Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
326 |
PWM (Da): |
35228.04 |
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PI (pH): |
5.76 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MVWANAKMRLALSLVTVFFGISLANLEVGFYSNTCPQAESIVKRVVSGAALSDPNLPAILLRLHFHDCFVEGCDGSILVNNGAISEKNAFGHEGVRGFEIVEAVKAELEAACPGVVSCSD IVALAARDAISLANGPAYEVPTGRRDGRVSNMSLAKDMPEVSDSIEILKAKFMQKGLNAKDLVLLSAAHTIGTTACFFMSKRLYDFLPGGQPDPTINPTFLPELTTQCPQNGDINVRLPI DRFSERLFDKQILQNIKDGFAVLQTDAGLYEDVTTRQVVDSYLGMLNPFFGPTFESDFVKAIVKMGKIGVKTGFKGEIRRVCSAFN |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (chromo 4, 3 introns), no EST. Additionnal residus in N-term in Phytozome and TAIR |
Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GAGAGTATGT AATGAAATTG AAACTGTATA ATTTCTTTTG CTCAAACAAT GTTTTGACTC CATAATATGT GTAGGCAAAA AAGCCTCTCA AACTCTGAAT GAATACTAAA AAACAAAGAG
AGTATTAATG CATGGAATTG AAAAAGTACA AATTCTAGAG AGGATGCAAA ACAATTATAA AGAGAGTTGA ATGTACGATT TTCCACTACA TCCTTGGCGT TAATAGTGTA CATGTATGAA
TTCTGAAGTC TCAACATGTA GTTTTTACCA AAAGACAAAA TAAAGTTGTA TTCGTTATAA TTCTTAGCTG TCTCGAATCA ACTAATTTCT TCCCCCATTC CCTTATGACA AAAAAAAAAC
CTAGGCTATT AAAAGAACGA ACAAAACAAA AAGAGAATCA AAGAGCTTAA GTTCTTTCGG CTCTTATTCT TATAATCGTA GACCACTTAA ATTCCTTGCG TTGGGCCTTC TCACAAATCG
TCCCTGTTGA TGAGAGACAA CCACAATATT ACAATGCCAA TCTTTCACCT AAATCGTAGC TCAAATAAAA TGTATCAGCG TTACCTTCAT TCTACCCTTG TTGACAGTAT TATATATATA
AGTTTCAACT TTTACATTTT TCAAGACTAT GAGATTTATA CCTTCATACG CGGGCGTTGG TCGGCGTTGA GCTTGCGAAC TTGATATCGG ATTTTCTTGG AGAAGAGTCT ATTCCTCCGC
TTCTCTTTAT ACCTTAACAC ACTTGCTTCT CTCATACCAC TTTCTCCGAA CAAATCTATC TCACCCAACC TTACCTGTCC CCAAACATCA TTCATCTTAC GTCAAATTCA CTCACTAAAT
TGTCAACTAA ATTCACTTGA TAATCTACTT CTAACAAAAC ATTGTAAGTC AGAAATGACA AGAACTACAT AAGAACCATT TTCAATTCTT GTCAGGTTCA GAAATTCATA ATGAATTGTT
TGTTGCCAAC AATTGGTCAT CAAAACGTTT TTATTTCGAT
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Retrieve as FASTA
