Entry information : PtaPrx22(PTA00070584)
Entry ID 2058
Creation 2007-09-04 (Christophe Dunand)
Last sequence changes 2007-09-04 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2021-02-09 (Christophe Dunand)
Peroxidase information: PtaPrx22(PTA00070584)
Name PtaPrx22(PTA00070584)
Class Class III peroxidase    [Orthogroup: Prx299]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type Roots
Inducer Drought
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx22
start..stop
S start..stop
PabPrx238 530 0 1..324 10..333
GbPrx40 431 2e-153 12..324 1..313
PtaPrx93 423 5e-150 4..323 14..333
PabPrx228 415 7e-147 1..323 11..333
Literature and cross-references PtaPrx22(PTA00070584)
Literature Pratt,L. et al., An EST database from untreated loblolly pine (Pinus taeda) roots, unpublished.
EST ref. GenBank:   CF671723 [5' end]   DR164350.1 [3' end]
Cluster/Prediction ref. UniGene:   Pta.12494
Protein sequence: PtaPrx22(PTA00070584)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   324 (303)
PWM (Da):   %s   34330.65 (31999.5)  
PI (pH):   %s   4.12 (3.96) Peptide Signal:   %s   cut: 22 range:22-324
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MHCAFIVISL LMGLYFGHAR AQLSETFYEQ TCPNLETIVT QTVTAQFQSN FATGPATLRL LFHDCFVRGC DASVLIDSTS TNTAEKDATE NLTLNPAGTN TVVAAKAAVE AVCPNLVSCA  DILALATRDV VGLTGGPSYS VELGRRDGLV SLASEVAANI PAPTLDLDQL NDFFSVKGLS QIDMIALSGA HTIGVSHCSG FSNRLYNFSS SNQVDPTLDS SYAAQLQQEC PVNADSSIFV 
SMDPQTPTQF DNVYYQLLQS SEGLFSSDEI LFTDSRSSST VNSFAASADS FQTAFVTAIT NMGRVGVKTG SDGEIRVDCT AFNS 

Retrieve as FASTA  
Remarks Complete sequence from genomic (incorrect prediction, PTA00070584 only exons 1 and 2 due to NN, PTA00074268 last exons) and 28 ESTs.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCCTCAC GAAATATGAG GGCAGAGATG CATTGTGCTT TCAGTGTTAT ATCGCTCCTG ATGGGTCTTT ATTTTGGCCA TGCGAGAGCT CAACTGAGCG AGACTTTCTA CGAGCAGACG  TGCCCAAATC TGGAAACCAT AGTTACGCAA ACAGTCACAG CTCAATTTCA GTCGAATTTT GCTACAGGCC CCGCAACTCT GAGGCTCCTC TTTCATGATT GCTTTGTTCG GGTAAACAAA  AATGGAGTTC ATATAAATAA TATACGTGAA ATGCTTCCTG GGAATTATTT ATTTTTATGG TTTTGTTGTC ATCTTTGCAG GGATGTGATG CATCGGTCCT TATTGACAGT ACTTCCACCA  ACACAGCTGA GAAAGATGCC ACGGAGAACT TGACGCTCAA CCCGGCTGGA ACTAACACTG TTGTCGCCGC AAAGGCCGCT GTGGAGGCAG TCTGTCCCAA CCTGGTCTCT TGTGCAGATA 
TTTTAGCATT GGCTACCAGA GATGTTGTTG GGTTGGTAAG TTTAATGTCA GCCATTTTTA TAGGCATATA TTTTAGCTTT GGGTACTAG 

Retrieve as FASTA