Entry information : LminPrx[P]93(Lemmin39g0758910.t2)
Entry ID 18891
Creation 2023-06-12 (Christophe Dunand)
Last sequence changes 2023-06-13 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2023-06-20 (Christophe Dunand)
Peroxidase information: LminPrx[P]93(Lemmin39g0758910.t2)
Name LminPrx[P]93(Lemmin39g0758910.t2)
Class Class III peroxidase     [Orthogroup: Prx231]*
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons
Organism Lemna minor    [TaxId: 4472 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LminPrx[P]93
start..stop
S start..stop
LminPrx95 457 9.55e-165 14..244 97..327
LminPrx94 455 8.09e-164 14..244 97..327
LminPrx91 454 1.38e-163 14..244 97..327
LminPrx90 408 1.65e-145 14..244 97..323
Literature and cross-references LminPrx[P]93(Lemmin39g0758910.t2)
Protein sequence: LminPrx[P]93(Lemmin39g0758910.t2)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   244
PWM (Da):   %s   26422.88  
PI (pH):   %s   4.89
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTFIEKPVVF PCKSLRGFEL IDEAKAALES RCPNTVSCAD VLAFAARDAA RFTGGFYYGL PGGRRDGTVS RESEVGENLP GFNSNAEELR DEFAKKGLSL EDMVALSGAH SIGVSHCSSF  SSRLYDFNST HSQDPSLDAD LADYLKKCCP PPGTEGDTVD LDVATPKILD VHYYRNLKKG KGLLTSDQML WASSLTADMV ASFSKNPEVW FHKYAEAMER MGGIDVLTGN EGEIRVKCSV 
VNGY 

Retrieve as FASTA  
Remarks Incorrect prediction from Lemna.org. Exon 1 and start of exon 2 are missing/ Not found upstream.
Promoter
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AGAGAGGGAG AAACCAGATA GAGAGTCCAC GGGAGAGAGA TAGAGTTGAG AGACGAGAAA TCGTAGAGAG TTCCAAGTTG GAAGAGGGCA GAAATCAGAG GTACAGCACG CGCGGGGAGA  GAAAAAGCTG AAACAGAGAG AGAGAGAGAG AGAGAGAGCA GGTAGATAGC AAAGATCTGA GAGAGAAAGA TATTATTCTA GCGAGAGAGT GAACGCGGGG AGAGAGAAGA TATCTATACC  TACATATCGG TTGCAACTCC CGGCGGGACA AATTTACATA CCGACAGAAC TCTCTCTCTC CCCCTCTCTC TCTAACCTCC CTCCCTCTCT CTCTCTCTCC CTCCTCTCTC TCTCTCTCTC  TCTCTCTCTC TCTCTCTCTC TCTCTGTCTC TCTCTCTCTG TCTCTCTCTG TCTCTCCCCG TTCAGAGTGC CGTTGATTTA TCCCTGTCGA ACACTCTTCC TAGCGGGGAG AGTGTGAGGA  TGGAGAAAAC ACGCAGGGTA AGAAAGAGTA CACGGAGAAA TAGAGCGGGA AGAGAGAGAA CAAGAAGTCC ATGTTAAACT TAATTTAGTA CATAGAGAAA CAGCTCATCG GAGTTCTTCT  