Entry information : PtaPrx30(PTA00059546/ PTA00073055)
Entry ID 2075
Creation 2007-02-14 (Christophe Dunand)
Last sequence changes 2007-02-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-30 (Christophe Dunand)
Peroxidase information: PtaPrx30(PTA00059546/ PTA00073055)
Name PtaPrx30(PTA00059546/ PTA00073055)
Class Class III peroxidase    [Orthogroup: Prx072]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type Roots
Inducer Drought
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx30
start..stop
S start..stop
PabPrx184 559 0 1..318 1..318
PabPrx154 544 0 1..318 1..318
PabPrx97 536 0 1..318 1..318
PtaPrx102 531 0 9..318 5..314
Literature and cross-references PtaPrx30(PTA00059546/ PTA00073055)
Literature Pratt,L. et al., An EST database from loblolly pine (Pinus taeda) roots recovering from drought stress, unpublished
EST ref. GenBank:   CF388499   CF386681 [5' end]   CF386788.1 [3' end]
Protein sequence: PtaPrx30(PTA00059546/ PTA00073055)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   318 (294)
PWM (Da):   %s   33642.38 (31053.1)  
PI (pH):   %s   5.93 (5.62) Peptide Signal:   %s   cut: 25 range:25-318
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MNTFACNALL VLFIICSINN TVHGQLSSTF YGKSCPMAFS IVEAGVKQAV AIEKRMGASL LRLHFHDCFV NGCDGSILLD DNSTFTGEKT AAPNNNSVRG FDVIDTIKSD LEAACCGVVS  CADILAIVAR DSVVELGGPT WTVLLGRRDS TTASFSAANN DIPPPTSNLS GLISSFQTHG LSTKDMVALS GSHTIGQARC TSFRARIYNE TNIDSSFATS LKASCPSVGG DNNLSPLDVA 
TPTIFDRDYS SNLRSQKGLL HSDQQLFNGG STDSQVTTYS TDQNTFFTDF AAAMVNMGNI SPLTGSSGEI RKNCRKSN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (incorrect prediction,:PTA00059546 (large part of exon 1 is missing due to NNN) and PTA00073055 (exon 1 is missing due to NNN) and 3 ESTs. Strain="CCLONES".
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GATGGCTCCA TACTATTGGA TGACAACTCC ACGTTTACCG GAGAAAAGAC TGCAGCCCCA AATAATAATT CCGTGAGAGG ATTCGAAGTA ATAGACACCA TCAAATCTGA CCTGGAGGCA  GCCTGCTGTG GTGTCGTGTC TTGTGCAGAC ATTCTCGCCA TTGTTGCCCG TGATTCAGTC GTTGAAGTAT TAATTTCTCC CTTCTCTTCT TCATTAGTTA ACTAAATACA ATATCTCACA  TCCCATGGAA TCAAATAATG TTGTGTGTGA TTGCAATTTG ATAGCTGGGA GGCCCAACAT GGACGGTATT GCTGGGAAGG CGTGACTCGA CCACTGCAAG TTTTAGTGCT GCAAACAATG  ACATTCCGCC TCCCACTTCA AATCTCAGCG GACTTATCTC ATCTTTTCAA ACACATGGAC TGTCTACCAA AGATATGGTT GCACTCTCAG GTATGTTATT ACTTATGTTA TTACTTATTC  TCCAAGTAAA CCATAACCTA ACCAATGCAT AATGTGTACA TATATTGATT GCCTTTGTTT AACACTTATC ATGTGGTTTT CATTTGTGTA GGTTCCCATA CTATTGGTCA AGCGCGGTGC  ACTTCTTTCA GAGCTCGCAT CTACAACGAA ACCAACATTG ACTCTTCGTT CGCCACTTCT CTGAAGGCAA GCTGTCCAAG CGTTGGTGGC GACAACAACC TCTCGCCCTT GGATGTGGCC  ACCCCTACCA TATTTGACAA CGATTATTAC AGTAATTTGA GAAGCCAAAA AGGGCTTCTC CACTCGGATC AGCAACTATT TAATGGAGGT TCCACAGATT CTCAGGTTAC TACCTACAGC 
ACCGATCAGA ACACCTTCTT TACAGACTTC GCAGCTGCAA TGGTGAATAT GGGCAATATC AGTCCTCTCA CTGGCACCAG TGGAGAAATC CGCAAAAATT GCAGGAAGTC CAATTAA 

Retrieve as FASTA