Sequence Properties
first value : protein second value (mature protein)
|
Length (aa): |
250 |
PWM (Da): |
27472.73 |
|
PI (pH):
| 6.24 |
|
Sequence 440
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MTKNYPTVSEDYKKAVEKCRRKLRGLIAEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRFDAEQAHGANSGIHIALRLLDPIREQFPTISFADFHLAGVVAVEVTGGPDIPFHPGREDKPQPPPEGRLPDATKGCDHLRDVFAKQMGLSDKDIVALSGAHTLGRCHKDRSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQLVSDKALLDDPVFRPLVEKYADEDAFFADYAEAHMKLSELGFADA |
Retrieve as FASTA
|
|
Remarks |
Complete sequence from 20 cDNAs, 403 ESTs, and genomic (chromo 1, 7 introns and 1 extra intron in 5'UTR). |
Promoter►
Send to BLAST
Send to cis Analysis
|
|
Terminator +►
Send to BLAST
Send to cis Analysis
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GCTGTGACGT ATGCTCTGTG TGTGTGTGTG TGTCTCCCCG AGAGTCATGG CTGTTTTTGG TTGGGGGCTG GAGGGGTCGC ATTGCATTTG AACTTTGTCA TATGATTGCT TAATGTACTC
TCGGATTTAC GTATCTGTTT TTTTCGGTGG GTTGCGATTT GAACACATCC GTTGCGCTTT TGCTGCTTAG ACACATTAAT AAAATTAATT TCTCTCGATA TTTATGCCTC AAATCCATTC
ATATCTGCTT AGTCTCTAAT AACAGTAGAA CTTGGATTAA GAGTTTGAAG ATACAGTGGC TAATTGCCTA TATAAAGTGA TAAACAGCCA AATCTTTAAT CAGAAGTAGA AGTATTAGTA
TAACATGATT TGACTATGTA CTACGAGATC AATGGTAAAC CTGACATTGT TCCAAAACCA ATCTAGACCA GTTCACTTAC CGAATTTTAG TTCCATACCC ATAAACCAAT CCAAAGTGAT
TCTATCACCA CATGCAACAG CATGTAATGA TGTGGTGCCC GAATAGGCGG ATTCCATCGA TGTTGATCAG ACGATGCTTT AGATCAAAGA CCGGCGTGAG CTGAGACGGA TGGCTCTGGC
TTATAATGTC ACCACTATGA TTACCAAAGT GTTTGCTGCT TTGATCACGG CCGAGGGAGT AAAGAGCTTG AAGTCAAGTG TTATTCAAAT GATTGTCATT CAGCACTCCT TTTCTAGGTG
AAGGATCTTG CCTATGCGCT TCTCTAAAAC CGTTTTTTTT TCTATTTTTA TGTTGTCGAT GGAAACGTCT CTTATTTTTA TCTTGAATTG AACCGAATCT GCAATTAGGA CCCTCTTGAA
TCTTGAGTGG TCTATGTCGT AATCAGGTTT TAGAAAAGAT GAGATTGGAG CGACGAGTAG AGAGAAGGGA AGAGTGGAGT GACTTTTTGT GAACACGTTC ACACCATTTA GAGTTCGAAA
CGGTTCTTTT TTCTTTTTGT GTGTGTGTGT GGGAAATTG
|
Retrieve as FASTA
|
|
DNA ►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGACGAAGAACTACCCAACCGTGAGCGAAGATTACAAGAAGGCTGTTGAGAAGTGCAGGAGGAAGCTCAGAGGTTTGATCGCTGAGAAGAACTGTGCACCCATCATGGTCCGACTCGCG TAAGTAACTAACCATATTTGCTTGTGGTTTTGAAGTATGTAGGATTATGAACTTTCTCATGGCTGATCTGTCTGGCTAAACTGCAGATGGCACTCTGCTGGAACTTTCGATTGTCAATCA AGGACTGGAGGTCCATTCGGAACAATGAGGTTTGACGCTGAGCAAGCTCATGGAGCCAACAGTGGTATCCACATTGCTCTTAGGTTGTTGGACCCCATCAGGGAGCAATTCCCTACCATC TCTTTTGCTGATTTCCATCAGGTACATGGTTTTAAATTTTAAAAAGCACTATTTGGTTAACGGTGATAACTGTAAGGTTTGGATTCTAACTCTAGATATCCTTGTGGTGTGAAATTGATC ATTCAGCTTGCTGGTGTTGTGGCCGTTGAAGTTACTGGTGGCCCTGACATTCCTTTCCACCCTGGAAGAGAGGTTAGTCATTGCTGTAGATTTGTTTGCCGTCTCTAAGGTTATCATATA CTCAATTTGGTCGAGAGAACGTGTTCTGCTTTCTTTGTAGAGATGGCTGATTGATAATTGTGGGACTTGATTTTCTGTTTCTAAAATGCATATCTTGATTTCAGGACAAGCCCCAACCAC