Entry information : PtaPrx11(PTA00083200)
Entry ID 2046
Creation 2007-08-31 (Christophe Dunand)
Last sequence changes 2007-08-31 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2021-04-08 (Christophe Dunand)
Peroxidase information: PtaPrx11(PTA00083200)
Name PtaPrx11(PTA00083200)
Class Class III peroxidase    [Orthogroup: Prx009]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx11
start..stop
S start..stop
PtaPrx51 608 0 1..326 1..326
PtaPrx49 600 0 1..326 1..326
PabPrx122 547 0 1..326 1..326
PabPrx108 546 0 1..326 1..326
Literature and cross-references PtaPrx11(PTA00083200)
Literature Pratt,L. et al., An EST database from untreated loblolly pine (Pinus taeda) roots, unpublished
EST ref. GenBank:   CF663152.1 [3' end]   CF663228.1 [Fragment]
Cluster/Prediction ref. UniGene:   Pta.22715 [5' end]
Protein sequence: PtaPrx11(PTA00083200)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (302)
PWM (Da):   %s   35167.92 (32511.5) Transmb domain:   %s   i9-31o
PI (pH):   %s   8.63 (8.90) Peptide Signal:   %s   cut: 25 range:25-326
Sequence
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Send to Peroxiscan
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METITVRNLF IALAGIWVFL CVSADAVGGL SLNFYEKTCP VVNNAVKNVV GQYISKNPTL AAPLLRLHFH DCFVRGCDGS VLLNSTNSTK AEKDALPNQS LRGFQIIDTV KAAVEKVCPG  VVSCADILAL VARDAVHMLG GPFWNVPTGR RDGVVSIKKE ALTKLPPPTG NFSQLTSIFA SNGLDVKDLV VLSGAHTIGI SHCSSFSNRL YNFTGKGDMD PSLNKHYAAK LKLQCKPGYK 
NTTVEMDPGS FRTFDTHYYT NLMKHKGLFQ SDAALLTNSE VQAFVNIESE GSSFFSDFTV SMEKMGRIGA LTGTAGQIRR HCALTN 

Retrieve as FASTA  
Remarks Complete sequence from genomic and 4 ESTs (2 unigenes and CF663228.1, mismatches) .
DNA
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ATGGAGACAA TTACCGTTAG AAATCTGTTT ATTGCACTTG CGGGTATATG GGTATTTCTC TGTGTATCTG CAGATGCAGT TGGAGGACTG TCACTGAACT TCTATGAGAA AACCTGTCCC  GTAGTTAATA ATGCAGTAAA AAATGTTGTT GGACAGTACA TATCCAAAAA CCCAACTCTG GCCGCCCCTC TACTCAGATT ACATTTTCAT GACTGCTTTG TCAGAGTGAG TATTATGCGT  TTATAAGTAT AGAGAGTTGT TAACTTCCGA TCTGAATTCT CCAGACACTT ACATATTTTT GGGATTAATA ATTTGACATG TTTAACTGGC TGAAGGGTTG CGATGGATCG GTGCTCTTGA  ATTCAACAAA TTCAACTAAA GCAGAAAAGG ATGCGCTTCC GAATCAGAGT CTGAGAGGAT TCCAAATAAT TGACACAGTC AAAGCTGCAG TGGAGAAAGT GTGCCCAGGT GTGGTGTCAT  GCGCCGATAT TCTTGCACTC GTCGCACGAG ATGCTGTCCA TATGGTAAAA CTCATGTTCA GCCTAATGAA TTTCTTGATT TCCTTTACCG TTCTGTTTTG CTCAACAGCC TCTAAGATGA  TATATAATTC ATGGAAATAC CAGTTGGGTG GACCATTCTG GAATGTTCCA ACAGGACGCA GAGATGGAGT GGTGTCTATC AAGAAAGAAG CTCTCACTAA ACTTCCTCCC CCCACTGGGA  ATTTCTCCCA ACTCACATCA ATATTTGCCA GCAATGGTCT TGATGTTAAA GACCTTGTTG TCTTATCAGG TAATTAATTC TCTACATTGT AATTGTGAAT AGAGATCCAA AATTCCAGAA  GAACAAACCA TTTAACATCA TGAGCACCAT GCCCACTCAA ATCACTTAGG TTCACATTAT GGCATCTTAA GCTGATCAGT TGTATAACAA TGCTGCCTGC AGGTGCCCAC ACTATAGGGA  TATCCCACTG CAGCTCCTTT AGCAACCGGC TTTACAATTT TACAGGAAAG GGAGATATGG ATCCGTCCTT GAACAAGCAT TATGCAGCTA AACTGAAGTT ACAATGCAAG CCAGGGTACA  AAAATACAAC GGTAGAGATG GATCCCGGCA GCTTTCGAAC ATTTGATACG CATTACTACA CCAATCTAAT GAAGCACAAA GGCCTCTTTC AATCCGATGC CGCACTTCTG ACCAACAGCG  AGGTACAAGC GTTTGTCAAT ATAGAATCGG AGGGCTCGTC GTTCTTCTCA GATTTTACAG TGTCTATGGA GAAGATGGGC AGAATCGGTG CGCTCACAGG CACTGCAGGA CAAATACGAC 
GACACTGTGC ACTTACAAAT TAA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAGACAA TTACCGTTAG AAATCTGTTT ATTGCACTTG CGGGTATATG GGTATTTCTC TGTGTATCTG CAGATGCAGT TGGAGGACTG TCACTGAACT TCTATGAGAA AACCTGTCCC  GTAGTTAATA ATGCAGTAAA AAATGTTGTT GGACAGTACA TATCCAAAAA CCCAACTCTG GCCGCCCCTC TACTCAGATT ACATTTTCAT GACTGCTTTG TCAGAGGTTG CGATGGATCG  GTGCTCTTGA ATTCAACAAA TTCAACTAAA GCAGAAAAGG ATGCGCTTCC GAATCAGAGT CTGAGAGGAT TCCAAATAAT TGACACAGTC AAAGCTGCAG TGGAGAAAGT GTGCCCAGGT  GTGGTGTCAT GCGCCGATAT TCTTGCACTC GTCGCACGAG ATGCTGTCCA TATGTTGGGT GGACCATTCT GGAATGTTCC AACAGGACGC AGAGATGGAG TGGTGTCTAT CAAGAAAGAA  GCTCTCACTA AACTTCCTCC CCCCACTGGG AATTTCTCCC AACTCACATC AATATTTGCC AGCAATGGTC TTGATGTTAA AGACCTTGTT GTCTTATCAG GTGCCCACAC TATAGGGATA  TCCCACTGCA GCTCCTTTAG CAACCGGCTT TACAATTTTA CAGGAAAGGG AGATATGGAT CCGTCCTTGA ACAAGCATTA TGCAGCTAAA CTGAAGTTAC AATGCAAGCC AGGGTACAAA  AATACAACGG TAGAGATGGA TCCCGGCAGC TTTCGAACAT TTGATACGCA TTACTACACC AATCTAATGA AGCACAAAGG CCTCTTTCAA TCCGATGCCG CACTTCTGAC CAACAGCGAG  GTACAAGCGT TTGTCAATAT AGAATCGGAG GGCTCGTCGT TCTTCTCAGA TTTTACAGTG TCTATGGAGA AGATGGGCAG AATCGGTGCG CTCACAGGCA CTGCAGGACA AATACGACGA 
CACTGTGCAC TTACAAATTA A 

Retrieve as FASTA