Entry information : PtaPrx05(PTA00009048)
Entry ID 2039
Creation 2007-02-14 (Christophe Dunand)
Last sequence changes 2007-02-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2021-04-08 (Christophe Dunand)
Peroxidase information: PtaPrx05(PTA00009048)
Name PtaPrx05(PTA00009048)
Class Class III peroxidase    [Orthogroup: Prx024]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type Roots
Inducer Drought
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx05
start..stop
S start..stop
PabPrx65 587 0 1..328 1..328
PabPrx211 541 0 1..328 1..327
PabPrx153 525 0 1..327 1..327
PtaPrx25-3 501 1e-180 1..328 1..329
Literature and cross-references PtaPrx05(PTA00009048)
Literature Pratt,L. et al., An EST database from drought-stressed loblolly pine (Pinus taeda) roots, unpublished
EST ref. GenBank:   CF394286 [5' end]   CF394196.1 [3' end]
Cluster/Prediction ref. UniGene:   Pta.12841
Protein sequence: PtaPrx05(PTA00009048)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   328 (312)
PWM (Da):   %s   34872.85 (33206.8) Transmb domain:   %s   i5-27o
PI (pH):   %s   4.78 (4.69) Peptide Signal:   %s   cut: 17 range:17-328
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGKLLIFLGI LLVALASIPA IPAEFPTPLL SVDYYEKTCP LAVTIVSEEM QLATLKEARM AASILRLHFH DCFVQGCDAS VLLDDTPTFK GEKTANPNVN SIRGFEVIDA IKERLETACP  GVVSCADILA LAARDGVVLS GGPYWDVPVG RKDSTTASLV EANTNIPMPN ATIESLIGKF LVQGLSVTDM VALVGGHTIG QARCTSFRQR LYNDPNAGND LYLSGLKAIC PVSGGDDNLS 
PLDHVSPTLF DNSYYINLVK GEGLLPSDQE MHSSGLGSIT GHIVKEYATD PLGFAKDFSD SIVKMGNIVN PATLLAGEVR KNCRIVNQ 

Retrieve as FASTA  
Remarks Complete sequence from genomicand 4 ESTs. (incorrect prediction, PTA00009048 contains three ORFs (2 pseudo CIII PRx))
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGCAAAC TTCTTATTTT CTTAGGGATT TTGCTTGTGG CTTTGGCATC CATTCCTGCA ATTCCTGCAG AATTTCCAAC TCCATTGTTG TCTGTAGATT ATTACGAGAA GACATGCCCC  CTTGCAGTTA CCATTGTAAG CGAGGAGATG CAATTAGCAA CGTTGAAAGA AGCTCGTATG GCAGCTTCCA TACTTCGTCT GCATTTTCAC GACTGCTTTG TTCAGGTATT TTGTTTATAT  ATATATCATG GTGAATCTAT AGATTTGGGT TAACTTTCTA GATTAAATTT AATCAAGATA ATATTTAGTA GTTTTTAAGT TAAATATACT AAATAGTTAT GACTTAACCA GAGTTCGAAA  TTTTATAAAA GTTTTGAATT TATTACTTAA CAAGAGTCCG AGAATCTATA AAAGTTTTGA ATTTATTACA ATGAGCCAAA AATATTTTTG ACGTTAAAAT TTAAAACTAG GTGAAAAAAT  AACATTCTAT CGTAGTCTAA ACCCAAAATA TTAATATCTT AATTTACTTC TGAGTTTTAG TCGTTACTAA AATATTTGGA ATTAATGCAG