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Entry information : PtaPrx14(PTA00007333)
Entry ID 2050
Creation 2007-02-14 (Christophe Dunand)
Last sequence changes 2007-02-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-30 (Christophe Dunand)
Peroxidase information: PtaPrx14(PTA00007333)
Name PtaPrx14(PTA00007333)
Class Class III peroxidase    [Orthogroup: Prx004]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue types Roots
Xylem
Inducer Drought
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx14
start..stop		 S start..stop
PtaPrx62 643 0 1..329 1..329
PtaPrx63 638 0 1..329 1..329
PabPrx235 612 0 1..328 1..328
PabPrx40 594 0 1..328 1..328
Literature and cross-references PtaPrx14(PTA00007333)
Literature Sederoff,R., Molecular Basis of Wood Formation in the Pine Megagenome, unpublished
EST ref. GenBank:   AW783999  CF391928.1 [3' end]
Cluster/Prediction ref. UniGene:   Pta.11701
Protein sequence: PtaPrx14(PTA00007333)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329 (304)
PWM (Da):   %s   35009.17 (32229.7) Transmb domain:   %s   i5-27o
PI (pH):   %s   4.64 (4.52) Peptide Signal:   %s   cut: 26 range:26-329
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAFRYVSLNV IFLAFAFAFI QGTTAQLSPT FYQNTCPNVT NIVGQVIQQA LQNDSRIAAS LLRMHFHDCF VNGCDGSVLL DDTANFTGEK TAGPNNNSLR GFDVVDNIKA AVESACNATV  SCADILAIAA ERSVVLSSGP SWTIQLGRRD STTANATLPN TAIPAPTDNV STIIAKFQNV GLSVTDVVAL SGGHTIGRAR CTVFVNRLYN FSGTGNPDPT LNSSYLSTLQ STCPQNGNGS 
TLTSLDPVTP NTFDNNYYIN LQNEMGLLQS DQELLNTTGA ATISIVNDYT SSQADFFSNF SNSMINMGNI NPLTGTSGEI RLNCRKVNG 

Retrieve as FASTA  
Remarks Complete sequence from genomic (incorrect prediction, PTA00007333 contains 3 ORFs) and 7 ESTs.
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCCTTTC GATATGTTTC ACTGAATGTT ATATTCCTTG CATTTGCATT TGCATTCATT CAGGGCACCA CTGCTCAGCT CAGCCCTACC TTTTACCAGA ATACATGTCC GAATGTCACC  AATATAGTGG GGCAGGTCAT CCAGCAGGCT CTGCAAAATG ATTCAAGGAT TGCGGCCTCT CTCCTTCGTA TGCATTTTCA CGATTGCTTC GTTAATGTAA GTAGAAATAT GTCTCTTTGT  TCACTAGATT TGTCCTTAAT ACATCATATG TCTGTTTATT CAATAGATTT GTATTCAGTA CAGAGATTTG TAATACTGAT ACTTATCACT CTTTGATTTG AAGGGCTGTG ATGGATCCGT  TCTCTTAGAT GACACAGCAA ATTTTACTGG AGAGAAGACA GCAGGTCCGA ACAACAATTC CCTCAGGGGC TTCGATGTTG TGGACAACAT CAAGGCAGCA GTAGAGAGTG CATGCAACGC  AACAGTTTCT TGTGCTGACA TTCTTGCCAT TGCTGCAGAG CGATCAGTCG TACTGGTCTG TAAATCTATC GTAATTAATG ACTTATAAGC TTTTGATACT GTGTTACTAT