TAGTGGGTGG TCTCCAAGTC TAACCTGACT GCCTTGCCCT CTTTTATTGT CCCCGTCTTG AACGCGAAGG TTTAGAACAT TTCTACCGAT AAAGCCGGTG AGCTGACGAA TCAACTTTCA  AAGGAAATAG GCGAAGGCGT CCCAGAATGA CGCGAGCTGT GGATGACTTA ACAAGTCTCC ACGTATATAT TATTTCTATA AACTAGCTCA TCTCTCTCTC CTCTCCTCTC TCTCTATCTC  TCTGTCTCTC TCTCTGTCTC TCTGTCTCTC TCTCTGTCTC TCTCTGTCTC TCTCTCTGTC TCTATCTCTC TCTCTCTCTC CGTCTCTCTC TGTCTCTGTG CTCCTCTCTC GCCTCCTCTC  CCTCTCTCTC TCTCTCTGTC CCGCTGTCTC TCTCTCTCTC ACTCTCTCTC TCTGTCTCTC TGTCTCTGTC TCTGTCTCTG TCTCTGTCTC TCTCTGTCTC TCTCTCTCTC TCTCTCTCTC  TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTGTA TAATATTTCG GATCCCATCT GGAGTCTACA AATATTCCCC CCCGCCCCCT CTCTCCGGCT GTATTTTCTG  ATAAGAAAAT TGACCGGCGC AAACGAATGT ACCTCGATAT AGAGGACGTG GTCAGGCCGG AAGACTGTGT CTCCTCCATT TAGAGAATAG GTCAATAATC ACCCTCCCTT ATTCTATCAT  CTACCGCACG AAGGGAATAA GAACATCCAC CTACCCAAGG AGGAACGGCA TTCTATAAAT ATAACCCAAA ATATAACCCA AATCGAATCC ATCAAGTAGC GAGAGAGAGG GAGAGGAAGA  GATTTTGGTT TTTTGCTTCG ACATTATTCC CCAGGATTTC ATTTCCACAG AAGAGAGAGA TCAAACTATT GCGATACGTC TCTCTTCTTT ATCTCTCATC CTCTAAACAT ATCTTTATTA  TTGTACGCCA AAAAAGGACA TGTGCAAAGC CTCTCTCTCT CTCTCTCTTC TAGCAACATC TGTCTGATTA AACCTCTCCC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC  TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTGGTTAAT AAAGAAACAA AAGCTCATAA TACAACATCA AATTTCTGCC ATCGAAAATG AATTTTTTGT CCGGCTAATA  CCATATTTCT CTACTAGATC TCATCTCCTC GGGCACACAA AAACCTTGTT GTTTAGACCA AATTTATACG TGTGTGTAAT GTTGAGAGTT CATGGACTAG CAACCGGCCA TGAACAGAAA 
ATGAACAAGA AGAAGATGAA GAAGAGAATC GTCGCACTAC TTCTCACTAT TATTCAAACA AATTTTACTA GTGGTTCCGG 

Retrieve as FASTA  
Terminator +
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Send to cis Analysis
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AGCTTTGTCC AGCCCTCTGC CGCGCCATTT ATTCCCCCCT ATTCTTTTAT TCTTCTCCTA TTTTACACCA AATAAACGCC TTGCAGGGCT CCGCCATCTG CTATCCATCT GCGTCATGTA  ATCTCCACGA AATGTCAAAA AATTACAGGC AATAATTGAC AGGGTTCTTG ATCTTCACGT CGTGGTTAGA GTGTTATAGG CGGCGTTTCT AGCCCGGAGA GGTTGATTCT CCAAGTACGA  TGAGCATTTC CTGGTTAGTT CTTCAATACT GATCTTTTCT TCGAATTGGG TTTTCTGCGA TCCAACAACC CTGTTAAATG TAGGAGTGGA TCACATGATC CATGCTCTAA GATTCTTATT  