GGCTGCGATG CGTCTGTGCT GTTGGATGAC  ACGCCAACGT TTAAAGGCGA GAAAACAGCA AATCCAAATG TAAATTCGAT CAGAGGATTT GAAGTTATAG ATGCCATCAA GGAAAGACTG GAGACTGCGT GCCCCGGTGT TGTGTCTTGT  GCTGACATAC TTGCGCTCGC TGCTCGAGAT GGAGTAGTAC TGGTATACCA TCTTCATATT AATAACCATA GCCCTATTAA ATATCAGATC TATAGATCAG TGTTAACTTT GTTATACATC  CATCTCAACT ATATTTCCTG TTTCTCAGTC TGGAGGGCCA TACTGGGACG TTCCCGTGGG AAGAAAGGAC TCGACAACCG CCAGTTTGGT TGAGGCGAAC ACCAATATTC CCATGCCCAA  TGCAACTATC GAGAGTCTCA TTGGAAAGTT TTTAGTGCAA GGCCTGTCAG TCACAGATAT GGTCGCACTG GTTGGTAAGT AAATGTTGAA TTTATGTGAA TTGTAAATTT CTGGAATATT  TCAGATTATT TTTAATCTGA AGATATAGAG GGGTCAAATA ATTTATCATT TTTTTAAATA TCAGATTCCA AAATACTTTT TAAATTTGTA ATAAGACGTA AAGAATGTCA TGTTTTTATC  CAAAATCTAA ACTTGATATA AAAATATCAC TTTTGTTAAC GTTTCTAGGG TTGCCCATTG TGCACAGGGG GTCACACAAT TGGACAAGCT CGATGCACAA GTTTTAGGCA AAGGCTTTAT  AATGACCCGA ATGCAGGTAA TGATCTCTAT TTATCTGGAT TGAAAGCGAT CTGCCCTGTA TCTGGTGGAG ATGACAACTT GTCACCGTTG GATCATGTCA GCCCCACGCT GTTCGATAAT  TCATATTACA TTAATTTAGT GAAAGGAGAA GGGCTCCTCC CCTCTGACCA AGAGATGCAT TCAAGTGGCC TGGGAAGCAT AACAGGGCAT ATTGTCAAAG AGTATGCCAC TGACCCTCTC 
GGATTTGCCA AGGACTTCTC GGACTCAATA GTGAAGATGG GAAATATAGT GAATCCTGCA ACACTACTGG CTGGTGAAGT GAGAAAGAAC TGCCGCATAG TGAACCAATA A 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGCAAAC TTCTTATTTT CTTAGGGATT TTGCTTGTGG CTTTGGCATC CATTCCTGCA ATTCCTGCAG AATTTCCAAC TCCATTGTTG TCTGTAGATT ATTACGAGAA GACATGCCCC  CTTGCAGTTA CCATTGTAAG CGAGGAGATG CAATTAGCAA CGTTGAAAGA AGCTCGTATG GCAGCTTCCA TACTTCGTCT GCATTTTCAC GACTGCTTTG TTCAGGGCTG CGATGCGTCT  GTGCTGTTGG ATGACACGCC AACGTTTAAA GGCGAGAAAA CAGCAAATCC AAATGTAAAT TCGATCAGAG GATTTGAAGT TATAGATGCC ATCAAGGAAA GACTGGAGAC TGCGTGCCCC  GGTGTTGTGT CTTGTGCTGA CATACTTGCG CTCGCTGCTC GAGATGGAGT AGTACTGTCT GGAGGGCCAT ACTGGGACGT TCCCGTGGGA AGAAAGGACT CGACAACCGC CAGTTTGGTT  GAGGCGAACA CCAATATTCC CATGCCCAAT GCAACTATCG AGAGTCTCAT TGGAAAGTTT TTAGTGCAAG GCCTGTCAGT CACAGATATG GTCGCACTGG TTGGGGGTCA CACAATTGGA  CAAGCTCGAT GCACAAGTTT TAGGCAAAGG CTTTATAATG ACCCGAATGC AGGTAATGAT CTCTATTTAT CTGGATTGAA AGCGATCTGC CCTGTATCTG GTGGAGATGA CAACTTGTCA  CCGTTGGATC ATGTCAGCCC CACGCTGTTC GATAATTCAT ATTACATTAA TTTAGTGAAA GGAGAAGGGC TCCTCCCCTC TGACCAAGAG ATGCATTCAA GTGGCCTGGG AAGCATAACA  GGGCATATTG TCAAAGAGTA TGCCACTGAC CCTCTCGGAT TTGCCAAGGA CTTCTCGGAC TCAATAGTGA AGATGGGAAA TATAGTGAAT CCTGCAACAC TACTGGCTGG TGAAGTGAGA 
AAGAACTGCC GCATAGTGAA CCAATAA 

Retrieve as FASTA