Entry information : HaPrx23 ( HanXRQChr15g0469051)
Entry ID 1879
Creation 2005-09-27 (Christophe Dunand)
Last sequence changes 2016-04-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaPrx23 ( HanXRQChr15g0469051)
Name (synonym) HaPrx23 ( HanXRQChr15g0469051)
Class Class III peroxidase    [Orthogroup: Prx028]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaPrx23
start..stop
S start..stop
HargPrx11 627 0 1..316 1..316
LsPrx17 566 0 7..316 8..316
LsaPrx17 564 0 7..316 8..316
LsePrx17 543 0 7..316 8..316
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '1879' 'complement(join(16925731..16926122,16926239..16926404,16926739..16926927,16927019..16927222))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 16927019..16927222 202 N° 2 16926739..16926927 187 N° 3 16926239..16926404 164 N° 4 16925731..16926122 390
complement(join(16925731..16926122,16926239..16926404,16926739..16926927,1692701 9..16927222))


exon

Literature and cross-references HaPrx23 ( HanXRQChr15g0469051)
Literature Kozik,A., Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L.,Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison,P., Kolkman,J., Slabaugh,M.S., Livingston,K., Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K. Lettuce and Sunflower ESTs from the Compositae Genome Project
DNA ref. HanXRQ genome:   HanXRQChr15 (16927222..16925731)
Cluster/Prediction ref. HanXRQ:   HanXRQChr15g0469051 UniGene:   Han.2245 [3' end]
Protein sequence: HaPrx23 ( HanXRQChr15g0469051)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   316 (294)
PWM (Da):   %s   35040.16 (32482.8)  
PI (pH):   %s   6.65 (5.73) Peptide Signal:   %s   cut: 23 range:23-316
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MRFDAIMKVVVMLVIMLRHCNGLSMNYYMLSCPMAEFIVRNSVNS
ALRADPTLAAGLLRMHFHDCFIE
GCDASILLDSTDDNTAEKDSPANLSLRGYEVIDDAKQQLENQCPGVVSCADIVAMAARDAVLFSAPGLIYDIPKGRKDGTRSKIEDTRNLPPPIFNSSELIKMFGQKGFTAQEMVALSGG
HTLGVARCSAFKNRLKNFDSTHDVDPNMDTQFMKTLVKTCSAGDTAEQPFDATRNNFDNAYYRALQRQAGLLTSDQTLMTDPNTRPIVNAYAMNQAMFFFDFQRAMVKMGQLDVKETGQV
RQNCRKIN

