Entry information : PtaPrx04(PTA00069323)
Entry ID 2038
Creation 2007-02-14 (Christophe Dunand)
Last sequence changes 2007-02-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-28 (Christophe Dunand)
Peroxidase information: PtaPrx04(PTA00069323)
Name PtaPrx04(PTA00069323)
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue types Roots
Xylem
Inducer Drought
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx04
start..stop
S start..stop
PgPrx31 599 0 35..371 1..340
GbPrx37 459 2e-163 47..368 6..327
CmichPrx14 455 2e-161 70..368 42..343
PtaPrx41 448 5e-159 40..368 2..331
Literature and cross-references PtaPrx04(PTA00069323)
Literature Sederoff,R., Molecular Basis of Wood Formation in the Pine Megagenome, unpublished
EST ref. GenBank:   DR694810.1 [5' end]   DT624683.1 [3' end]
Cluster/Prediction ref. UniGene:   Pta.6018
Protein sequence: PtaPrx04(PTA00069323)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   371
PWM (Da):   %s   40149.95  
PI (pH):   %s   5.19
Sequence
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Send to Peroxiscan
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MPVPLTFLHC NSLLPLPFSS PIFPLTVAES QVNQMTMHSS SSNSNGSLWM VVMVLTVTAQ LVLAQQQQLL SVDYYNSSCP QLESIIFKVM VRKQRANPTT AAGTLRIFFH DCFVEGCDAS  VLVSSMGAGH KAERDADINL SLPGDGFDAV ARAKTAVEAQ CPGVVSCADI LTIATRDLIT LVGGPKYQVK KGRKDGLVSE ASRVAGNLPE ATMSVDELNA LFESKGFNQS EMTTLSGAHT  VGFSHCKEFM GRIYKEPMDP TIDPQYAAGL QKVCPQQNLD PNMAAFNDVL SPRTFDNVFY QNLPKGLGLL ASDQILYTDA RTIGLVETYA SDQDAFFRDF ALAMDKLGSV GVKTGYEGEI 
RKSCDAFNKH S 

Retrieve as FASTA  
Remarks Complete sequence from genomic and 29 ESTs.
DNA
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ATGCCCGTGC CTTTAACCTT CCTGCATTGC AATTCCCTGT TGCCATTGCC ATTTTCTAGC CCCATATTCC CATTGACAGT TGCAGAATCA CAAGTTAACC AGATGACAAT GCACAGCAGC  AGCAGCAACA GTAATGGCTC TCTGTGGATG GTGGTCATGG TCCTAACAGT AACAGCACAG CTGGTTCTTG CTCAACAGCA ACAGTTACTC TCGGTGGATT ACTACAACTC GTCGTGCCCG  CAACTGGAAA GCATCATTTT CAAGGTAATG GTGCGCAAGC AGAGGGCCAA CCCAACTACA GCAGCGGGGA CTCTGCGCAT TTTCTTCCAT GACTGCTTTG TTGAAGTAAG TGGGGTGGCT  TAGCTAGGCG ATTACTGTTA TTGAACTTGG GTTGGCTTGG CTGTTGCTAG ATATTGATGT GTCTTGGTAT TTGCAGGGGT GCGATGCATC GGTGCTAGTG TCGTCGATGG GTGCTGGTCA  CAAGGCGGAG CGGGACGCAG ACATCAATCT ATCGTTGCCC GGCGACGGAT TCGACGCGGT CGCCCGAGCA AAGACCGCGG TTGAAGCTCA GTGCCCTGGT GTCGTCTCAT GTGCAGACAT  TCTCACCATT GCAACCAGAG ATCTCATTAC TCTGGTAACT AGCCTTAAAC CTTTCTTTGG AAAACGTAGT GCCTGGTAAT TTCAAGGGAA CTGGCTTGAC TGAACTTAAA TTTCAAGGGA  TTTGACTATA ATATGCCTTG TAAACTCTCC CTCCCCATTA CCAGGGCCAT TGGCAAAGAT GCCTCTGTAG AATGGTCCAA GTGAGTGGGC AATAGTCCAA GGGAACTAAT TCTGATTGTT  AATCAATTTA TATTTTTCTA GTTTATGATC TTTTTCCATT TTAATTTTGA TCTTGATCTT CTCTTGCACA AAATGATCCA ACAGATTGAG CTAATCCATC CATAAATATT AAATATTCAT  TTCTTTTTGA CCTCCCATCT TCTCTGCATC CTCATTGAAG AATACTCCAA CAGATTGAGC CAGTTCTTAA GGTTAAATCA TATTATGATA GTTTCCTTCG TCTTCTCTTT GACAAAATGA  TCCAACAGAT TGAGCTAATC CATCCATAAA TATTAAATAT TCATTTCTTT GTGACCTCCC ATCTTCTCTG CAACCTCATT GAAGAATGGT CCAAAAGGTT GAGCCAGTTC TTAAGGTTAA  ATCATATTAT GTTGGTTTCC TTTGTGACCT GGCATCCCCA GGGCAATATG ACACTGATTG AGCTATTCCT CTAGTCCCAA AGGTTAATTC ATTTCTGTTT TTTTGGCATG TCAATCTGCT  GGCCATCCCC ATGGCAACAT TTGTCATTGG GTAATGGTCT TAGTGATTAA GATCATCTTT ATGTGCGTTC TTTCTACCCA TACAATCTTC AATATACCTT TGGCAAATGG TCCAGCCGGT  TGAACTAAAT CAATATATGT TCTTCACCTT TATTGGTTTG TTTATGTGAA TATATTTCAT TTCTTTGTGA CCTCCATGTT GTTTTCCTTT GTGACCTGGC ATCCCCAGGG CAATATGCCG  GTGATTGAGC TAATCCTCTA GTCCTAAACG TCAATTCATT TATGTTTTTT TCACCTCTCC ATCTCCTGGC CACTCCATGG CAACATTTGT CTTTGGTTAA TGGTCTTAGT GATTAAGATA  ATCTTTATGT GCCTTCTTTC TAGCCATACC CTCTGCAATA TACCTTCCGC AAATGGTCCA GCAGGTTGAA CTAATACTTA ATCAATATAT GTTCTTCACC TTTATTTCTT TCACTGGTTT  GTTTATGTGG GTATATTGTA CATAATCGCA GGTAGGGGGG CCAAAGTACC AGGTCAAGAA GGGGCGCAAA GATGGTCTTG TCTCAGAAGC CTCTCGAGTC GCAGGCAATC TCCCAGAAGC  AACGATGAGC GTGGACGAGC TAAACGCCTT GTTCGAATCC AAGGGCTTCA ATCAGTCGGA AATGACAACG CTCTCAGGAG CTCACACCGT GGGCTTCTCG CATTGTAAGG AGTTCATGGG  GAGGATCTAC AAGGAACCCA TGGATCCCAC CATCGATCCT CAATACGCTG CGGGCCTGCA AAAGGTCTGC CCCCAGCAGA ACCTCGATCC CAACATGGCC GCCTTCAACG ATGTCCTTTC  TCCCAGGACT TTCGATAATG TTTTCTATCA GAATCTGCCA AAGGGTTTGG GCTTGCTGGC CTCTGATCAG ATCCTCTACA CCGATGCTCG GACCATTGGC CTCGTGGAAA CATATGCTTC  CGACCAAGAT GCTTTCTTCC GGGACTTTGC GCTTGCCATG GATAAGCTCG GCAGCGTGGG CGTTAAAACA GGCTACGAGG GAGAGATCAG AAAGTCCTGC GATGCTTTCA ATAAACACAG 
TTAG 

