Entry information : StPrx27(Soltu.DM.08G001100)
Entry ID 1930
Creation 2006-08-29 (Christophe Dunand)
Last sequence changes 2006-08-29 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2021-11-03 (Christophe Dunand)
Peroxidase information: StPrx27(Soltu.DM.08G001100)
Name StPrx27(Soltu.DM.08G001100)
Class Class III peroxidase     [Orthogroup: Prx115]*
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Solanum tuberosum (Potato)    [TaxId: 4113 ]
Cellular localisation N/D
Tissue type Callus
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value StPrx27
start..stop
S start..stop
LePrx42 640 0 1..319 1..319
NtPrx40-1A 559 0 1..318 1..318
NtPrx39-1A 506 0 1..317 3..321
LpPrx07 447 8e-161 1..238 1..239
Literature and cross-references StPrx27(Soltu.DM.08G001100)
Literature Buell,C.R., Hart,A., Zismann,V., Karamycheva,S.A. and Baker,B. Generation of ESTs from potato callus tissue. Unpublished (2003)
Protein sequence: StPrx27(Soltu.DM.08G001100)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   319
PWM (Da):   %s   35224.81  
PI (pH):   %s   6.84
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTWPLLFLLF SSFAFSHAQL TLDYYAKTCP QFDSIVRDIS QQKQTEFPAT AAATLRVFFH DCAVDGCDAS ILIKPTAFNK SELDYDINHS LAGDAFDLIT RIKTAVELAC PGVVSCADIL  ATATRNLIVI TGGPHYKVQL GRKDSLVSNV SNVEAHLTRA NATVDLMINK FQSMGFDVKD MVVLIGGGHT IGFVHCKEFA HRIFPTPDPT MNPILVERLR KMCANYTSNN DMSAFLDVIS 
PGNFDNVLFK NLMKGIGVLG SDQLLHSDPR TKPFVELYAN NAIAFANDFA QAMEKVSVYQ VKIGQQGEVR KRCDSINHI* 

Retrieve as FASTA  
Remarks Complete sequence from genomic and 1 EST (no PS). Intronless
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACTTGGC CATTGCTTTT TCTCTTGTTT TCATCTTTTG CTTTTTCTCA TGCACAACTT ACATTGGACT ACTATGCTAA AACATGTCCA CAATTTGATT CCATTGTGAG GGACATCTCT  CAACAAAAAC AAACGGAATT CCCCGCCACG GCGGCCGCGA CCCTCCGCGT CTTTTTCCAC GACTGTGCTG TAGATGGTTG TGATGCCTCC ATCCTTATCA AACCAACCGC CTTCAACAAA  TCCGAGCTCG ACTACGACAT CAACCATTCC CTCGCGGGTG ACGCGTTTGA CCTAATCACC CGCATCAAGA CCGCGGTCGA GCTCGCTTGC CCGGGCGTTG TGTCGTGCGC GGACATCTTA  GCGACCGCCA CCCGAAACCT CATCGTCATA ACCGGTGGTC CCCACTACAA AGTCCAGTTG GGCCGGAAGG ACAGTCTAGT TTCCAACGTA TCAAACGTGG AAGCACACCT GACGCGTGCT  AACGCGACGG TTGACCTAAT GATCAATAAA TTCCAATCCA TGGGGTTTGA TGTCAAGGAC ATGGTTGTGT TGATTGGTGG TGGACATACA ATTGGATTTG TTCATTGTAA GGAGTTTGCT  CATAGGATAT TCCCAACTCC TGACCCTACA ATGAACCCAA TATTAGTTGA AAGATTGAGA AAAATGTGTG CAAATTATAC AAGTAACAAT GACATGTCAG CCTTCCTAGA TGTTATAAGT  CCTGGTAATT TTGACAATGT GTTGTTCAAG AATTTAATGA