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DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGTTTGGGCAAATGCTAAGATGAGGCTAGCTTTGTCTCTTGTTACGGTTTTCTTCGGCATCTCTCTTGCTAATCTTGAAGTCGGATTTTACTCCAATACATGCCCTCAAGCCGAGTCA ATCGTTAAGAGGGTTGTCTCAGGGGCTGCTCTTTCCGACCCTAACCTCCCAGCCATACTTCTACGGCTCCATTTCCATGATTGCTTTGTTGAGAGGTACAATGCACTTTCCTCCCCTTCG TGCTTTCTACTATTGCTTGCTATTCTTAGAGATTTAACCACACGTTCAGGGATGTGATGGCTCGATCCTCGTGAACAACGGAGCAATCTCTGAAAAGAATGCATTTGGACATGAAGGCGT TAGAGGATTTGAGATAGTAGAAGCCGTCAAAGCCGAGCTTGAAGCTGCATGCCCCGGTGTTGTCTCCTGCTCAGACATTGTTGCCTTGGCTGCACGTGATGCCATATCTTTGTGGTAAAA AATAAAATAGAGAAAGAAAAAAACCTTTCCATCTTTATCTATCTTCTTCTCCGTTGTGAGCAATTCATGATACAGGCGAATGGACCGGCGTATGAGGTGCCAACTGGGCGGAGAGATGGT CGGGTTTCGAACATGTCATTGGCTAAGGACATGCCGGAGGTGAGTGACTCGATTGAGATACTAAAGGCTAAGTTCATGCAGAAAGGACTCAACGCCAAAGACCTCGTGCTTCTCAGTGTG GTATGTATCTCTTCTTCTTCTTCGTCTTCTCTCTCATTCATGTTTGTTTGGTGGTTTCGAATCTCTCAAAGTTTTTGGTTCGAAGTTCAAGTTATATGATTTTCAATTCCCGGATCCATG ATACGTTTCGCATGTTTCGTCCGTTTCCTCTCTTCTTCGTGTGTTAGTGTCACGTGCGTTAGGAAATTCTGGTAGACCAATACAAGAAAACATTATTGGAATTTTTTCCAGCTAAGCCAG CAGTGTTTCTTTGTGCAGAAAAATAATTTCGTGAAATTTAAAATTTTAAACTTGTGAGAATTTTCTTCTAACGATAACAAATTATCCAATATTTACCTATACGTTGCGAAACTTAAAGAA TCGTTCGTAATAAAAAAAAATCAGGCTTTTTGGGTCAACTTTAGGCATTTATACAAATGTTTTGATGTTCTGTCATCTTAACCACTAAATCTGGTATAGCACAGAAATGTTGATTCACCC CGAAAATGGGCCTGTTACACGATCGGCAATTAATCTGATAAAACGTCATAAATATCTAACGGCCCCATTCTATAGAGTATTGATTTTTTTTTATTTTTATTTTCATCAAAAACCAATACT GATCTCGATACGATCGTGAAATTATCAACTTTCACGTGTGACTAAACAAAGACGAAACCATCAACATGCTGAGTCTAAGCCAGTAGTGATCATGCATTTTGAACCTGGTCCGGCTCAGTT TGCGTCATTTTTTTATTTAGTTTACATTTCAAGTTTCAATATGAGAAAACTTTGACAAAAAAAATTGTCACTAGTTTTAAGAATTTAAGAGATCTAAACCTGAGTGGTCTACTTTCCGTA TCAGCTGCTCACACTATCGGAACAACGGCCTGCTTCTTCATGTCCAAACGGCTCTATGATTTCTTACCTGGTGGCCAACCTGACCCGACTATCAATCCAACATTCCTACCCGAATTAACC ACTCAGTGCCCACAAAATGGTGACATAAACGTCCGTTTACCAATTGACCGGTTCAGCGAACGGCTATTCGACAAGCAGATTCTGCAAAACATAAAGGATGGTTTTGCTGTGCTTCAGACC GACGCAGGTCTTTACGAGGATGTAACGACCAGACAGGTCGTGGATTCCTATCTTGGGATGCTAAATCCATTCTTTGGGCCAACATTCGAGTCTGATTTCGTTAAGGCGATCGTAAAGATG GGGAAGATTGGTGTGAAGACTGGTTTCAAAGGGGAGATTCGACGGGTTTGCTCGGCCTTCAATTGA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGTTTGGGCAAATGCTAAGATGAGGCTAGCTTTGTCTCTTGTTACGGTTTTCTTCGGCATCTCTCTTGCTAATCTTGAAGTCGGATTTTACTCCAATACATGCCCTCAAGCCGAGTCA