Retrieve as FASTA  
CDS
Send to BLAST
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ATGCCCGTGC CTTTAACCTT CCTGCATTGC AATTCCCTGT TGCCATTGCC ATTTTCTAGC CCCATATTCC CATTGACAGT TGCAGAATCA CAAGTTAACC AGATGACAAT GCACAGCAGC  AGCAGCAACA GTAATGGCTC TCTGTGGATG GTGGTCATGG TCCTAACAGT AACAGCACAG CTGGTTCTTG CTCAACAGCA ACAGTTACTC TCGGTGGATT ACTACAACTC GTCGTGCCCG  CAACTGGAAA GCATCATTTT CAAGGTAATG GTGCGCAAGC AGAGGGCCAA CCCAACTACA GCAGCGGGGA CTCTGCGCAT TTTCTTCCAT GACTGCTTTG TTGAAGGGTG CGATGCATCG  GTGCTAGTGT CGTCGATGGG TGCTGGTCAC AAGGCGGAGC GGGACGCAGA CATCAATCTA TCGTTGCCCG GCGACGGATT CGACGCGGTC GCCCGAGCAA AGACCGCGGT TGAAGCTCAG  TGCCCTGGTG TCGTCTCATG TGCAGACATT CTCACCATTG CAACCAGAGA TCTCATTACT CTGGTAGGGG GGCCAAAGTA CCAGGTCAAG AAGGGGCGCA AAGATGGTCT TGTCTCAGAA  GCCTCTCGAG TCGCAGGCAA TCTCCCAGAA GCAACGATGA GCGTGGACGA GCTAAACGCC TTGTTCGAAT CCAAGGGCTT CAATCAGTCG GAAATGACAA CGCTCTCAGG AGCTCACACC  GTGGGCTTCT CGCATTGTAA GGAGTTCATG GGGAGGATCT ACAAGGAACC CATGGATCCC ACCATCGATC CTCAATACGC TGCGGGCCTG CAAAAGGTCT GCCCCCAGCA GAACCTCGAT  CCCAACATGG CCGCCTTCAA CGATGTCCTT TCTCCCAGGA CTTTCGATAA TGTTTTCTAT CAGAATCTGC CAAAGGGTTT GGGCTTGCTG GCCTCTGATC AGATCCTCTA CACCGATGCT  CGGACCATTG GCCTCGTGGA AACATATGCT TCCGACCAAG ATGCTTTCTT CCGGGACTTT GCGCTTGCCA TGGATAAGCT CGGCAGCGTG GGCGTTAAAA CAGGCTACGA GGGAGAGATC 
AGAAAGTCCT GCGATGCTTT CAATAAACAC AGTTAG 

Retrieve as FASTA