1. Browse the Database
  2. View Redoxidase
Entry information : PtaPrx02(PTA00039566)
Entry ID 2070
Creation 2007-08-31 (Christophe Dunand)
Last sequence changes 2007-08-31 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-28 (Christophe Dunand)
Peroxidase information: PtaPrx02(PTA00039566)
Name PtaPrx02(PTA00039566)
Class Class III peroxidase    [Orthogroup: Prx028]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue types Roots
Xylem
Inducer Drought
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx02
start..stop		 S start..stop
PabPrx221 608 0 1..324 1..324
GbPrx21 531 0 6..324 7..323
AtrPrx37 441 6.15e-157 6..324 10..320
NnPrx100 430 6.83e-153 11..322 15..320
Literature and cross-references PtaPrx02(PTA00039566)
Literature Sederoff,R., Molecular Basis of Wood Formation in the Pine Megagenome, unpublished
EST ref. GenBank:   DR110447.1 [5' end]  DR050470.1 [Fragment]
Cluster/Prediction ref. UniGene:   Pta.8110
Protein sequence: PtaPrx02(PTA00039566)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   323 (302)
PWM (Da):   %s   35336.42 (32987.2)  
PI (pH):   %s   4.93 (5.02) Peptide Signal:   %s   cut: 22 range:22-323
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEARDLLFTV LILIGAHVGE GLSLDYYAFT CPFAEAIIGD TVNRAVQRDI TISAALLRMH FHDCFVEGCD GSILIDSTSD NKAEKDSPAN LSLRGFEVID EAKARIEDSC PGVVSCADII  AIAARDAVVM SGGPMYAVPK GRKDGSRSRI EDTRNLPFAT FNVSQLIKTF AQHGLSSQEM VVLSGGHTLG VSRCSSFKNR LIHFDSTHDV DPSINPQFLA TLKRTCIKSS SSNDFDDNAN 
VAFDTTKSVF DNVYFSMLQS GAGLLTSDDT LMSSPRTRAL VNTYAMNQAT FFFDFSQAMV RMGLVEVKED DEGDIRLNCR RLN* 

Retrieve as FASTA  
Remarks Complete sequence from genomic and 10 ESTs.(3 mismatches)
DNA ►
Send to BLAST
CDS►
Send to BLAST