View Redoxidase 198

Entry information : AtPrx32 (At3g32980 / Atprxr3ge / AtP16)

Entry ID	198
Creation	2006-04-10 (Filippo Passardi)
Last sequence changes	2015-06-03 (Christophe Dunand)
Sequence status	complete
Reviewer	Achraf Jemmat
Last annotation changes	2015-11-04 (Achraf Jemmat)

Peroxidase information: AtPrx32 (At3g32980 / Atprxr3ge / AtP16)

Name (synonym)

AtPrx32 (At3g32980 / Atprxr3ge / AtP16)

Class

Class III peroxidase [Orthogroup: Prx040]

Taxonomy

Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis

Organism

Arabidopsis thaliana [TaxId: 3702 ]

Cellular localisation

N/D

Tissue types

Etiolated hypocotyls
Flowers
Mixed tissues
Roots
Rosettes
Seedling shoots

Inducers

Cold stress
Dark growth
Hormon treatment
Stress treatment

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	AtPrx32 start..stop	S start..stop
AlyPrx32	704	0	1..352	1..352
AhalPrx29	702	0	1..352	1..352
BstrPrx67	696	0	1..352	1..352
CrubPrx101	687	0	1..352	21..372

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '198' 'complement(join(13526404..13526873,13526947..13527115,13527616..13527807,13529722..13529949))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	13529722..13529949	226	N° 2	13527616..13527807	190	N° 3	13526947..13527115	167	N° 4	13526404..13526873	468
complement(join(13526404..13526873,13526947..13527115,13527616..13527807,1352972 2..13529949))

Literature and cross-references AtPrx32 (At3g32980 / Atprxr3ge / AtP16)

Protein ref.	UniProtKB: Q9LHB9
DNA ref.	Phytozome 12: Chr3 (13529949..13526404)
mRNA ref.	GenBank: NM_180321
Cluster/Prediction ref.	Phytozome Gene 12: 19659045 UniGene: At.47588
Omic ref.	ePlant: At3g32980 TAIR: At3g32980

Protein sequence: AtPrx32 (At3g32980 / Atprxr3ge / AtP16)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	352 (323)
PWM (Da):	38691.39 (35558.9)
PI (pH):	6.65 (6.50)	Peptide Signal:	cut: 30 range:30-352

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MNFSYSSLSTWTTLMTLGCLLLHSSISSAQLTPTFYDNTCPSVFT
IVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAAPNANSARGFPVIDRMKAAVETACPRTVSCADILTIAAQQAVNLAGGPSWRVPLGRRDSLQAFFALANTNLPAPFFTLPQLKASFQNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLNTTYLQTLRGQCPRNGNQTVLVDFDLRTPTVFDNKYYVNLKELKGLIQTDQELFSSPNATDTIPLVREYADGTQKFFNAFVEAMNRMGNI
TPLTGTQGQIRQNCRVVNSNSLLHDVVEIVDFVSSM

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 3, 3 introns), 7 cDNA and 232 ESTs (168 from roots), Also identified by proteomic (Feiz, 2004).