TAATATATGA GATTTGTTCA TTGTGGTCTT CAATGATTGG AATTATGAAA ACATTTGGTA TAGGAGCCAG ACATGCTCCA ATTTTTTCTT TCATGTTTTG ACCGATGATC TCTCAGTTGA  TTTTTTCCGT CCCCCCAATC ATCCTTTTGG CCAAGAATTA CAAATAGTGT TCGTATCTCC TAATGGAAAT ACGAGTGTTA TTTTATTTGG TTATAGAAAA ATATTTAGGT GTAGTTGGTT  ATCCCTACTC TCTCTCTCTC TCTCGTTACG CGAAAATCAC TTTTCCTGAT AGGAGAACGT CTCCGGCCTG TAGAAAATAA TTCTAAATTA TACGATACAG GTTACATGGT CCCTTCTTTC  ATGCTTCGTT CAAGGATATG TTCGAGGAAA TACGGATAAT CAATTTAAAT TTCCAGCTGC GATTTTTCTT ATCAAACACA AGGACAAGTG CTCAAGAACA TGAAGAACAG AAAAAAAATG  AGAAATAAAG TGAAAGATCG ATTGGATTTG AGAGGACACC GAATGAAAAC AGAAGAAAAT AAGAAAATTT GATTGGAAAC ACAGAATCAC CATCAAAGAA CAGAAAAAAG AACCAGAATC  CAAGAAGACC TCCCAGAAAA TGAAGAACGT GATCAAGATT TTTCTAAAAA GGAAACCCAT TGTTAGAACT CCCCTTGATC TTGATCTTTT GGCTTCGAGG TCACTGTTGA AACCTAGAGA  AATCAAGATC AAGATCTCTG AATGCATGAA ATTACTTAAA ATCACAAAGA TGAGATCAAG GAATCTTGAA ACAGATTGAA GCAGAAAACC AATCAAGAAC ATAAAAGAAT TTTGCACTGA  ACTGAAGTCT ACGGCAAGAA CTACCTAAGC AAATAGGAAC TGGAACAAAT GAGAACCTTG GAGAGTATTT CTACTCCCTA TCCATAATTT TTATAGAGAG AGAGAGAGAA GCACACTCGA  TTTTTAATGA AATTTTAAAG AAATGGCGGT CAATACTTCA ATTTTAACTT TTTACTGAAA TTTCAAATTT TAAATAAAAG ATTATGAATA TTAGTTTTAG CTCTTGCACG ATGACAATGT  CACATCATCC CTCTTGCGTA GAGAGCATAA CCACTATGAC CAGATTAGAA CCGTCATTGA CGTGTATTGG GATTTGCTTA TTCACCAACC GGATATTCAA AATACGTCAA AAGCAACTCT  GATTTTTCTT TGGCTCGAAC ACAGTGACGT CTACCGCACG GGAAAAGAAA GAAGAGTCAT GGTGGGACAA ACTGGGAAGT GGAGTGTTGA GAAAACAAGA GGACTGCATC CATATGCACA  ACCCCTAATG CCACGCACTC TATTCTTTGT TCATTTAGTT TCCTATGTCA TGACGTTTAG GATCTCAATT TCGAAGAGGG AATCTATCGT TTTTGAGGTA TCATTCATGG TCTTCATCCC  CCTTTGGATC TTTGTTGTCT ATACTTTGAA AGGGTTTCCG AGTCCTATAT GATTGAACGG ATGAAGTAGA TCGCTCATAG CATGAATGAA CGTAGACATG CTGATCCTAA AACCTGATTC 
TTCTTTGAAT ATGCGCCGAG CCACTTCATT CAATAATAGT TATTCAGCAA TAGCCTGTCT TTTATTTTGT CTTTCTTCAA 

Retrieve as FASTA  
