View Redoxidase 1948

Entry information : GmPrx89 (Glyma06g42850.1)

Entry ID	1948
Creation	2009-01-05 (Christophe Dunand)
Last sequence changes	2011-07-04 (Qiang Li)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2011-12-13 (Qiang Li)

Peroxidase information: GmPrx89 (Glyma06g42850.1)

Name (synonym)

GmPrx89 (Glyma06g42850.1)

Class

Class III peroxidase [Orthogroup: Prx035]

Taxonomy

Eukaryota Viridiplantae Streptophyta Fabaceae Glycine

Organism

Glycine max (soybean) [TaxId: 3847 ]

Cellular localisation

N/D

Tissue type

Etiolated seedlings

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	GmPrx89 start..stop	S start..stop
GmPrx34	587	0	1..319	1..319
MtPrx57	505	0	8..319	6..317
PsPrx11	502	0	8..319	6..318
MtPrx97	501	0	7..319	5..317

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '1948' 'complement(join(46153752..46154303,46156101..46156292,46156886..46157101))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	46156886..46157101	214	N° 2	46156101..46156292	190	N° 3	46153752..46154303	550
complement(join(46153752..46154303,46156101..46156292,46156886..46157101))

Literature and cross-references GmPrx89 (Glyma06g42850.1)

DNA ref.	Phytozome 12: Gm06 (46157101..46153752)
EST ref.	GenBank: BQ080657 [3' end]

Protein sequence: GmPrx89 (Glyma06g42850.1)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	319 (294)
PWM (Da):	33967.03 (31143.6)	Transmb domain:	i5-27o
PI (pH):	8.4 (8.40)	Peptide Signal:	cut: 26 range:26-319

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MANSLNSHFFVVVFILSLLAFSSNAQLSPTFYAKTCPNVQTIVSSAMRQAVAKEARIGASILRLFFHDCFVNGCDGSILLDDTATFTGEKNAGPNRNSARGFEVIDTIKTNVEASCNATV
SCADILALATRDGIVLLGGPSWTVPLGRRDARTASQSAANNQIPGPSSDLSTLISMFASKGLTASDLTVLSGAHTIGQAQCQFFRTRIYNETNIDTNFAATRKTTCPATGGNTNLAPLET
LTPTRFDNNYYADLVNRRGLLHSDQVLFNGGSQDSLVRSYSGNSAAFSKDFAAAMVKLGNISPLTGSSGEIRRNCRVVN*