Promoter►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ACAGAAGAGA GAGAACTAAT TTCGTTATTA CGGTTCTCAG ATCTTCTAAT ATATTGTCTT CTATAGATAA ATATTTTGTT CATCCTAATA GTTTCATCAA GAATCCAAAG TCAATTGCTC ATTATTCCAC GAAATCTAAG GGGCAGCTAG AAACAAAGAA AATATGCTAA CGTGAAGAAG GCGAAAACTT GTCATTTTGA CGTTATAATA GAAATTCAAT TTTCCATCGC CGGGAAAAGA GGAAATGTAC AAAAATAAAT AAATAAAAAA TTTGAAACCG TTCACCTAAT TAGATAGCTA ATTGAAATTT AACAATAGTT TAAGCTGTCT TTCTGGACTC CATTCTTAAT TGACTTATTA TAGTTTTGAG CTTTAAGAAG AAAAAAAACA CTACTTACAA ATGCACTATT TTAGATACGT GTTATATGTA CCAAAGAAAA TTGCGACGAT ATTTGTTTAG TCGCAAATAT TAACAACTAT TTTAAGACCG TTGAGTGACT ATCCACGGCC ACGGTGCATA CATAGAATCG GAAAAAAGTT TCATATTAAC AACCATTTTG ATGCATATTT TAGATACTCT ATATATCGTC AGTGACACAT TATATAATTT ATACATCTTG AAACATAATA TAAATTTAAA CAAAATAAAT TGGTTAAAAC TTTTGTTTTC GAATTAAGTT GTGTTTAATG AATGATAGTG GTTTCATTTG CTCATTTTAT ATATAGATTT ACTGTTTTCA AGATATCTTA TAAAAAAACA TTTATATCAA AAAATTTATA AACTTAAAAG TTTGTTTTTT TTTGTCAAAG AGAATCTCCA AAAAAAAACT AAAGAAACCT ATCTACCATG TAAGGACCGG ATTTTAAAAT TTAGGCATTA AATATTTTTA TACCGAACCG GACCAAATAT ATTTGGTTTT AAGAGTTTTT AGCAAGATCG AACTAAGTTA CCCCGATTGA CAAGTCTACT TATTTGCAAG AAAATAAAGA AACTTTTTTT ATTTGTCATC TCAATAACTT ATATATAACA TATAAAAAAT TAGCGATTTA TTTAATCCCT AAAAAAGTAA CTTTAATATA TATTTTCAAA AAAGAAATTT TAACGAATAA AACAATTTAG ATAAGAAAGA ATTTGTCTCT TCGATAAGTA AGTTATATTT GAAGACAAAA AGTTTAGTTG CACGAAGCGT TAAGAATGTT TTATAAAAAA ATCTTAAAAC TATTATACTG AAACCACATT TATATAATCA CGATTTAAAT TGGGTTCTAG ATGATTTGTG ATTCTTTTTA TTTTGTAACC ACACTTGTTG TTGTTTGATA TTCTTGTTCC GTTGCTAGAA GTTGGACTCT AAAATATATT CATGTTAAAG CATATACAAT ATATTTTTAT ATTTATTTTC CACACTTCCA TTTTGCTAAT TTCAATTTTA GTTTTAATTT AGTGAGTCAA ATATTTTTCA ATTATCTATG AAATTCAAAG ATACATTTCG AAAGATGATT TTAATTATGT TATCTCATCA ATTATATTCA TAACTATAAT TATATATTTT AGGTGTACAG AAATAAATCA CTAATCGATG CATGTAAATG TTGATGTATA TGAATGTAGG CATTATGAAA TTCTTACTAA TATTTATGTC GTTAATTAAT GTTTGGATTT ATGTAGACAG CATACGTCCT ATAAACCAAG AGATGATTCA TCCTTTTTAT CATCCGGAAT TCGGGATCTA TTAATATTGT TTAGTGTTAA TATACAATTA AAAAAAAAGT TAGTGGTGAT ATACAGTGTA TACATTATTT TTTGAATGAA ATTTTACAGT GTAGGTTATT AAAAATAATT ATTAGAAATA GCTGTTGTTA AAAATAAAAA TATAACAATA GAATTAGTTC ACAAAATGTT ATGGACCCAT TCGGTCATTC
CCCTATAAAA GGATCCTTGA AGATATAGAG TTTCCTCATC TTCTCAAACT AAATCAATTA AAGAGGTTTC TTCTTATAGA A

