Entry information : PtaPrx25(PTA00009051)
Entry ID 2064
Creation 2007-09-05 (Christophe Dunand)
Last sequence changes 2007-09-05 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-25 (Christophe Dunand)
Peroxidase information: PtaPrx25(PTA00009051)
Name PtaPrx25(PTA00009051)
Class Class III peroxidase     [Orthogroup: Prx025]*
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx25
start..stop
S start..stop
PtaPrx25-3 637 0 1..329 1..329
PabPrx65 545 0 1..329 1..328
PtaPrx05 512 0 1..329 1..328
PabPrx211 483 1e-174 56..329 2..274
Literature and cross-references PtaPrx25(PTA00009051)
Literature Pratt,L. et al., EST database from well-watered loblolly pine (Pinus taeda) roots, unpublished.
EST ref. GenBank:   CV035963.1 [5' end]   CX713676.1 [5' end]
Cluster/Prediction ref. UniGene:   Pta.19409
Protein sequence: PtaPrx25(PTA00009051)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329 (306)
PWM (Da):   %s   35196.79 (32656.3)  
PI (pH):   %s   5.01 (4.77) Peptide Signal:   %s   cut: 23 range:23-328
Sequence
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Send to Peroxiscan
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MDKHQIFLTI LLVVLSSIPA LHAELAAALL SEDYYEKSCP FVVPIVSSEM HLAISKEARV AAFILRLHFH DCFVQGCDAS VLLDDTPTFT GEKTANPNVN SLRGYEVIDA IKERLEAVCP  GIVSCADILT LAARDAVVLA GGPDWGVPLG RKDSRSASLS EANNNIPTPN SNIQTLIEKF LLQGLTATDM VALVGGHTIG QARCTNFRQR IYSGGNGGNE LYASGLRATC PPSGGDDNIS 
PLDHASPTLF DNSYYVNLVN GEGLLNSDQV MYSGGLGSVL TAHIVKDYAT DALEFAKQFA DSMVKMGNIV KPETFLTGEV RKNCRVINE 

Retrieve as FASTA  
Remarks Complete sequence from genomic (( incorrect prediction, PTA00009051 contains two ORFs) and 4 ESTs (1 unigenes).
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGACAAAC ATCAGATATT CTTAACTATT TTGCTTGTGG TTTTGTCATC CATTCCGGCG CTTCATGCAG AGCTTGCAGC TGCGTTGTTG TCTGAAGATT ATTACGAGAA GTCATGCCCC  TTTGTAGTTC CCATTGTAAG TTCAGAAATG CATTTAGCAA TTTCGAAAGA AGCTCGTGTG GCAGCTTTCA TACTTCGCCT CCATTTTCAC GATTGCTTTG TGCAGGTACT TCATTTTAAT  ATATCTCACT CTTGGTATCT AAATCATATT TTTTATTGCT TTCCTATTAA AATTGTTTCA CCAGAATTTT CAATCCCAAT GGTCTATTAT TTTGGATGTA CACTTCCCAT CTTATGTGTG  GGGTGTAGAT TTTGGAAATA TGTTGAAATG TGAGAGCTAA GAGAGAGGTT AAATAATTAA TTTTATTAAC TTTTTGCAGC CCAATGGTCT ATTATTTTGG ATGTCGACTT CCCATCTTAT  GTGTGGGGTG TAGATTTTGG AAATATGTTG AAATGTGAGA GCTAAGGGAG AGGTTAAATA ATTAATTTAA TTTTTTTTTT TGTTGAATGT TAAATTTCAA AACAGCAATC AACGTAAAGA  TGTCTCACTC CACTTATTGT GACATTTTAT CCAAAATTTT GGATGTACGC TCTACCCATC TGATTCCCGA ATGTGATGGT CGAGAGGGTT CAATTCTTTG ACCTTTTCAT GACAATCGAT  ATTTCTAAAA TCTGCAATCA ACCTAAGTTC AAGTTCCTCA AAATCCTGAG AATGAGTGGA GTCCCAGAAA AGCCTCCTAA TTGTTAGATT CAAAATATTT CCCATCTAAA GTTTCGGATG  TATGCTCTAC CCATCTGATC CCCGAACGTG ATGGTCTAGG ACGGTCAATT CTTTGACCTC TTTCATGGCA ATTAAAAATA CTTTTAAAAT CCTGAAATTT GATGGACTGT CAAATTGACA  GGGACAACAT TTTGATTACA CAGTTTTTAC CGGATTACTT ATGCTCTAAA ATTTAACCAT TGCGATAATA TTTGGAATTA ATGCAGGGAT GCGATGCGTC TGTGTTGCTC GATGACACGC  CCACCTTTAC AGGGGAGAAA ACAGCGAACC CAAATGTAAA TTCACTTAGA GGATATGAAG TTATAGATGC CATTAAGGAA AGACTAGAGG CTGTGTGCCC CGGTATTGTG TCTTGCGCCG  ATATACTTAC CCTGGCTGCT AGAGATGCAG TAGTGCTGGT ATGTTATACA TTTGTTTCTT AGCAGATTGT ATATTTTGAA AGGGGTATAT GTCAATTATT TAATTTTACT TTTACGATTC  AATTATATAT TTTGAAAATA TTGTGACTAA TAGATTATTT AAGTCAATTT TTTAATCTGG TTTTTAATTT AATTGTATAT TTTGAAAATA GTGATGAGAT TTGATTATTA TTATTTAAAT  CAATTATGTA ACTAGTAGCT ATCAACATGT AAGAAATCAA AGAGTGAAGA TTTCCTCAGT TGTTTAATTT TATCTGACTT TTGTAACGGA CACTCTCCAC CATCATCGAC GACCAAAAAA  CAAATAATGA AGATGAGCGA AATGTTCACT AAAAACAACA AACAAAATTA AAAATTTTAT CCACAATTTC ATCTAAAAAA TCCTCTGCAA AATGTTAAAA TAATCTTAAT CCAATTTTAT  TTACAAATGT TAAAAAAATC TTAATCAAAT TTTATTGATA TAAAATTCGT AAAACCCTCT TTTATGCTAC TTGTCAGGCC GGAGGCCCAG ACTGGGGCGT CCCATTGGGA AGAAAGGACT  CAAGAAGCGC TAGTTTGAGC GAGGCAAACA ACAACATCCC CACGCCCAAT TCAAACATCC AGACGCTCAT TGAAAAGTTT TTATTACAAG GCCTCACAGC CACAGATATG GTGGCACTCG  TTGGTCAGTG AATACCAACT CTGGAGCATG TTTGGATATT GATTTTCGTG GGCATTTATT TTTATGTCTA TTTTAGATTC TCAGAATATT TCTTGCAGTT AAAAGAGGGT CTAATTGTTT  GCCTTCTTTA TCGATGGTCA TAATCTCCGA GATATTTTCG GAATCTGCAA TCTACATATT TTTAACAGAT TTTTGTGAAG ATAAACTTTT GTTATAATCT TTTAGAGTTT CCCCTTGCGC  AGGTGGGCAC ACAATTGGAC AAGCTCGATG CACAAATTTT AGGCAAAGGA TTTATAGTGG CGGGAATGGA GGCAATGAAC TTTATGCATC TGGACTGAGA GCAACTTGCC CTCCATCTGG  TGGCGATGAC AACATATCCC CCTTGGATCA TGCAAGTCCA ACGTTGTTCG ACAATTCATA TTACGTCAAC TTAGTGAATG GGGAAGGGCT CCTCAACTCT GACCAGGTTA TGTATTCAGG  TGGCCTGGGG AGCGTACTAA CGGCGCATAT TGTCAAAGAT TACGCTACTG ACGCTCTCGA ATTTGCCAAG CAGTTCGCGG ACTCAATGGT GAAGATGGGA AATATAGTGA AGCCTGAAAC 
TTTTCTGACT GGCGAAGTAA GGAAGAACTG CCGCGTAATC AATGAATGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGACAAAC ATCAGATATT CTTAACTATT TTGCTTGTGG TTTTGTCATC CATTCCGGCG CTTCATGCAG AGCTTGCAGC TGCGTTGTTG TCTGAAGATT ATTACGAGAA GTCATGCCCC  TTTGTAGTTC CCATTGTAAG TTCAGAAATG CATTTAGCAA TTTCGAAAGA AGCTCGTGTG GCAGCTTTCA TACTTCGCCT CCATTTTCAC GATTGCTTTG TGCAGGGATG CGATGCGTCT  GTGTTGCTCG ATGACACGCC CACCTTTACA GGGGAGAAAA CAGCGAACCC AAATGTAAAT TCACTTAGAG GATATGAAGT TATAGATGCC ATTAAGGAAA GACTAGAGGC TGTGTGCCCC  GGTATTGTGT CTTGCGCCGA TATACTTACC CTGGCTGCTA GAGATGCAGT AGTGCTGGCC GGAGGCCCAG ACTGGGGCGT CCCATTGGGA AGAAAGGACT CAAGAAGCGC TAGTTTGAGC  GAGGCAAACA ACAACATCCC CACGCCCAAT TCAAACATCC AGACGCTCAT TGAAAAGTTT TTATTACAAG GCCTCACAGC CACAGATATG GTGGCACTCG TTGGTGGGCA CACAATTGGA  CAAGCTCGAT GCACAAATTT TAGGCAAAGG ATTTATAGTG GCGGGAATGG AGGCAATGAA CTTTATGCAT CTGGACTGAG AGCAACTTGC CCTCCATCTG GTGGCGATGA CAACATATCC  CCCTTGGATC ATGCAAGTCC AACGTTGTTC GACAATTCAT ATTACGTCAA CTTAGTGAAT GGGGAAGGGC TCCTCAACTC TGACCAGGTT ATGTATTCAG GTGGCCTGGG GAGCGTACTA  ACGGCGCATA TTGTCAAAGA TTACGCTACT GACGCTCTCG AATTTGCCAA GCAGTTCGCG GACTCAATGG TGAAGATGGG AAATATAGTG AAGCCTGAAA CTTTTCTGAC TGGCGAAGTA 
AGGAAGAACT GCCGCGTAAT CAATGAATGA 

Retrieve as FASTA