Entry information : PtaPrx10(PTA00011723)
Entry ID 2044
Creation 2007-08-31 (Christophe Dunand)
Last sequence changes 2007-08-31 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-31 (Christophe Dunand)
Peroxidase information: PtaPrx10(PTA00011723)
Name PtaPrx10(PTA00011723)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx10
start..stop
S start..stop
PtaPrx67 636 0 1..343 1..343
PabPrx105 634 0 1..343 1..343
PtaPrx87 624 0 1..343 1..343
PabPrx28 604 0 4..343 1..345
Literature and cross-references PtaPrx10(PTA00011723)
Literature Pratt,L. et al., An EST database from well-watered loblolly pine (Pinus taeda) roots, unpublished
EST ref. GenBank:   FJ078270.1 [Fragment]
Protein sequence: PtaPrx10(PTA00011723)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   343 (308)
PWM (Da):   %s   37602.01 (33611.7)  
PI (pH):   %s   8.14 (7.07) Peptide Signal:   %s   cut: 27 range:27-334
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MRIMALTISP RPSLIPLLLL CSLQVFVSSF RLSYPQPSNN LIPHFYDHSC PMAEQIIKSV VEKAVMKEAR MAASLLRLHF HDCFVKGCDA SLLLDDSGSI ASEKRSNPNR NSARGFEVVD  QIKSELEKAC PKTVSCADIL AITARDSVVL SGGLGWEVLL GRRDSRSASL SGSNNNIPAP NSTLQTLITK FKRQGLDEVD LVALSGSHTI GQSRCTSFRQ RLYNQSGNGQ PDSSLDKSYY 
SRLISGCPKS GGDNNLSPLD FVSPTKFDNY YFKNLLSGYG LLNSDEELFA KGQGKTMETV KAYAENEELF LQQFAESLVK MGNISPLTGT MGDIRTNCRT VLS* 

Retrieve as FASTA  
Remarks Complete sequence from genomic and 10 ESTs. Few mismatches between ESTs and DNA .
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAGAATCA TGGCATTAAC TATTTCCCCC CGCCCCTCTC TTATCCCTCT TTTGCTCCTT TGTTCCCTGC AGGTGTTCGT ATCATCATTC CGACTATCCT ATCCGCAACC TTCCAATAAT  TTGATTCCAC ATTTTTATGA CCATTCATGT CCTATGGCCG AACAAATAAT AAAATCGGTC GTGGAGAAGG CCGTGATGAA GGAGGCTCGA ATGGCGGCTT CCTTACTCAG GCTTCACTTC  CATGATTGTT TTGTCAAGGT CAGCATTCTT TTCGTCATGC AGATTGATCT AATTGCATTG AATAATGGCT ACTGATGAAT CAGTAGAAAT AAAATGTATG TGTTAATGTG CGAAATTTTA  ATGTCATGAC AGGGGTGCGA CGCATCTTTG CTACTAGATG ACAGTGGAAG CATTGCGAGT GAGAAGAGAT CGAATCCCAA CAGAAATTCT GCAAGAGGAT TTGAGGTCGT TGATCAGATT  AAGAGTGAAC TAGAAAAGGC GTGCCCAAAA ACTGTATCAT GTGCAGATAT TCTTGCTATT ACAGCTCGTG ACTCAGTGGT CCTAGTAATA CACCTTACTG GCCAGTATCT CATTCTTTCA  AAATAACATA TTTTGCTATC ACTTGATTTC CATTGCAATA TTTTAATCTA GTAAATAATA GTACTTGCTG ATGTGTTATG ATTGAATAAT ATCAGAGTGG AGGTCTGGGC TGGGAGGTTT  TACTGGGGAG AAGAGACTCG AGGAGTGCAA GTTTGAGTGG GTCCAACAAC AATATCCCAG CGCCCAACTC AACTCTCCAG ACACTCATTA CTAAGTTTAA ACGCCAGGGT CTGGATGAGG  TAGATTTGGT GGCCCTTTCA GGTATATATA TTTTATTTAT AACTTGCAGC GTCATAATTT ACAGTTCAAT CATTTCATTT TGTAGCATTC AATATTAAGT GGAGATTATT AAGTAGTCAA  ATACAAATAC AAATGCTAAT TACGCAGGAA GTCACACGAT CGGCCAATCT CGATGCACAA GTTTCCGGCA GAGGCTTTAC AACCAGAGTG GAAATGGGCA GCCAGACTCC AGCCTGGACA  AATCTTACTA CAGTCGGCTT ATATCTGGGT GTCCAAAATC GGGAGGAGAT AATAACTTGT CCCCATTGGA TTTTGTGAGT CCTACGAAAT TCGACAACTA CTACTTCAAG AACTTGCTGA  GCGGGTATGG ACTGTTGAAC TCAGACGAAG AATTGTTCGC CAAGGGCCAA GGGAAGACCA TGGAAACAGT GAAAGCTTAC GCAGAAAATG AAGAGCTCTT TCTCCAACAG TTTGCGGAAT 
CATTGGTGAA GATGGGGAAC ATCAGCCCTC TTACAGGCAC CATGGGAGAT ATCAGGACCA ATTGTCGTAC TGTTCTCAGT TGA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAGAATCA TGGCATTAAC TATTTCCCCC CGCCCCTCTC TTATCCCTCT TTTGCTCCTT TGTTCCCTGC AGGTGTTCGT ATCATCATTC CGACTATCCT ATCCGCAACC TTCCAATAAT  TTGATTCCAC ATTTTTATGA CCATTCATGT CCTATGGCCG AACAAATAAT AAAATCGGTC GTGGAGAAGG CCGTGATGAA GGAGGCTCGA ATGGCGGCTT CCTTACTCAG GCTTCACTTC  CATGATTGTT TTGTCAAGGG GTGCGACGCA TCTTTGCTAC TAGATGACAG TGGAAGCATT GCGAGTGAGA AGAGATCGAA TCCCAACAGA AATTCTGCAA GAGGATTTGA GGTCGTTGAT  CAGATTAAGA GTGAACTAGA AAAGGCGTGC CCAAAAACTG TATCATGTGC AGATATTCTT GCTATTACAG CTCGTGACTC AGTGGTCCTA AGTGGAGGTC TGGGCTGGGA GGTTTTACTG  GGGAGAAGAG ACTCGAGGAG TGCAAGTTTG AGTGGGTCCA ACAACAATAT CCCAGCGCCC AACTCAACTC TCCAGACACT CATTACTAAG TTTAAACGCC AGGGTCTGGA TGAGGTAGAT  TTGGTGGCCC TTTCAGGAAG TCACACGATC GGCCAATCTC GATGCACAAG TTTCCGGCAG AGGCTTTACA ACCAGAGTGG AAATGGGCAG CCAGACTCCA GCCTGGACAA ATCTTACTAC  AGTCGGCTTA TATCTGGGTG TCCAAAATCG GGAGGAGATA ATAACTTGTC CCCATTGGAT TTTGTGAGTC CTACGAAATT CGACAACTAC TACTTCAAGA ACTTGCTGAG CGGGTATGGA  CTGTTGAACT CAGACGAAGA ATTGTTCGCC AAGGGCCAAG GGAAGACCAT GGAAACAGTG AAAGCTTACG CAGAAAATGA AGAGCTCTTT CTCCAACAGT TTGCGGAATC ATTGGTGAAG 
ATGGGGAACA TCAGCCCTCT TACAGGCACC ATGGGAGATA TCAGGACCAA TTGTCGTACT GTTCTCAGTT GA 

Retrieve as FASTA