Entry information : PtaPrx32(PTA00038329)
Entry ID 2092
Creation 2007-08-31 (Christophe Dunand)
Last sequence changes 2007-08-31 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2021-01-02 (Christophe Dunand)
Peroxidase information: PtaPrx32(PTA00038329)
Name PtaPrx32(PTA00038329)
Class Class III peroxidase    [Orthogroup: Prx015]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx32
start..stop
S start..stop
PabPrx183 491 7e-177 94..364 1..271
PabPrx231 484 7e-173 9..364 7..359
PtaPrx15 483 2e-172 10..364 8..359
PtaPrx19 471 6e-168 57..365 33..341
Literature and cross-references PtaPrx32(PTA00038329)
Literature Pratt,L. et al., An EST database from well-watered loblolly pine (Pinus taeda) roots, unpublished.
Protein sequence: PtaPrx32(PTA00038329)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   365 (338)
PWM (Da):   %s   39378.76 (36336.1)  
PI (pH):   %s   7.75 (7.44) Peptide Signal:   %s   cut: 28 range:28-365
Sequence
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Send to Peroxiscan
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MSKLHHQHCK SALLLLLFWS LDAVALSVDL GVVNEIVGGQ NLGNAKSKAP GFYSDQLTVG FYRWSCPAAE SIVFEAVRTA YMKNSGVAPG LIRMHFHDCF VRGCDGSVLI DSTANNTAEK  DSPANNPSLH GFEVIDAAKS RLEVVCPNTV SCADILAFAA RDSATLASPY GYGLSWDVPA GRRDGRISRA SDIAGNLPPP FLNVTQLTQF FAAKGLSQEE MVILSGAHTI GVSHCSSLVS  RLYNFNATFQ TDPSLDPNYA NILKARCPQG SPSNVKTTVP MEIVTPNTLD NVYYDELKRK HGLFTSDAAL LTDPNTNNVV NANSGRPNLH RWQLRFGAAM VKMGKISVLS GNEGEIRQNC 
RVINS 

Retrieve as FASTA  
Remarks Complete sequence from genomic (incorrect prediction, extra intron in the last exon due a frame shift, contains a second ORF full of NN with large introns => could be two PRG!!!) and 3 ESTs.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCGAAGC TTCATCATCA GCACTGTAAA TCAGCCCTCC TCCTCCTATT ATTTTGGTCC TTAGATGCTG TTGCACTAAG CGTGGACCTT GGAGTTGTTA ATGAAATAGT GGGTGGACAG  AACCTCGGAA ATGCCAAATC TAAAGCACCG GGTTTTTATA GTGATCAACT TACAGTGGGT TTCTACCGTT GGAGTTGTCC AGCTGCTGAA TCCATTGTGT TTGAGGCTGT GCGAACTGCA  TACATGAAAA ACAGTGGAGT AGCTCCTGGA CTCATTCGAA TGCATTTCCA TGATTGTTTC GTCAGGGTAA GGCGCAATAC TCATTAATCC ATCATACCAT CAATTTATCA ACATTTTCTC  CTGTCTCTGC TAATACTTTA TCACCTATTG CTTTCAGGGA TGCGATGGGT CTGTTCTCAT AGACTCCACT GCCAACAACA CCGCAGAGAA GGATAGTCCT GCTAACAATC CGAGTCTTCA  CGGATTTGAA GTGATTGACG CAGCGAAATC AAGATTAGAG GTGGTCTGCC CGAACACTGT TTCTTGTGCA GACATCCTCG CATTTGCTGC TAGAGATAGC GCAAAGCTGG TAATTTTATT  GTCTTTTCTT TCGCTCGCAA TCTTATGGAA AATGTCCTGC ACGACAAATA CGCAAATATT GAAAAGCCAC TAATTTTTTT AATAAATGTT GGCAGGCATC TCCATATGGG TATGGTCTCA  GTTGGGATGT TCCGGCTGGA CGGAGGGATG GAAGAATTTC ACGAGCTTCA GATATCGCGG GAAACTTACC TCCCCCATTT TTGAATGTGA CACAGTTAAC CCAATTCTTT GCAGCCAAAG  GTCTGTCACA GGAAGAGATG GTCATACTCT CGGGTACGTA CTAATTATTG TGAATGTTTA TTAACACACT CTATTGCAAG TTGCAACCAG TCCCAGTACC TAGCAGTCCC AATAGTAATA  TTGTATTTAA AATCATTAAA AATATTTTTC GGAAAATTTT ATTAGTAGAA ATGCTGAAGT TATAAATATT GAGTATTTAG AAGAACATAA AGCGTTAATT TGTAAATTAT AAATCACAAC  AATTGAAACT AACTTAATTT GTTAATAGTA TGAATATTGC TATATAAATG TTCATCATTG TAATTAATTT GTTATGTTAA TGCAACGTTG GGTGTATGCG TGCAGGAGCG CACACAATTG  GCGTGTCTCA CTGCTCTTCA TTCGTAAGCA GGCTCTACAA CTTCAACGCT ACTTTTCAGA CGGACCCATC TCTCGATCCT AATTATGCTA ACATACTCAA GGCACGCTGT CCCCAGGGAA  GCCCTAGCAA CGTGAAAACG ACAGTCCCCA TGGAGATTGT GACGCCCAAC ACCCTGGAGT CTGGACAATG TGTACTACGA CGAGCTTAAA AGGAAGCACG GGTTGTTTAC CTCCGATGCA  GCTCTGCTTA CAGATCCAAA CACCAACAAT GTGGTGAACG CAAACTCAGG ACGCCCTAAC CTGCACAGGT GGCAGCTAAG GTTTGGTGCA GCGATGGTTA AGATGGGAAA GATCAGCGTA 
TTAAGTGGGA ATGAGGGAGA AATCCGGCAC AACTGCAGGG TCATTAACAG CTAA 

Retrieve as FASTA