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACATTTA TAGAGAAACC GGTGGTTTTC CCATGCAAAA GGTTTCTTGA AACCATCGAA ATATCATTTG ATACTTTTAA ATCGTTCAAT ATCTAACAAG ATAGTCTAGA AAAGTACGTT  CAGCATTTTA TTATCCTTCA ACTAGAGGTG ATTCAAAATA TGTAACTTAG TTATAAAGGC GAAACCATAG ATTACATGCA AAAATAATTT GAATAATTTC TATGGATAGC AAGCATCAGA  AATCTAAAGA GCGATCCATC AACTCTGTTA AATCTACGAG TGGATCACAT GATCCATGCT CTAAGATTAT TATTTAAAGA TGATCCACAA GATTAAATAT ATGAGACTTG TTCATTGTGG  TCTTCAATGA TTGGAATTTT GAAAACATTT GGTGTACGAG CCAGTGATCA AACGACGGAG ACAATTTTTT CTTTCATGAT TTGACCAATG ATCTCTCGGT TGATTTTTTC TGCCCTCCAA  ATTATCCTTT TGGCCAAGAA TAACTACTAG TGTTCTTATT TTTAGATTGT TAGTCAACAT TGGAAAGTTA AACCAGAAGA TCGAAGATTC AATCTATGAA AGCCTCCCGA TCCTACTTGC  CTACACACAT AATGGATACA ATAAGTTGAA ATCCAAGTCT GCGAGGTTTT GAGCTGATAG ACGAAGCCAA GGCTGCCCTC GAGTCCCGCT GCCCCAACAC TGTGTCTTGC GCCGACGTCC  TGGCCTTCGC AGCTCGCGAC GCCGCGCGCT TCACCGGAGG CTTCTACTAC GGGCTTCCGG GAGGAAGGAG AGACGGGACG GTCTCTAGAG AGTCGGAGGT CGGAGAAAAC CTACCGGGTT  TTAATAGCAA TGCCGAGGAA CTAAGAGACG AGTTTGCGAA GAAGGGCTTG TCCCTGGAGG ATATGGTGGC GCTCTCGGGC GCGCACTCCA TCGGCGTCTC CCATTGCTCG TCCTTCTCTT  CCAGGCTTTA CGACTTCAAT TCCACGCATT CCCAGGATCC TTCCTTGGAC GCCGATCTTG CCGACTACCT CAAGAAGTGC TGCCCGCCTC CGGGGACGGA GGGCGACACT GTGGATTTGG  ACGTCGCCAC GCCCAAAATC TTGGACGTGC ACTACTACAG AAATCTCAAG AAAGGGAAGG GCCTACTCAC CTCCGATCAG ATGCTCTGGG CCAGCTCCCT CACGGCCGAC ATGGTGGCCT  CCTTTTCAAA GAACCCCGAA GTCTGGTTTC ACAAGTACGC CGAAGCGATG GAGCGAATGG GTGGCATCGA TGTCCTCACC GGGAATGAGG GGGAGATCAG GGTCAAATGC TCTGTCGTCA 
ACGGCTACTG A 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACATTTA TAGAGAAACC GGTGGTTTTC CCATGCAAAA GTCTGCGAGG TTTTGAGCTG ATAGACGAAG CCAAGGCTGC CCTCGAGTCC CGCTGCCCCA ACACTGTGTC TTGCGCCGAC  GTCCTGGCCT TCGCAGCTCG CGACGCCGCG CGCTTCACCG GAGGCTTCTA CTACGGGCTT CCGGGAGGAA GGAGAGACGG GACGGTCTCT AGAGAGTCGG AGGTCGGAGA AAACCTACCG  GGTTTTAATA GCAATGCCGA GGAACTAAGA GACGAGTTTG CGAAGAAGGG CTTGTCCCTG GAGGATATGG TGGCGCTCTC GGGCGCGCAC TCCATCGGCG TCTCCCATTG CTCGTCCTTC  TCTTCCAGGC TTTACGACTT CAATTCCACG CATTCCCAGG ATCCTTCCTT GGACGCCGAT CTTGCCGACT ACCTCAAGAA GTGCTGCCCG CCTCCGGGGA CGGAGGGCGA CACTGTGGAT  TTGGACGTCG CCACGCCCAA AATCTTGGAC GTGCACTACT ACAGAAATCT CAAGAAAGGG AAGGGCCTAC TCACCTCCGA TCAGATGCTC TGGGCCAGCT CCCTCACGGC CGACATGGTG  GCCTCCTTTT CAAAGAACCC CGAAGTCTGG TTTCACAAGT ACGCCGAAGC GATGGAGCGA ATGGGTGGCA TCGATGTCCT CACCGGGAAT GAGGGGGAGA TCAGGGTCAA ATGCTCTGTC 
GTCAACGGCT ACTGA 

Retrieve as FASTA