Retrieve as FASTA

Terminator +►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

CATAACGTTG TCTCGATATA TGTGGCAACC AAAAATATGT TTTATGAAAT AAAGTGTTCT CAAAATGTTT ATGAAGAACA TTTCGTCTTA AATCTTTTCT GTCCTTCATG TTTTTCTTAT TACTTTTTCA AAGTAATCTA TCTACCCTCG ATTGATGGAA AATAGAACTG AAACGAATAG CATGGTTAAT TTACTTAAGA AATAATATGT AGTGTTTTTT TTTATATTTG TGAATCTAAA TATTTTAATG TTTACTATTC AAGAAATTTT AGATCTTTTT AGATTTTAAT GGATGATTGT TTGGATTATT TTCTCTTTTG TTTTGAAATC TTGATGTTAC TATTATCCAT GTATAAATAC AGTACTTCCA CTATATTTGA CAACAACAAA ACGTTATATA GATAAAATTA TTTAAAACTG TGCATTATAA AGGAAATTAT TATTAATTCA AGTATTATTT TAGAATTACA AATATTCATT TATATTTACC GTTATAACTA AATAAATTTT CTTATCAATA TAATTTCAGA CGTTTCACAT GTTATACGCA GAATTTAACA TTTTTACGTA ATTTTTTCTT ATAACCAGAA ATAATATTAT AAAATTCCTT TTTAACTACA TACGATGTTT AATTATGTTC TAAGTATTTA AGTTATTCGC AATACATTGT TGTTGTTTAT ATTAGTTGAT ACGAAAATGA ATTGATGGAG GCTTAGTTAA TTAGTTTTCA AGTTCAAAGG ACTTATATCT CTTAAAGGTG GGACCCACAC CATGTTGAAT TCATCTACTT TGGAGCGGAG ATCCCTCTCA ATCGGGCGTC GAAGCCAACA CTTCACTTGG AAGATTTAAT ATTGGGCCAA TACCACGTTG GTGATATTTG ATTAGTCTCT TTGCCTTATC TTGCTTTTTA AGATTTATGT TCAATTTGTA TCCAGCATGT GAGGAGCTAT CTAGATAGTG
AACGCAACAA ATAGAGTCTT AGTCTACATT TGATCCTAAG