Retrieve as FASTA  
Remarks Complete sequence from genomic and 3 ESTs.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGATTTGATGCTATCATGAAAGTGGTGGTAATGCTAGTGATCATGCTAAGACATTGTAACGGTCTTAGCATGAACTACTACATGTTGAGTTGCCCTATGGCCGAGTTCATTGTTAGA
AACTCGGTCAACTCAGCTTTGAGAGCCGACCCAACACTCGCTGCGGGTCTTCTCAGGATGCACTTCCATGATTGTTTCATTGAG
GTACTCGGTTTGTCTTTTGTTCGTGTAACTCTACTT
ATGTTTTATGTTTTGTCCTCATTTAATCTTTAAAAATTGCATGTTTTACATGTAGGGGGTTGTGATGCATCCATTTTGCTTGATTCTACGGATGACAACACGGCGGAGAAAGATTCTCCC
GCGAATTTGAGCTTGAGGGGCTACGAGGTCATCGACGATGCCAAACAACAACTTGAAAACCAGTGCCCTGGTGTCGTGTCATGTGCCGATATTGTAGCAATGGCTGCCCGTGATGCGGTT
CTCTTT
GTAAGTACACATATACTTAAATCCAATTTAATACATATATACACATAATTCACACGCTCATTTCAGAACCAATAATTATATTGAGAAGTGCTAGAATCACGTAATGAAATTTTA
CCATTTGCTTTAAGTGTAATACAATATAACACATATATCTACCCCCAATATCTTTCTTTCTCTAATAAATCATCAATGAGCTACGTACAAGTGTTATATGTTGTTGTCGCAGTTCTCAAC
ATAATATTGGTTCTGAAAAGAATGTGTTCCTATGTATACATATATATATACGGACATGTCAGGTTTATGTGATATTGACACGTCATTTGCAATCGTGTAGAGAGCGCTCCGGGTCTAATT
TATGATATACCAAAAGGAAGAAAAGATGGAACAAGATCCAAAATTGAAGACACAAGAAACTTGCCTCCACCAATCTTCAACAGCAGTGAACTAATTAAAATGTTTGGGCAAAAGGGTTTC
ACAGCTCAAGAAATGGTTGCCCTTTCTG
GTACACTTTTTATTTTTATAAAAAAAAAAGATATTAATTAATATCATAAAAATCTAATACAATTTGATAAGTTTTTTCACTCAAAAGGGTTA
AATGGACTAACATTGGTCATGTAGGTGTGGACATACACTAGGAGTGGCTCGATGTTCCGCGTTCAAGAACCGTCTAAAAAACTTTGACTCGACACATGATGTGGACCCGAACATGGACAC
CCAGTTCATGAAAACGCTAGTGAAGACATGTAGCGCTGGAGACACTGCGGAACAACCATTTGACGCGACAAGAAACAATTTTGATAATGCGTACTACAGGGCGCTTCAAAGGCAGGCGGG
ACTCCTGACATCGGACCAAACCTTGATGACTGATCCCAATACCCGGCCCATTGTCAACGCATACGCGATGAACCAAGCCATGTTCTTTTTCGATTTTCAACGAGCCATGGTGAAGATGGG
GCAGCTTGATGTTAAAGAGACCGGACAAGTTCGCCAAAACTGCCGCAAAATCAACTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGATTTGATGCTATCATGAAAGTGGTGGTAATGCTAGTGATCATGCTAAGACATTGTAACGGTCTTAGCATGAACTACTACATGTTGAGTTGCCCTATGGCCGAGTTCATTGTTAGA
AACTCGGTCAACTCAGCTTTGAGAGCCGACCCAACACTCGCTGCGGGTCTTCTCAGGATGCACTTCCATGATTGTTTCATTGAG
GGTTGTGATGCATCCATTTTGCTTGATTCTACGGAT
GACAACACGGCGGAGAAAGATTCTCCCGCGAATTTGAGCTTGAGGGGCTACGAGGTCATCGACGATGCCAAACAACAACTTGAAAACCAGTGCCCTGGTGTCGTGTCATGTGCCGATATT
GTAGCAATGGCTGCCCGTGATGCGGTTCTCTTT
AGCGCTCCGGGTCTAATTTATGATATACCAAAAGGAAGAAAAGATGGAACAAGATCCAAAATTGAAGACACAAGAAACTTGCCTCCA
CCAATCTTCAACAGCAGTGAACTAATTAAAATGTTTGGGCAAAAGGGTTTCACAGCTCAAGAAATGGTTGCCCTTTCTG
GTGGACATACACTAGGAGTGGCTCGATGTTCCGCGTTCAAG
AACCGTCTAAAAAACTTTGACTCGACACATGATGTGGACCCGAACATGGACACCCAGTTCATGAAAACGCTAGTGAAGACATGTAGCGCTGGAGACACTGCGGAACAACCATTTGACGCG
ACAAGAAACAATTTTGATAATGCGTACTACAGGGCGCTTCAAAGGCAGGCGGGACTCCTGACATCGGACCAAACCTTGATGACTGATCCCAATACCCGGCCCATTGTCAACGCATACGCG
ATGAACCAAGCCATGTTCTTTTTCGATTTTCAACGAGCCATGGTGAAGATGGGGCAGCTTGATGTTAAAGAGACCGGACAAGTTCGCCAAAACTGCCGCAAAATCAACTAA

Retrieve as FASTA