGAATCCGATGCAAAGCTATGGA
GTGACCCGACAACACGACCGATCGTCCAACGGTTCCTCGGACTTAGTGGACTACTTGGATTAACATTTAATGTTGAGTTTGGAAGATCCATGGTAAAGATGGGTAACATTGAGTTGAAAA
CTGGGAGTCAAGGAGAAATCCGAAGGGTTTGTAGGGCAACCAACTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAGGTTTATACCTTGATGTGTCTTCTATTAGCCACCCTGGCCACCATGACACAAGGCCAGACAAGGGTTGGGTTTTATAGCACCACATGTCCAAGGGTTGAAACCATAGTACGAAAT
GCGGTTCAGACTGCTGTTCGAGCCGACCCCACACTTGCAGCTGGTGTACTAAGAATATTCTTCCATGACTGCTTTGTCAATGGTTGTGATGGGTCCGTACTACTTGACGGGCCATCAAGT
GAAAAGACCGCACCACCCAACGTCCCCTTGAGAGGATTCGAGGTTATCGATGCTGCAAAATCTCAGCTCGAAACCGCCTGCCCTGGAGTGGTCTCTTGTGCTGATATTGCTGCCCTTGCT
GCCCGTGACGCGGTGGTCCTG
GCTGGTGGAACTAGTTGGCAAGTGCCATTAGGACGTAGAGATGGATTGGTTTCACAAGCATCTGATACTGTAAACTTACCTGGCTTTAATGATCCTATT
AGTGTCCAAATCAGAAAGTTTGCTGATAAAAATCTTAACATCCAAGATCTTGTTACTCTTGTTG
GTGGACATACAATTGGAACAGGTGCTTGTGTAGTGTTCAGCTACAGGCTATACAAC
TTCAACAACACCAACCAACCCGACCCGGATATCAACCCAGCATTCCTTCCCCAGCTCCGAGCCCTTTGTCCCAATGGCGGAGATGGGTCGAGACGCGTGGCCTTAGACACAGGCAGCGTT
ACGCGCTTCGATAACTCCTTTTATGCAAACTTGAGGAATGGAAGGGGAGTTCTTGAATCCGATGCAAAGCTATGGAGTGACCCGACAACACGACCGATCGTCCAACGGTTCCTCGGACTT
AGTGGACTACTTGGATTAACATTTAATGTTGAGTTTGGAAGATCCATGGTAAAGATGGGTAACATTGAGTTGAAAACTGGGAGTCAAGGAGAAATCCGAAGGGTTTGTAGGGCAACCAAC
TAA

Retrieve as FASTA