Retrieve as FASTA

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGAATTTCTCTTATTCTTCCTTGTCAACTTGGACAACCCTAATGACATTGGGTTGTCTTCTGCTTCATTCATCCATTTCCAGTGCTCAGCTAACCCCAACTTTCTATGACAATACATGT
CCAAGCGTCTTTACCATCGTACGGGATACCATAGTAAACGAGCTAAGATCGGATCCTCGTATCGCTGCAAGCATCCTTCGTCTTCACTTCCACGACTGTTTCGTCAATGTAAGATATTAA
TTTTTCACCTTTTATGTTTTGGATATACAATTTGAAATACCTTTTCGTTTGAAATTGTATATGTCAGTATCTTTTACAATAACGTCCTTTAACGAAAGAAAGAAAAATCTTTTATAATTA
CATCAAAGACTCCCTTTTCAAATTTTTATAGTTACGTTAGTATTCGTTCTAACTATTTGTGTTATCAAGTTACTCTAATTTTCAGATTTGATAGGCTTGTAGTTATGATAATTGATTTCT
GATAAATATGGGATAATAGCGCCACTCAAGAAAAACCAGTTACGTCTTTGTCAGTTTTAAATAACACATGGTTTGTTGATAACTACAAAATGGAAACACGTGGTTTAGGGCTTTAGTATT
TACATAAATTATTATGGGAAAAAAATCAGAATGACCCAAAATTAATGGTTTAATTACTAAACTATCTCATAAATTGTAAAGGTTAATTGTGTTACAATTATGCTTTTAAAAAACTTTTTT
TTATATAGAAATTCTTTAAATATCTTTTATATGAATGACAAAAGTCAAAAATATATTTCAAAACTTTTCCATCGTAGAAAAATATTTTCCAAAAAAAAACTACAATGAAAAAAGTATGTG
GATCTACTTGTTATAAATTTATATATTTTCTACCACAAACTCATTTGCTGCGATATATCTATTTTGTGAGACTATTTTGTCCCACAGACTTTTATAATTTTGATAGATTTATTATAGTAC
GTGACATATTTTTTTTTAATAGTAATGTTATACTTATTATTTTTGACATAAATCTGCCATATGGTAAAAGATTTGTCTAATATAAAATAATATAATGATTAGAATGATGTTTAGTTATAA
CAGATTTGTTTTAGGTGATATATTTCTTTAATAATAACAAAAATATGACGTTTAATGACAATCTTTTATATTTGAATCCAATGATGATAGATTTATAGTTGCCACTGGCAAATTTTTAAA
TATAAGTTTGTTCAATGGTTACAGATTTTAATTGATAGATTCCTATTGAAACTTCAATATCATTTTACCAAACGCTTAAATTTTGTGGCTTAATATTTTAGGTTATGAGAGATTTGTTTC
AAAATCAGGGTTAAGCTTATTACGACAGATTTATCTTCTTTTTTTTTTAATTATTTAGAAAAACAAAAATGGGTTTTTGGTCTTTTGCTTCAATATTGGGACATGTTAAGTTTCTTCTAC
CTTTAGGTGTTAGTCTAGTTATTTTTGTTTAAATTTGGATCCAACTAGATAAATCTCAGTTTTATTAATTAGACCAATATTTATATGTTACCACACTTATAGGTCACTGGGCTAATTAAC
CACTCTGGTATATATATATCAATATAAAATTTACGGTAGTTAGACGTGATATTTTTGTTTTTTACTATCGAGTATCTTAGCTCTTGTCGTCAAATATGACTCATGCCTTTTAAAAAAATG
ATTTCACAACATTTAGTATAATTTGATCTCCCATTCAACGAACGTAAATTATCCGTATAATAATTTAAGAAAAGCATGGACCCGTACTGTACCAAACACGTTAGGAGTTTATATCAATCA
TTTATTGAATGTTACAAAATAACATATTAACATATTATATAAATCGTGTATTATTTATGGGAAGTTGATCAGATCGATGTAGTTGTTAACCTAAAACATAATGTTGAATTTATGCGTTAG
AAGATTAATATAATGTAAACTAAAATGTATACTAACTTGTTTACACTATATCACCACGCGTTGCTTAAAAAGAACAAACCTTTTTATTGAATGAAAATGCAATCTAACACTTTTTGTAGG
TATACTAAATATGTCATCATGAAAAGAAAAAACTATATATCATTATGATTTCAATATATGTTGACTAATTAATTAGTGAACACATAATTTTTGTTTGTATAGGGGGCTGTGATGCATCGA
TCCTGTTAGACAACACAACATCCTTTCGAACAGAGAAAGATGCGGCTCCAAACGCAAACTCGGCTCGAGGATTTCCAGTGATCGATAGAATGAAAGCAGCAGTAGAGACAGCATGTCCAA
GGACTGTTTCATGCGCAGATATACTTACCATCGCAGCTCAACAAGCTGTAAATTTGGTATGCACCATTAATTTATCTCTCTTTTTTCATTTATTATAAACATTGTCTCAAATTATTCTGT
TTAGTCGTCACGGATAACATATTAAAACATGACAACATACTATTAAAAATAAATATATGGACTGCTGAAGGTTGGAAGTTGTACCATTTAGATTTAATCAATAGTTATAAAAAGGCTATC
TACTATACCAGACATGTCTTTAAGATTAATTGTGAAAAATATTTAAAACGCATAGTGGATTGGTAATAATATCAAGTCTCATTACAATAACAAATTTCAATACAATAATAATATCAAGTC
TCCTTTTTTGGTAACTAAAAAGAATAGAATCATATTTTCTAAAATTTTGAAAAAATCCATGCATAACTTTGAGAATCTACTTGTTTAAAATTTATACTATACATTTGTCTTTTTGGTTTT
GTTCATAGTAAGACTTCGACATGGTAAGAATTACTTTCGTAAACAAATAATTGTTTTCTAAATATAAATGTTTTAGGCGCAGGAGGTCCTTCTTGGAGGGTTCCTTTGGGGAGAAGAGAT
AGCTTACAAGCATTCTTTGCTCTCGCTAATACAAATCTTCCCGCTCCATTCTTCACTCTCCCACAACTTAAGGCCAGTTTTCAAAATGTTGGACTTGACCGTCCCTCTGATCTCGTTGCA
CTCTCTGGTAATAAATTATTACGAGATATATTAAATAAGTTTAAATACTTTATTGTTAACGTATCGCTTATTTTGGTTAGGTGTGGTCACACATTTGGTAAAAACCAGTGCCAATTTATT
ATGGATAGACTATACAACTTTAGCAACACTGGTTTACCCGACCCTACTCTTAATACTACATACCTCCAGACACTTCGTGGACAATGTCCCCGCAATGGTAACCAGACCGTCTTAGTTGAT
TTCGATCTACGCACACCGACGGTTTTTGACAATAAATACTATGTGAATCTGAAAGAGCTAAAGGGACTTATCCAGACGGATCAAGAGTTGTTTTCCAGCCCTAATGCCACTGACACAATC
CCCTTGGTGAGAGAATACGCTGATGGCACTCAAAAATTCTTCAATGCTTTTGTGGAAGCAATGAATAGAATGGGAAACATTACACCTCTCACTGGAACTCAAGGACAAATCAGACAGAAT
TGTAGGGTGGTTAACTCCAACTCGCTGCTACATGATGTGGTCGAAATCGTTGACTTTGTCAGCTCTATGTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

CCTCATCTTC TCAAACTAAA TCAATTAAAG AGGTTTCTTC TTATAGAAAT GAATTTCTCT TATTCTTCCT TGTCAACTTG GACAACCCTA ATGACATTGG GTTGTCTTCT GCTTCATTCA TCCATTTCCA GTGCTCAGCT AACCCCAACT TTCTATGACA ATACATGTCC AAGCGTCTTT ACCATCGTAC GGGATACCAT AGTAAACGAG CTAAGATCGG ATCCTCGTAT CGCTGCAAGC ATCCTTCGTC TTCACTTCCA CGACTGTTTC GTCAATGGCT GTGATGCATC GATCCTGTTA GACAACACAA CATCCTTTCG AACAGAGAAA GATGCGGCTC CAAACGCAAA CTCGGCTCGA GGATTTCCAG TGATCGATAG AATGAAAGCA GCAGTAGAGA CAGCATGTCC AAGGACTGTT TCATGCGCAG ATATACTTAC CATCGCAGCT CAACAAGCTG TAAATTTGGC AGGAGGTCCT TCTTGGAGGG TTCCTTTGGG GAGAAGAGAT AGCTTACAAG CATTCTTTGC TCTCGCTAAT ACAAATCTTC CCGCTCCATT CTTCACTCTC CCACAACTTA AGGCCAGTTT TCAAAATGTT GGACTTGACC GTCCCTCTGA TCTCGTTGCA CTCTCTGGTG GTCACACATT TGGTAAAAAC CAGTGCCAAT TTATTATGGA TAGACTATAC AACTTTAGCA ACACTGGTTT ACCCGACCCT ACTCTTAATA CTACATACCT CCAGACACTT CGTGGACAAT GTCCCCGCAA TGGTAACCAG ACCGTCTTAG TTGATTTCGA TCTACGCACA CCGACGGTTT TTGACAATAA ATACTATGTG AATCTGAAAG AGCTAAAGGG ACTTATCCAG ACGGATCAAG AGTTGTTTTC CAGCCCTAAT GCCACTGACA CAATCCCCTT GGTGAGAGAA TACGCTGATG GCACTCAAAA ATTCTTCAAT GCTTTTGTGG AAGCAATGAA TAGAATGGGA AACATTACAC CTCTCACTGG AACTCAAGGA CAAATCAGAC AGAATTGTAG GGTGGTTAAC TCCAACTCGC TGCTACATGA TGTGGTCGAA ATCGTTGACT TTGTCAGCTC TATGTAACAT AACGTTGTCT CGATATATGT GGCAACCAAA AATATGTTTT ATGAAATAAA GTGTTCTCAA AATGTTTATG AAGAACATTT CGTCTTAAAT CTTTTCTGTC CTTCATGTTT TTCTTATTAC TTTTTCAAAG TAATCTATCT ACCCTCGATT GATGGAAAAT AGAACTGAAA CGAATAGCAT GGTTAATTTA CTTAAGAAAT AATATGTAGT
GTTTTTTTTT ATATTTGTGA ATCTAAATAT TTTAATGTTT ACTATTCAAG AAATTTTAGA TCTTTTTAGA TTTTAATGGA TGATTGTTTG GATT

Retrieve as FASTA