ATCGTTAAGAGGGTTGTCTCAGGGGCTGCTCTTTCCGACCCTAACCTCCCAGCCATACTTCTACGGCTCCATTTCCATGATTGCTTTGTTGAGGGATGTGATGGCTCGATCCTCGTGAAC AACGGAGCAATCTCTGAAAAGAATGCATTTGGACATGAAGGCGTTAGAGGATTTGAGATAGTAGAAGCCGTCAAAGCCGAGCTTGAAGCTGCATGCCCCGGTGTTGTCTCCTGCTCAGAC ATTGTTGCCTTGGCTGCACGTGATGCCATATCTTTGGCGAATGGACCGGCGTATGAGGTGCCAACTGGGCGGAGAGATGGTCGGGTTTCGAACATGTCATTGGCTAAGGACATGCCGGAG GTGAGTGACTCGATTGAGATACTAAAGGCTAAGTTCATGCAGAAAGGACTCAACGCCAAAGACCTCGTGCTTCTCAGTGCTGCTCACACTATCGGAACAACGGCCTGCTTCTTCATGTCC AAACGGCTCTATGATTTCTTACCTGGTGGCCAACCTGACCCGACTATCAATCCAACATTCCTACCCGAATTAACCACTCAGTGCCCACAAAATGGTGACATAAACGTCCGTTTACCAATT GACCGGTTCAGCGAACGGCTATTCGACAAGCAGATTCTGCAAAACATAAAGGATGGTTTTGCTGTGCTTCAGACCGACGCAGGTCTTTACGAGGATGTAACGACCAGACAGGTCGTGGAT TCCTATCTTGGGATGCTAAATCCATTCTTTGGGCCAACATTCGAGTCTGATTTCGTTAAGGCGATCGTAAAGATGGGGAAGATTGGTGTGAAGACTGGTTTCAAAGGGGAGATTCGACGG GTTTGCTCGGCCTTCAATTGA |
Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGTTTGGG CAAATGCTAA GATGAGGCTA GCTTTGTCTC TTGTTACGGT TTTCTTCGGC ATCTCTCTTG CTAATCTTGA AGTCGGATTT TACTCCAATA CATGCCCTCA AGCCGAGTCA
ATCGTTAAGA GGGTTGTCTC AGGGGCTGCT CTTTCCGACC CTAACCTCCC AGCCATACTT CTACGGCTCC ATTTCCATGA TTGCTTTGTT GAGGGATGTG ATGGCTCGAT CCTCGTGAAC
AACGGAGCAA TCTCTGAAAA GAATGCATTT GGACATGAAG GCGTTAGAGG ATTTGAGATA GTAGAAGCCG TCAAAGCCGA GCTTGAAGCT GCATGCCCCG GTGTTGTCTC CTGCTCAGAC
ATTGTTGCCT TGGCTGCACG TGATGCCATA TCTTTGGCGA ATGGACCGGC GTATGAGGTG CCAACTGGGC GGAGAGATGG TCGGGTTTCG AACATGTCAT TGGCTAAGGA CATGCCGGAG
GTGAGTGACT CGATTGAGAT ACTAAAGGCT AAGTTCATGC AGAAAGGACT CAACGCCAAA GACCTCGTGC TTCTCAGTGC TGCTCACACT ATCGGAACAA CGGCCTGCTT CTTCATGTCC
AAACGGCTCT ATGATTTCTT ACCTGGTGGC CAACCTGACC CGACTATCAA TCCAACATTC CTACCCGAAT TAACCACTCA GTGCCCACAA AATGGTGACA TAAACGTCCG TTTACCAATT
GACCGGTTCA GCGAACGGCT ATTCGACAAG CAGATTCTGC AAAACATAAA GGATGGTTTT GCTGTGCTTC AGACCGACGC AGGTCTTTAC GAGGATGTAA CGACCAGACA GGTCGTGGAT
TCCTATCTTG GGATGCTAAA TCCATTCTTT GGGCCAACAT TCGAGTCTGA TTTCGTTAAG GCGATCGTAA AGATGGGGAA GATTGGTGTG AAGACTGGTT TCAAAGGGGA GATTCGACGG
GTTTGCTCGG CCTTCAATTG A
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Retrieve as FASTA
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