Sequence Properties
first value : protein second value (mature protein)
|
Length (aa): |
336 (310) |
PWM (Da): |
36723.61 (33869.1) |
|
PI (pH):
| 8.55 (8.39) |
Peptide Signal:
| cut: 27 range:27-336 |
|
Sequence 0
Send to BLAST
Send to Peroxiscan
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASIAAMRIA ITRVWCVVLF VTCVYGQLNP HFYDKTCPGA LSIVNSTVVQ AISEERRIGA SLLRLHFHDC FVNGCDGSVL LDDTSSFTGE KTAVPNNNSA RGFEVVDKIK KKLEQACSGV
VSCADILAIA ARDSVVTLGG PTWTVMLGRR DSRTASRSDA NNNIPPPTSD LAKLISKFRA QGLSKREMVA LSGAHTIGKA RCVNFRGHIY NDSNIDKAYA KSLQDRCPKS GDDNKLSPLD
YKTPTKFENN YYKNLVAEKG LLHSDQELFN GVSTDSLVTE YSKNVELFER DFTAAIIKMG NITPLTGSQG EIRENCRKRN SDSAIFLSST HLIHNE
|
Retrieve as FASTA
|
|
Remarks |
Complete sequence from genomic (incorrect prediction, contains two partial ORFs) and 8 + 15 ESTs (two unigenes), |
DNA ►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCTA TCGCTGCAAT GAGGATCGCT ATTACACGCG TGTGGTGTGT TGTTTTATTC GTAACTTGTG TTTATGGGCA GCTTAACCCA CACTTTTACG ATAAAACTTG TCCTGGGGCG
TTATCCATAG TCAATTCTAC TGTAGTTCAA GCAATCTCGG AGGAACGTCG AATTGGAGCA TCGTTGCTTC GCCTTCATTT TCACGACTGT TTCGTTAATG TATTTATAAT TACGTCGCAC
TTCTACCCTC TTATATACAT GGCATTGCGT TTCCGGAATC GAATTACAGC ATAAAAGTTA TATGTTATTC TTATTACTAA ATTTAAGTCG TCTTCTCCTC TTGCAGGGTT GTGATGGGTC
TGTTCTTCTG GACGATACCT CGAGTTTTAC AGGCGAAAAG ACAGCAGTTC CCAATAATAA TTCCGCCAGA GGTTTTGAGG TCGTTGATAA AATAAAGAAG AAGCTGGAGC AGGCTTGCAG
CGGTGTCGTA TCATGTGCTG ACATTTTGGC AATTGCTGCT CGCGATTCTG TTGTAACGGT AAAATTCACA ACGCACAGAT GTTTCTTTTT CGGTTTCACC ATTCCAATAG AAATTTTGTG
AGCATATAAG TTTAGTTATA AGTTTTGGTT TCTTCTGCCC ACTTATCTTT CTCTCGAAGC AATGTTTCTA TTATCTTGCT AAGTTTCTAT TAACATTCGA CCATTTTGCC AGTTGGGAGG
TCCTACATGG ACAGTGATGC TTGGAAGAAG AGATTCCAGG ACTGCAAGTC GAAGTGATGC CAACAACAAT ATTCCCCCTC CCACTTCTGA CCTTGCCAAG CTCATCTCCA AATTTCGAGC
TCAGGGACTT TCTAAACGGG AAATGGTTGC ACTTTCAGGT AACCAAGAAC ACTGCACGCC ACTCTAACCT CATTCTAATT GTAACTTGGC TTCTAAACCA GTTTTCTTGA TATTTTAGGT
GCTCACACCA TTGGTAAAGC GCGTTGCGTG AACTTCAGGG GTCACATATA CAATGATTCA AACATAGACA AAGCGTACGC CAAATCTTTA CAAGACCGCT GCCCCAAGAG TGGAGACGAC
AACAAGTTGT CGCCACTTGA TTACAAAACG CCAACAAAGT TTGAAAACAA TTACTACAAA AATTTGGTAG CAGAGAAAGG ACTTTTGCAC TCCGATCAAG AGCTTTTCAA TGGAGTGTCT
ACTGATTCTC TGGTTACTGA GTACAGCAAA AACGTGGAAC TTTTCGAGAG AGACTTCACT GCTGCAATTA TCAAGATGGG AAATATCACG CCTCTAACTG GTTCCCAAGG AGAGATCCGG
GAGAACTGCA GAAAGCGTAA CTCAGATAGT GCCATCTTCC TTTCCAGCAC GCATCTGATA CACAATGAAT AA
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCTA TCGCTGCAAT GAGGATCGCT ATTACACGCG TGTGGTGTGT TGTTTTATTC GTAACTTGTG TTTATGGGCA GCTTAACCCA CACTTTTACG ATAAAACTTG TCCTGGGGCG
TTATCCATAG TCAATTCTAC TGTAGTTCAA GCAATCTCGG AGGAACGTCG AATTGGAGCA TCGTTGCTTC GCCTTCATTT TCACGACTGT TTCGTTAATG GTTGTGATGG GTCTGTTCTT
CTGGACGATA CCTCGAGTTT TACAGGCGAA AAGACAGCAG TTCCCAATAA TAATTCCGCC AGAGGTTTTG AGGTCGTTGA TAAAATAAAG AAGAAGCTGG AGCAGGCTTG CAGCGGTGTC
GTATCATGTG CTGACATTTT GGCAATTGCT GCTCGCGATT CTGTTGTAAC GTTGGGAGGT CCTACATGGA CAGTGATGCT TGGAAGAAGA GATTCCAGGA CTGCAAGTCG AAGTGATGCC
AACAACAATA TTCCCCCTCC CACTTCTGAC CTTGCCAAGC TCATCTCCAA ATTTCGAGCT CAGGGACTTT CTAAACGGGA AATGGTTGCA CTTTCAGGTG CTCACACCAT TGGTAAAGCG
CGTTGCGTGA ACTTCAGGGG TCACATATAC AATGATTCAA ACATAGACAA AGCGTACGCC AAATCTTTAC AAGACCGCTG CCCCAAGAGT GGAGACGACA ACAAGTTGTC GCCACTTGAT
TACAAAACGC CAACAAAGTT TGAAAACAAT TACTACAAAA ATTTGGTAGC AGAGAAAGGA CTTTTGCACT CCGATCAAGA GCTTTTCAAT GGAGTGTCTA CTGATTCTCT GGTTACTGAG
TACAGCAAAA ACGTGGAACT TTTCGAGAGA GACTTCACTG CTGCAATTAT CAAGATGGGA AATATCACGC CTCTAACTGG TTCCCAAGGA GAGATCCGGG AGAACTGCAG AAAGCGTAAC
TCAGATAGTG CCATCTTCCT TTCCAGCACG CATCTGATAC ACAATGAATA A
|
Retrieve as FASTA
|
|