Retrieve as FASTA

Remarks

Complete sequence from genomic and 7 ESTs.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTAATTCTCTTAATAGCCACTTTTTTGTAGTAGTATTTATTCTTTCTCTCTTGGCCTTTTCTAGCAATGCACAACTATCTCCCACCTTCTATGCCAAAACTTGCCCCAATGTTCAA
ACCATAGTGAGCAGTGCAATGAGGCAAGCTGTTGCTAAAGAAGCCAGGATTGGTGCCTCTATTCTTCGTTTGTTCTTTCATGATTGCTTTGTAAATGTAAAGCCTCTAGCTAGCTACCCC
CCTCTTTGCATCTATGGCTCACAAAATTATTCTTAGTTACTGAATTAAGCTAATTAATAAGCTCACATTTTATTCCATATAATATATATAGGCTAGCTAGCTAGGATCAACTATGTCCAA
ATGGAAACCAAATTTACACTTTTACCCTCTGGATTTTCAATCTCAGACATATTCTTTTCTTTAAGTTTTTTTTTTATTGCATCATCTCAAAACTTTTGTTAGTTATCACATTAAAAGATG
GGTTTTCATTGTGAATTATTTTGTAATTTATAAACTACTATGACCTCAATTTAGCATATATGATATTAGAGTAAACTGCAATTTGTATGAGATCGAAGTAAGAAGTGAGAACATATATAG
CTTAGTTCCACCTCAAAAACCAGTTGAAGTTGTTAATTAACCTGAAGAAATTGTCCAAGTTATATATTATAAGTATTTAATTTTCAGTTCATAACTAGCCAATACTTGGCAATTTGTACA
AAGGGTTTTAAGTTCAATTAAGTTACAAAAAATTTAAGGTGGCCCAAAACAATTACATTTTTAATGTTAATTATTTCTTTTGTATGCAGGGGGTTGTGATGGATCAATCTTATTGGACGA
CACTGCCACATTCACTGGCGAGAAAAATGCAGGACCAAACAGAAATTCAGCGAGGGGCTTCGAAGTTATTGATACCATTAAAACCAACGTTGAAGCTTCTTGCAATGCCACCGTGTCGTG
TGCTGATATTCTAGCACTTGCCACAAGAGACGGAATTGTGCTGGTGAGCCAATTCTCCATAATTTAATTATTTGGCAAACTCTTCATCTTTAATGAATGATGCATAGTGCATGTATCATC
AGTGCTAATAATACACTATCTAATATTTTTTTTAAAAATATTCTTTTATTATTGATTAAAATTTATCAGAATATGAGTGTGTTCTTAATTTTATAATTTCTACAAATTTGAATCAATGCT
AAAATGGGTCTAAAATACACTCAACTAGATATTTAATAAAGAGGCTTAAAAATGGGTCTAGATTATTTTTTAAATTTTTTTATAATAGGTCTTACAAGAAAAAGAAAGAGAAGGAATAAG
GGAATTAAAAAGGGGTTGAAGGCATTATTGGAGGTCAAATGTGCACATACATACTCACTCACGTTCCACAATTTTACTGACTTGAGGGGAATGAGTCTATGTTCTTTCCCGTACGTGTGG
GGAATTGAAGTAGATCTCTGTGGAAAAGTTAGGCCAAAGATTTTAGGGACATTGTAGATATTCTAATAAGAAGGGCATTTTAAGATTTATAAAACCTTAAAGTTTTAACATTGTGATGAT
CAATTACATTAAGTAGCTGACCAATTAGAATAATGTATTTAACATCACTAATTAGCGAATCACTTACCGTTACTATGGACTTAAAATTAAAATTAAAATTAAATATTTTTGTAAACATAA
GATTAAATTAAAATAAAATATAAGCAGTAGTATGCAGGCTTTTTGCTTCTCCAATTGAGACTAGTGTGCTTTTCTCACTGAGATTATGACGTGAAGTCATTCTCACAATTCACAAAGTAG
CTAACTTGATGTTACTTATAATTATTTCCTTTTTCTTCGGCATGAGCCTATTTTCAAACCTTGTCCCCCACTTTCGGTTTCACTTTTCTGGCATAATCGACCATCATGCAATGTAGTGGG
GCCATCCAATAATATCACGCAAAACACACACATTGAACAGAATAATTAATAAAAAAACACATCAAGGTTCATGTGTCATGCCTATATCTTATCTCTTTATAAGGAAAATCCCACATTATC
ATCTCTACCAAAACAAATAAGATAAGAGAAATTTTATGATATCTAAGAAATTTAAAGATTTTGATATTGAAACTTTCTTTTCATCCATCTTTCTTGATGTCTTAAAACTCCTTCAACTAT
TAATCCAAATTAAAAGCACTTACACCATAATCCTTAAATTTCTCTAGGTAACATAACAACTCTTGTGTATGAATAAAAATGTGTATGAAAATTGATATTTCCACTTACATAATTGTAATG
ATAATAAATTTATTAATTTTTATTGTAATTATGTTAAAATCAATAAAAGAAATATAGCTGTTTGGCTGAGTGTCAAATCATGGATTCACATTCTTCCAATACGTTTTATTATTGTTTTTA
GGTTATTTTATAAAATTGACATTTTTTTTTTACAAAAACACTCTCACATACATGTTAACCAAACACACTGACCCACCCACCACAGTTTTTAATTGATTGACACCGTAAAACATGTTTGGA
TGGGTGTTGGATCAAGTACATCCACGTTCTTCCAATGCATTTTACTATTGCTTCCTTGTCGTTTTATAAAATTAACATGATTTTTTTTTACAGAAATACAATTTCCATCAGTAAACCAAA
CAGTTGATGTTTACAGGGACAATGACCATTTATAATTTTTAATTGGCTGACACTATAAACATTTTTAGTACATCAAAAATTAAGGTGACAACAACTATATATGTCTTGATGACTCAATTA
TTATCATTAATTTTTTAAGGCATGGTGATTTGCATTACAGCTCTAGGAGGACCCTCATGGACAGTTCCTCTAGGAAGAAGAGATGCAAGAACAGCAAGCCAGAGTGCAGCCAACAACCAA
ATCCCAGGACCCTCCTCTGACCTCTCAACCCTAATCTCTATGTTTGCATCCAAAGGCCTAACAGCAAGTGACCTAACCGTTCTTTCAGGTGCCCACACAATAGGCCAAGCACAGTGCCAG
TTCTTTAGAACTCGCATATACAACGAAACCAACATCGACACCAACTTCGCCGCCACCAGAAAAACAACTTGCCCCGCCACCGGAGGGAACACCAACCTGGCCCCTCTGGAAACCCTAACC
CCGACACGATTCGACAACAATTACTACGCCGACCTCGTCAACCGCCGTGGCCTTCTCCACTCCGACCAGGTGCTTTTCAATGGTGGGTCTCAGGATTCCCTTGTGCGGAGCTACAGTGGC
AACAGTGCTGCATTTTCTAAGGACTTTGCTGCTGCCATGGTGAAGTTGGGCAATATTAGTCCCCTCACTGGGTCCAGTGGGGAGATCAGAAGGAATTGCAGGGTTGTGAATTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA