Entry information : ShyPrx04
Entry ID 2068
Creation 2007-09-19 (Christophe Dunand)
Last sequence changes 2007-09-19 (Christophe Dunand)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2012-05-11 (Christophe Dunand)
Peroxidase information: ShyPrx04
Name ShyPrx04
Class Class III peroxidase     [Orthogroup: Prx078]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Saccharum
Organism Saccharum hybrid    [TaxId: 128810 ]
Cellular localisation N/D
Tissue type Stems
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ShyPrx04
start..stop
S start..stop
SbPrx47 252 6e-85 1..159 1..158
ZmPrx42 221 2e-72 25..158 30..165
SiPrx131 219 4e-72 20..161 17..160
PviPrx09 218 5e-71 1..161 17..184
Literature and cross-references ShyPrx04
Literature Casu,R.E., Dimmock,C.M., Chapman,S.C., Grof,C.P.L, McIntyre,C.L., Bonnett,G.D. and Manners,J.M. Identification of differentially expressed transcripts from maturing stem of sugarcane by in silico analysis of stem expressed sequence tags and gene expression profiling. Plant Mol. Biol. 54 (4), 503-517 (2004).
EST ref. GenBank:   CF576401 [5' end]
Protein sequence: ShyPrx04
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   201 (177)
PWM (Da):   %s   21389.76 (19190.6) Transmb domain:   %s   i2-24o
PI (pH):   %s   7.27 (7.30) Peptide Signal:   %s   cut: 25 range:25-201
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAVSVSCLSL LAVVLAALAS AASAQLSSTF YDTSCPNALS TIKSAVDAAV MQEARTGASL LRMHFHDCFV HGCDGSVLLN DTSGEQTQRP NLTLRRFDVV DNIKAQVEAV CPGVVSCADI 
LAVAARNSVV ALGGPCWTVL LGRRDSTVYS RSEKTDLPSS QVLKIASTLV FGSTKNFTTE WFFLRLTYSA SAMLNFNTFY N 

Retrieve as FASTA  
Remarks Partial sequence from 1 singleton. 3' is missing and multiple frame shifts.