AATCATTAAT  CCAACATGAT GAATATCCTC TATACCATTC CGCTTCAATA GCTCTAAGTT ATAACTGATC TATGAAGCCT GCTAACATGA TAACCATCTG CAACATGCTG CAGTCCAGTG GTCCATCGTG  GACTATACAG TTGGGAAGAC GAGATAGCAC CACTGCAAAC GCAACTCTTC CCAACACAGC CATTCCCGCA CCAACAGACA ATGTTTCCAC GATTATAGCA AAGTTCCAAA ATGTGGGACT  TTCTGTCACC GATGTAGTTG CTTTGTCAGG TATAGTAACA CTCTTATCTG CAGATGCAAC CTCACATTTC TTTCCATGGC AGAATTTGTT AGTGTTGTTA TTTGTCACAT GCATTGATAA  AGGGTATTTT CCAATCCAGC TAACTAGTTT GGGTTGTAAT TTCACAATGA AATTTTTTAT AAATGTGTGA ATATCCATGC AGGGAAATCA TGAATATAAA TTTAGAGTTG AATTTAATTA  GATTGCAAAT TTTTAGAATA TTTCAAGATT AGATTAACAG AATAAGTAAG TTCTTTGCCG TCGACCCTAT CTAAAATATT CCCAAATTCT ACCATCTGAA TAAAAAGTAA GTGATCCAGG  TGGGCACACA ATCGGGCGAG CTCGCTGCAC AGTTTTTGTC AACAGACTTT ACAATTTCAG TGGAACAGGC AATCCAGATC CGACGCTGAA TTCATCTTAT CTATCCACCC TGCAAAGCAC  GTGCCCACAG AATGGTAACG GGAGCACCCT AACCTCACTT GATCCGGTCA CTCCAAATAC CTTTGACAAC AACTACTACA TAAATCTCCA AAACGAAATG GGGCTTCTGC AGTCAGATCA  AGAACTGCTT AACACAACGG GGGCAGCCAC CATTTCTATT GTGAATGATT ACACCAGTAG TCAGGCTGAC TTTTTTTCCA ACTTCTCCAA CTCGATGATT AACATGGGAA ACATAAATCC  TCTAACGGGA ACAAGCGGAG AAATCCGCCT GAACTGCAGG AAGGTCAATG GCTAGAAATC CCTGTATCGC TTTGTTTAGT CTGTTTCCAA TTTTCATTTT CTCAAAGTGA GAGCAGTACC 
ATTCCGTTTT AAAACATAAA A 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCCTTTC GATATGTTTC ACTGAATGTT ATATTCCTTG CATTTGCATT TGCATTCATT CAGGGCACCA CTGCTCAGCT CAGCCCTACC TTTTACCAGA ATACATGTCC GAATGTCACC  AATATAGTGG GGCAGGTCAT CCAGCAGGCT CTGCAAAATG ATTCAAGGAT TGCGGCCTCT CTCCTTCGTA TGCATTTTCA CGATTGCTTC GTTAATGGCT GTGATGGATC CGTTCTCTTA  GATGACACAG CAAATTTTAC TGGAGAGAAG ACAGCAGGTC CGAACAACAA TTCCCTCAGG GGCTTCGATG TTGTGGACAA CATCAAGGCA GCAGTAGAGA GTGCATGCAA CGCAACAGTT  TCTTGTGCTG ACATTCTTGC CATTGCTGCA GAGCGATCAG TCGTACTGTC CAGTGGTCCA TCGTGGACTA TACAGTTGGG AAGACGAGAT AGCACCACTG CAAACGCAAC TCTTCCCAAC  ACAGCCATTC CCGCACCAAC AGACAATGTT TCCACGATTA TAGCAAAGTT CCAAAATGTG GGACTTTCTG TCACCGATGT AGTTGCTTTG TCAGGTGGGC ACACAATCGG GCGAGCTCGC  TGCACAGTTT TTGTCAACAG ACTTTACAAT TTCAGTGGAA CAGGCAATCC AGATCCGACG CTGAATTCAT CTTATCTATC CACCCTGCAA AGCACGTGCC CACAGAATGG TAACGGGAGC  ACCCTAACCT CACTTGATCC GGTCACTCCA AATACCTTTG ACAACAACTA CTACATAAAT CTCCAAAACG AAATGGGGCT TCTGCAGTCA GATCAAGAAC TGCTTAACAC AACGGGGGCA  GCCACCATTT CTATTGTGAA TGATTACACC AGTAGTCAGG CTGACTTTTT TTCCAACTTC TCCAACTCGA TGATTAACAT GGGAAACATA AATCCTCTAA CGGGAACAAG CGGAGAAATC 
CGCCTGAACT GCAGGAAGGT CAATGGCTAG 

Retrieve as FASTA