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Entry information : PtaPrx15(PTA00015026)
Entry ID 2051
Creation 2007-02-14 (Christophe Dunand)
Last sequence changes 2007-02-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-25 (Christophe Dunand)
Peroxidase information: PtaPrx15(PTA00015026)
Name PtaPrx15(PTA00015026)
Class Class III peroxidase     [Orthogroup: Prx021]*
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx15
start..stop		 S start..stop
PabPrx231 649 0 1..360 1..360
PabPrx183 508 0 8..360 13..367
PtaPrx32 479 9.9e-171 8..359 10..364
PpPrx06 460 9.79e-164 48..359 22..333
Literature and cross-references PtaPrx15(PTA00015026)
Literature Pratt,L. et al., An EST database from well-watered loblolly pine (Pinus taeda) roots, unpublished
EST ref. GenBank:   CF477630.1 [3' end]  CF477732 [Fragment]
Cluster/Prediction ref. UniGene:   Pta.13105
Protein sequence: PtaPrx15(PTA00015026)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   360 (299)
PWM (Da):   %s   38512.12 (31882.6) Transmb domain:   %s   i9-31o
PI (pH):   %s   6.24 (4.82) Peptide Signal:   %s   cut: 29 range:29-327
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEKNGGSRSV LFGALFYALA GYAVSVNVGV SLETPGVDFG IGTSQVPGVP QGLTEGFYSL SCPDAEFAVF EVVKNAFINN PAVAPGLIRM HFHDCFVRGC DGSVLIDSIG KNVAEKDSPA  NNPSLHGFEV IDMAKAKLEA MCPQTVSCAD ILAFAARDSA KLASPPQYPL SWDVAAGRRD GNISLASDIP ANLPPPTFNV TQLTQRFAAK GLSQDEMVIL SGAHTIGVSH CSSFVSRLYN  FNSTHPTDPS LDPVYAMQLK ARCPNGNPNN KTTVPMEVNT PNILDNLYYD GVIKNRGLFT SDATLLTNAN TRNLVFANSG TFSMCTWQQN FAAAMVKMGK IEVLTGNQGE IRVNCRVVNK 
* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (PTA00015026) and 2 ESTs (mismatches and Ps is missing.).
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAGAAGA ATGGCGGCAG CAGATCGGTA CTCTTTGGCG CATTATTCTA TGCCTTGGCT GGTTATGCAG TCAGCGTCAA CGTTGGCGTT AGTCTTGAAA CACCGGGTGT TGATTTTGGA  ATTGGTACGT CTCAAGTACC GGGCGTTCCT CAGGGACTTA CAGAGGGTTT CTACAGTTTG AGTTGTCCGG ATGCAGAATT CGCTGTGTTT GAGGTGGTGA AAAATGCATT CATAAACAAT  CCAGCAGTAG CTCCTGGACT CATAAGGATG CATTTCCACG ATTGTTTCGT GAGGGTAACG ATTTTCTTAT ATTCATACAA TAAACATAAT TATTTACTCC CATACAATTG TATTAGGTTT  TTGAGATCTA AAATTCGGTT GACGTGGACT TACAGGGATG TGACGGGTCA GTTCTCATTG ATTCCATTGG GAAAAACGTG GCAGAGAAAG ATTCACCTGC TAACAATCCA AGTCTTCATG  