CTCCAGAGGGTCGTCTTCCTGATGCTACCAAGGGTTGTGACCATTTGAGAGATGTCTTTGCTAAGCAGATGGGCTTATCTGACAAAGACATTGTCGCTTTATCTGGTGCCCACACTCTGG TTCGTTTCTCTCCAACTGCTTAAAACTTTAAAATTTGTTTGCTCCAAGCTTACAAATTCTGATGAGTGCTAGCAAAATATGATATCGCAGGGACGATGCCACAAGGATAGGTCTGGCTTC GAAGGTGCATGGACATCAAACCCTCTAATCTTCGACAACTCTTACTTCAAGTGAGTATCCCAAGTTCCCTTGTAGGAGGATTCAGTGGCTTATATGGTTACTAATCAAATTATATATGGG CAGGGAACTCTTGAGCGGAGAGAAGGAAGGCCTTCTTCAGCTTGTCTCTGACAAAGCACTATTGGACGACCCTGTTTTCCGTCCTTTGGTCGAGAAATACGCTGCTGTATGTCTTTCATT CCCTTTTTTCTGTTTTTCACTTGGTAGAGAGAGAGAGAAGAGAACTCATGGTTTCTTGTGACAATGTGAACAGGATGAAGATGCCTTTTTCGCTGATTACGCTGAGGCCCACATGAAGCT TTCTGAGCTTGGGTACTTATCCTGAATCTATGAATCATTTAGAAAGTAAATATTAATTCAGTGGTGTGATTTGAGTTTGTATCTGTTGGTTGCAGGTTTGCTGATGCTTAA |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGACGAAGAACTACCCAACCGTGAGCGAAGATTACAAGAAGGCTGTTGAGAAGTGCAGGAGGAAGCTCAGAGGTTTGATCGCTGAGAAGAACTGTGCACCCATCATGGTCCGACTCGCA TGGCACTCTGCTGGAACTTTCGATTGTCAATCAAGGACTGGAGGTCCATTCGGAACAATGAGGTTTGACGCTGAGCAAGCTCATGGAGCCAACAGTGGTATCCACATTGCTCTTAGGTTG TTGGACCCCATCAGGGAGCAATTCCCTACCATCTCTTTTGCTGATTTCCATCAGCTTGCTGGTGTTGTGGCCGTTGAAGTTACTGGTGGCCCTGACATTCCTTTCCACCCTGGAAGAGAG GACAAGCCCCAACCACCTCCAGAGGGTCGTCTTCCTGATGCTACCAAGGGTTGTGACCATTTGAGAGATGTCTTTGCTAAGCAGATGGGCTTATCTGACAAAGACATTGTCGCTTTATCT GGTGCCCACACTCTGGGACGATGCCACAAGGATAGGTCTGGCTTCGAAGGTGCATGGACATCAAACCCTCTAATCTTCGACAACTCTTACTTCAAGGAACTCTTGAGCGGAGAGAAGGAA GGCCTTCTTCAGCTTGTCTCTGACAAAGCACTATTGGACGACCCTGTTTTCCGTCCTTTGGTCGAGAAATACGCTGCTGATGAAGATGCCTTTTTCGCTGATTACGCTGAGGCCCACATG AAGCTTTCTGAGCTTGGGTTTGCTGATGCTTAA |
Retrieve as FASTA
|
|
cDNA►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CTCGTTTCTG TTCTGTGGTT CGATATTAGC TTAGCTAAGA TGACGAAGAA CTACCCAACC GTGAGCGAAG ATTACAAGAA GGCTGTTGAG AAGTGCAGGA GGAAGCTCAG AGGTTTGATC
GCTGAGAAGA ACTGTGCACC CATCATGGTC CGACTCGCAT GGCACTCTGC TGGAACTTTC GATTGTCAAT CAAGGACTGG AGGTCCATTC GGAACAATGA GGTTTGACGC TGAGCAAGCT
CATGGAGCCA ACAGTGGTAT CCACATTGCT CTTAGGTTGT TGGACCCCAT CAGGGAGCAA TTCCCTACCA TCTCTTTTGC TGATTTCCAT CAGCTTGCTG GTGTTGTGGC CGTTGAAGTT
ACTGGTGGCC CTGACATTCC TTTCCACCCT GGAAGAGAGG ACAAGCCCCA ACCACCTCCA GAGGGTCGTC TTCCTGATGC TACCAAGGGT TGTGACCATT TGAGAGATGT CTTTGCTAAG
CAGATGGGCT TATCTGACAA AGACATTGTC GCTTTATCTG GTGCCCACAC TCTGGGACGA TGCCACAAGG ATAGGTCTGG CTTCGAAGGT GCATGGACAT CAAACCCTCT AATCTTCGAC
AACTCTTACT TCAAGGAACT CTTGAGCGGA GAGAAGGAAG GCCTTCTTCA GCTTGTCTCT GACAAAGCAC TATTGGACGA CCCTGTTTTC CGTCCTTTGG TCGAGAAATA CGCTGCTGAT
GAAGATGCCT TTTTCGCTGA TTACGCTGAG GCCCACATGA AGCTTTCTGA GCTTGGGTTT GCTGATGCTT AAGCTGTGAC GTATGCTCTG TGTGTGTGTG TGTGTCTCCC CGAGAGTCAT
GGCTGTTTTT GGTTGGGGGC TGGAGGGGTC GCATTGCATT TGAACTTTGT CATATGATTG CTTAATGTAC TCTCGGATTT ACGTATCTGT TTTTTTCGGT GGGTTGCGAT TTGAACACAT
CCGTTGCGCT TTTGCTGCTT AGACACATTA ATAAAATTAA TTTCTCTCGA TATTTATGCC TC
|
Retrieve as FASTA
|
|