Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
365 (338) |
PWM (Da): |
39378.76 (36336.1) |
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PI (pH):
| 7.75 (7.44) |
Peptide Signal:
| cut: 28 range:28-365 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MSKLHHQHCK SALLLLLFWS LDAVALSVDL GVVNEIVGGQ NLGNAKSKAP GFYSDQLTVG FYRWSCPAAE SIVFEAVRTA YMKNSGVAPG LIRMHFHDCF VRGCDGSVLI DSTANNTAEK
DSPANNPSLH GFEVIDAAKS RLEVVCPNTV SCADILAFAA RDSATLASPY GYGLSWDVPA GRRDGRISRA SDIAGNLPPP FLNVTQLTQF FAAKGLSQEE MVILSGAHTI GVSHCSSLVS
RLYNFNATFQ TDPSLDPNYA NILKARCPQG SPSNVKTTVP MEIVTPNTLD NVYYDELKRK HGLFTSDAAL LTDPNTNNVV NANSGRPNLH RWQLRFGAAM VKMGKISVLS GNEGEIRQNC
RVINS
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (incorrect prediction, extra intron in the last exon due a frame shift, contains a second ORF full of NN with large introns => could be two PRG!!!) and 3 ESTs. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTCGAAGC TTCATCATCA GCACTGTAAA TCAGCCCTCC TCCTCCTATT ATTTTGGTCC TTAGATGCTG TTGCACTAAG CGTGGACCTT GGAGTTGTTA ATGAAATAGT GGGTGGACAG
AACCTCGGAA ATGCCAAATC TAAAGCACCG GGTTTTTATA GTGATCAACT TACAGTGGGT TTCTACCGTT GGAGTTGTCC AGCTGCTGAA TCCATTGTGT TTGAGGCTGT GCGAACTGCA
TACATGAAAA ACAGTGGAGT AGCTCCTGGA CTCATTCGAA TGCATTTCCA TGATTGTTTC GTCAGGGTAA GGCGCAATAC TCATTAATCC ATCATACCAT CAATTTATCA ACATTTTCTC
CTGTCTCTGC TAATACTTTA TCACCTATTG CTTTCAGGGA TGCGATGGGT CTGTTCTCAT AGACTCCACT GCCAACAACA CCGCAGAGAA GGATAGTCCT GCTAACAATC CGAGTCTTCA
CGGATTTGAA GTGATTGACG CAGCGAAATC AAGATTAGAG GTGGTCTGCC CGAACACTGT TTCTTGTGCA GACATCCTCG CATTTGCTGC TAGAGATAGC GCAAAGCTGG TAATTTTATT
GTCTTTTCTT TCGCTCGCAA TCTTATGGAA AATGTCCTGC ACGACAAATA CGCAAATATT GAAAAGCCAC TAATTTTTTT AATAAATGTT GGCAGGCATC TCCATATGGG TATGGTCTCA
GTTGGGATGT TCCGGCTGGA CGGAGGGATG GAAGAATTTC ACGAGCTTCA GATATCGCGG GAAACTTACC TCCCCCATTT TTGAATGTGA CACAGTTAAC CCAATTCTTT GCAGCCAAAG
GTCTGTCACA GGAAGAGATG GTCATACTCT CGGGTACGTA CTAATTATTG TGAATGTTTA TTAACACACT CTATTGCAAG TTGCAACCAG TCCCAGTACC TAGCAGTCCC AATAGTAATA
TTGTATTTAA AATCATTAAA AATATTTTTC GGAAAATTTT ATTAGTAGAA ATGCTGAAGT TATAAATATT GAGTATTTAG AAGAACATAA AGCGTTAATT TGTAAATTAT AAATCACAAC
AATTGAAACT AACTTAATTT GTTAATAGTA TGAATATTGC TATATAAATG TTCATCATTG TAATTAATTT GTTATGTTAA TGCAACGTTG GGTGTATGCG TGCAGGAGCG CACACAATTG
GCGTGTCTCA CTGCTCTTCA TTCGTAAGCA GGCTCTACAA CTTCAACGCT ACTTTTCAGA CGGACCCATC TCTCGATCCT AATTATGCTA ACATACTCAA GGCACGCTGT CCCCAGGGAA
GCCCTAGCAA CGTGAAAACG ACAGTCCCCA TGGAGATTGT GACGCCCAAC ACCCTGGAGT CTGGACAATG TGTACTACGA CGAGCTTAAA AGGAAGCACG GGTTGTTTAC CTCCGATGCA
GCTCTGCTTA CAGATCCAAA CACCAACAAT GTGGTGAACG CAAACTCAGG ACGCCCTAAC CTGCACAGGT GGCAGCTAAG GTTTGGTGCA GCGATGGTTA AGATGGGAAA GATCAGCGTA
TTAAGTGGGA ATGAGGGAGA AATCCGGCAC AACTGCAGGG TCATTAACAG CTAA
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Retrieve as FASTA
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