GATTCGAGGT GATTGACATG GCGAAAGCCA AGCTAGAGGC TATGTGTCCC CAAACAGTTT CATGCGCAGA TATCCTCGCA TTTGCTGCAA GAGATAGTGC AAAACTGGTA ATCTTCGGGT  TTATTGTCCT TCAAACTGGT TATAGCTTAG GAGAAAAAGT GTTCAATTCA TTCTAATTAT AATGGGCAAA ACAATGGCAG GCATCTCCAC CTCAATATCC CCTAAGTTGG GATGTCGCAG  CTGGAAGAAG GGATGGAAAT ATTTCACTAG CTTCAGATAT CCCGGCAAAT CTACCACCCC CCACCTTCAA TGTAACTCAG CTAACTCAGA GATTTGCAGC CAAAGGACTA TCCCAGGACG  AGATGGTTAT ATTGTCTGGT ATATTCAGAG ACCTGTATAA TTTAATAGTG TTTTCATTAT CTTAATATTA GAGCGAGTAT AATGGCCATC TTGTTCTTTG AACGTTGATA CAGGAGCCCA  CACAATTGGT GTGTCGCATT GCTCTTCATT TGTGAGCAGG CTCTACAACT TCAACAGCAC GCATCCCACT GACCCGTCGC TTGATCCTGT GTACGCTATG CAGCTGAAGG CAAGGTGTCC  CAATGGAAAC CCTAACAACA AAACGACGGT GCCCATGGAA GTTAATACCC CCAACATTCT CGACAATCTC TACTACGACG GCGTTATAAA GAATCGCGGT TTGTTTACCT CTGACGCAAC  GCTCTTGACA AATGCAAACA CCAGGAATTT GGTTTTTGCA AACTCCGGCA CATTTAGCAT GTGCACATGG CAGCAAAACT TTGCTGCTGC GATGGTCAAA ATGGGAAAGA TTGAGGTATT 
GACTGGCAAC CAGGGAGAAA TCCGCGTGAA CTGCAGGGTT GTCAACAAGT AA 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAGAAGA ATGGCGGCAG CAGATCGGTA CTCTTTGGCG CATTATTCTA TGCCTTGGCT GGTTATGCAG TCAGCGTCAA CGTTGGCGTT AGTCTTGAAA CACCGGGTGT TGATTTTGGA  ATTGGTACGT CTCAAGTACC GGGCGTTCCT CAGGGACTTA CAGAGGGTTT CTACAGTTTG AGTTGTCCGG ATGCAGAATT CGCTGTGTTT GAGGTGGTGA AAAATGCATT CATAAACAAT  CCAGCAGTAG CTCCTGGACT CATAAGGATG CATTTCCACG ATTGTTTCGT GAGGGGATGT GACGGGTCAG TTCTCATTGA TTCCATTGGG AAAAACGTGG CAGAGAAAGA TTCACCTGCT  AACAATCCAA GTCTTCATGG ATTCGAGGTG ATTGACATGG CGAAAGCCAA GCTAGAGGCT ATGTGTCCCC AAACAGTTTC ATGCGCAGAT ATCCTCGCAT TTGCTGCAAG AGATAGTGCA  AAACTGGCAT CTCCACCTCA ATATCCCCTA AGTTGGGATG TCGCAGCTGG AAGAAGGGAT GGAAATATTT CACTAGCTTC AGATATCCCG GCAAATCTAC CACCCCCCAC CTTCAATGTA  ACTCAGCTAA CTCAGAGATT TGCAGCCAAA GGACTATCCC AGGACGAGAT GGTTATATTG TCTGGAGCCC ACACAATTGG TGTGTCGCAT TGCTCTTCAT TTGTGAGCAG GCTCTACAAC  TTCAACAGCA CGCATCCCAC TGACCCGTCG CTTGATCCTG TGTACGCTAT GCAGCTGAAG GCAAGGTGTC CCAATGGAAA CCCTAACAAC AAAACGACGG TGCCCATGGA AGTTAATACC  CCCAACATTC TCGACAATCT CTACTACGAC GGCGTTATAA AGAATCGCGG TTTGTTTACC TCTGACGCAA CGCTCTTGAC AAATGCAAAC ACCAGGAATT TGGTTTTTGC AAACTCCGGC  ACATTTAGCA TGTGCACATG GCAGCAAAAC TTTGCTGCTG CGATGGTCAA AATGGGAAAG ATTGAGGTAT TGACTGGCAA CCAGGGAGAA ATCCGCGTGA ACTGCAGGGT TGTCAACAAG 
TAA 

Retrieve as FASTA