Entry information : PtaPrx13
Entry ID 2049
Creation 2007-02-14 (Christophe Dunand)
Last sequence changes 2007-02-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2021-01-03 (Christophe Dunand)
Peroxidase information: PtaPrx13
Name PtaPrx13
Class Class III peroxidase    [Orthogroup: Prx032]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type Roots
Inducer Drought
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx13
start..stop
S start..stop
PtaPrx71 625 0 1..332 1..332
PabPrx75 567 0 1..332 1..332
PabPrx59 545 0 1..327 1..327
PsiPrx04 520 0 1..332 7..338
Literature and cross-references PtaPrx13
Literature Pratt,L. et al., An EST database from loblolly pine (Pinus taeda) roots recovering from drought stress, unpublished
EST ref. GenBank:   CF391763   CF663619.1 [3' end]
Cluster/Prediction ref. UniGene:   Pta.3109
Protein sequence: PtaPrx13
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   332 (310)
PWM (Da):   %s   35785.98 (33385.7)  
PI (pH):   %s   6.13 (5.39) Peptide Signal:   %s   cut: 23 range:23-332
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MATALRFCFV LALMTVWVST SANPQGALQP DYYQWTCPQA AAIISAGVQR AAAQEARMAA SLLRLHFHDC FVNGCDGSVL LDDTPTFEGE KTAAPNNNSI RGFEVIDAIK KELESACPGK  VSCADILAVV ARDSVVLTGG PSWEVLLGSR DSLTASKAAA NNSIPSPTSD ISALVESFKG VGLTQKDLVA LSGAHTIGNA RCQTFSSRLM GVQPDGSIQT EYLISLQQLC TQGFVINNNT 
LASLDLETPV TFDHQYYVNL RSGEGLLKTD QLLFSNGTEY TRDLVQLYIK GQKEFFEQFK KSMVKMGNIK PLTGTNGEIR SNCRSINSRS SA* 

Retrieve as FASTA  
Remarks Complete sequence from 5 ESTs. No genomic found. PtaPrx71 is a paralog confirmed with EST
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGACTG CTCTCAGATT TTGCTTTGTT CTAGCGTTGA TGACTGTATG GGTAAGCACG AGTGCGAACC CTCAGGGAGC ATTACAGCCT GATTACTATC AGTGGACATG TCCACAGGCG  GCAGCCATTA TTTCCGCTGG AGTTCAGAGA GCCGCAGCTC AGGAGGCTCG CATGGCTGCC TCTCTTCTTC GTCTGCATTT TCATGACTGC TTTGTCAATG GATGTGATGG TTCAGTGCTC  CTGGATGACA CACCGACTTT TGAGGGAGAG AAGACAGCAG CTCCCAACAA CAATTCGATC CGTGGTTTCG AAGTCATAGA TGCCATCAAA AAAGAACTTG AATCTGCATG CCCTGGAAAG  GTTTCCTGTG CTGATATACT TGCAGTGGTA GCCCGGGATT CTGTGGTGTT GACAGGAGGG CCATCATGGG AGGTGCTGCT GGGGAGCAGG GATAGCCTAA CAGCAAGCAA AGCAGCCGCA  AATAACAGCA TTCCGTCCCC CACATCGGAT ATTTCAGCAC TCGTTGAAAG TTTTAAGGGT GTAGGCCTCA CACAAAAAGA TTTGGTCGCG CTCTCAGGTG CCCATACAAT AGGAAATGCA  CGCTGCCAAA CATTCAGCTC TAGGCTCATG GGAGTCCAAC CAGATGGAAG TATTCAAACA GAGTACCTAA TATCTCTCCA ACAACTTTGC ACTCAGGGTT TTGTTATTAA TAACAACACT  CTAGCTTCAT TAGATTTGGA GACCCCGGTA ACTTTTGACC ACCAGTATTA TGTGAATCTA CGTTCTGGTG AAGGTTTACT GAAAACGGAC CAGCTGCTCT TTTCCAATGG AACAGAATAC  ACGAGGGATT TGGTGCAACT TTACATCAAA GGCCAGAAGG AATTTTTTGA ACAATTCAAA AAGTCCATGG TCAAGATGGG AAATATTAAA CCCCTGACTG GGACAAATGG TGAGATTCGT 
AGCAATTGCA GGTCCATTAA TTCACGTTCA TCGGCATGA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATCCATTGCC GGATTTTACT CTGTTTTCTA CACACAGTGG GGCTTTACCA TGGCGACTGC TCTCAGATTT TGCTTTGTTC TAGCGTTGAT GACTGTATGG GTAAGCACGA GTGCGAACCC  TCAGGGAGCA TTACAGCCTG ATTACTATCA GTGGACATGT CCACAGGCGG CAGCCATTAT TTCCGCTGGA GTTCAGAGAG CCGCAGCTCA GGAGGCTCGC ATGGCTGCCT CTCTTCTTCG  TCTGCATTTT CATGACTGCT TTGTCAATGG ATGTGATGGT TCAGTGCTCC TGGATGACAC ACCGACTTTT GAGGGAGAGA AGACAGCAGC TCCCAACAAC AATTCGATCC GTGGTTTCGA  AGTCATAGAT GCCATCAAAA AAGAACTTGA ATCTGCATGC CCTGGAAAGG TTTCCTGTGC TGATATACTT GCAGTGGTAG CCCGGGATTC TGTGGTGTTG ACAGGAGGGC CATCATGGGA  GGTGCTGCTG GGGAGCAGGG ATAGCCTAAC AGCAAGCAAA GCAGCCGCAA ATAACAGCAT TCCGTCCCCC ACATCGGATA TTTCAGCACT CGTTGAAAGT TTTAAGGGTG TAGGCCTCAC  ACAAAAAGAT TTGGTCGCGC TCTCAGGTGC CCATACAATA GGAAATGCAC GCTGCCAAAC ATTCAGCTCT AGGCTCATGG GAGTCCAACC AGATGGAAGT ATTCAAACAG AGTACCTAAT  ATCTCTCCAA CAACTTTGCA CTCAGGGTTT TGTTATTAAT AACAACACTC TAGCTTCATT AGATTTGGAG ACCCCGGTAA CTTTTGACCA CCAGTATTAT GTGAATCTAC GTTCTGGTGA  AGGTTTACTG AAAACGGACC AGCTGCTCTT TTCCAATGGA ACAGAATACA CGAGGGATTT GGTGCAACTT TACATCAAAG GCCAGAAGGA ATTTTTTGAA CAATTCAAAA AGTCCATGGT  CAAGATGGGA AATATTAAAC CCCTGACTGG GACAAATGGT GAGATTCGTA GCAATTGCAG GTCCATTAAT TCACGTTCAT CGGCATGAGC TATACCCATA ACAAGTTTTA TATACACCGT 
ATACAATATA TCTGTATACG CAATATATAA TGTGACAGAA ATGTATGGAA GTATTGTAAT ATTCTTTGAA GCACATTATT AAGCAGGTCA TAGAGGAATT GTGGCAGACC GTA 

Retrieve as FASTA