AGGGCATAGG GGTACTAGGT TCAGACCAAT TATTACATAG TGACCCTAGG ACAAAGCCAT TTGTTGAATT ATATGCCAAT  AATGCTATTG CATTTGCTAA TGATTTTGCT CAAGCAATGG AGAAAGTGAG TGTATATCAA GTCAAGATTG GTCAACAAGG AGAGGTGAGG AAGAGATGTG ATTCTATTAA TCACATTTGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACTTGGC CATTGCTTTT TCTCTTGTTT TCATCTTTTG CTTTTTCTCA TGCACAACTT ACATTGGACT ACTATGCTAA AACATGTCCA CAATTTGATT CCATTGTGAG GGACATCTCT  CAACAAAAAC AAACGGAATT CCCCGCCACG GCGGCCGCGA CCCTCCGCGT CTTTTTCCAC GACTGTGCTG TAGATGGTTG TGATGCCTCC ATCCTTATCA AACCAACCGC CTTCAACAAA  TCCGAGCTCG ACTACGACAT CAACCATTCC CTCGCGGGTG ACGCGTTTGA CCTAATCACC CGCATCAAGA CCGCGGTCGA GCTCGCTTGC CCGGGCGTTG TGTCGTGCGC GGACATCTTA  GCGACCGCCA CCCGAAACCT CATCGTCATA ACCGGTGGTC CCCACTACAA AGTCCAGTTG GGCCGGAAGG ACAGTCTAGT TTCCAACGTA TCAAACGTGG AAGCACACCT GACGCGTGCT  AACGCGACGG TTGACCTAAT GATCAATAAA TTCCAATCCA TGGGGTTTGA TGTCAAGGAC ATGGTTGTGT TGATTGGTGG TGGACATACA ATTGGATTTG TTCATTGTAA GGAGTTTGCT  CATAGGATAT TCCCAACTCC TGACCCTACA ATGAACCCAA TATTAGTTGA AAGATTGAGA AAAATGTGTG CAAATTATAC AAGTAACAAT GACATGTCAG CCTTCCTAGA TGTTATAAGT  CCTGGTAATT TTGACAATGT GTTGTTCAAG AATTTAATGA AGGGCATAGG GGTACTAGGT TCAGACCAAT TATTACATAG TGACCCTAGG ACAAAGCCAT TTGTTGAATT ATATGCCAAT  AATGCTATTG CATTTGCTAA TGATTTTGCT CAAGCAATGG AGAAAGTGAG TGTATATCAA GTCAAGATTG GTCAACAAGG AGAGGTGAGG AAGAGATGTG ATTCTATTAA TCACATTTGA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACTTGGC CATTGCTTTT TCTCTTGTTT TCATCTTTTG CTTTTTCTCA TGCACAACTT ACATTGGACT ACTATGCTAA AACATGTCCA CAATTTGATT CCATTGTGAG GGACATCTCT  CAACAAAAAC AAACGGAATT CCCCGCCACG GCGGCCGCGA CCCTCCGCGT CTTTTTCCAC GACTGTGCTG TAGATGGTTG TGATGCCTCC ATCCTTATCA AACCAACCGC CTTCAACAAA  TCCGAGCTCG ACTACGACAT CAACCATTCC CTCGCGGGTG ACGCGTTTGA CCTAATCACC CGCATCAAGA CCGCGGTCGA GCTCGCTTGC CCGGGCGTTG TGTCGTGCGC GGACATCTTA  GCGACCGCCA CCCGAAACCT CATCGTCATA ACCGGTGGTC CCCACTACAA AGTCCAGTTG GGCCGGAAGG ACAGTCTAGT TTCCAACGTA TCAAACGTGG AAGCACACCT GACGCGTGCT  AACGCGACGG TTGACCTAAT GATCAATAAA TTCCAATCCA TGGGGTTTGA TGTCAAGGAC ATGGTTGTGT TGATTGGTGG TGGACATACA ATTGGATTTG TTCATTGTAA GGAGTTTGCT  CATAGGATAT TCCCAACTCC TGACCCTACA ATGAACCCAA TATTAGTTGA AAGATTGAGA AAAATGTGTG CAAATTATAC AAGTAACAAT GACATGTCAG CCTTCCTAGA TGTTATAAGT  CCTGGTAATT TTGACAATGT GTTGTTCAAG AATTTAATGA AGGGCATAGG GGTACTAGGT TCAGACCAAT TATTACATAG TGACCCTAGG ACAAAGCCAT TTGTTGAATT ATATGCCAAT  AATGCTATTG CATTTGCTAA TGATTTTGCT CAAGCAATGG AGAAAGTGAG TGTATATCAA GTCAAGATTG GTCAACAAGG AGAGGTGAGG AAGAGATGTG ATTCTATTAA TCACATTTGA 

Retrieve as FASTA