Entry information : PtaPrx44(PTA00066863)
Entry ID 2104
Creation 2007-09-04 (Christophe Dunand)
Last sequence changes 2007-09-04 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-30 (Christophe Dunand)
Peroxidase information: PtaPrx44(PTA00066863)
Name PtaPrx44(PTA00066863)
Class Class III peroxidase    [Orthogroup: Prx184]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx44
start..stop
S start..stop
PabPrx181 545 0 1..337 1..335
PabPrx76 541 0 1..337 35..370
PabPrx77 511 0 1..337 1..356
PabPrx127 501 3e-180 1..337 1..335
Literature and cross-references PtaPrx44(PTA00066863)
Literature Pratt,L. et al., An EST database from untreated loblolly pine (Pinus taeda) roots, unpublished.
EST ref. GenBank:   CX652846.1 [5' end]   CF671224 [3' end]
Cluster/Prediction ref. UniGene:   Pta.16781
Protein sequence: PtaPrx44(PTA00066863)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   337 (312)
PWM (Da):   %s   35855.32 (33295.9)  
PI (pH):   %s   8.54 (8.00) Peptide Signal:   %s   cut: 26 range:26-337
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAKALCRKAA LFTVLFCALA RAALGDNLAV GYYKNICPAA EPIVLGVVKS AFHSSPEIAA KLIRLHFHDC FVRGCDGSVL IDSISGQFVA EKDSPANNPS LGGFNVIDNA KTLLEKICPK  VVSCADIVAF AARDSAFLAS PIRYPLWWDV PAGRKDGNIS LASNIPGNLP PPTFNVTQLT QIFATKGLSQ DEMVTLSGAH TIGVSHCTSF VSRLYNFNGT NATDPSLDPS YAQKLKQKCP 
QGSPNNANTT VVMDPETPFI LDNLYYNDVI AKRGLFTSDA TLITNLNTKS SVLGNSGSYK LVAWQKKFAA AMIKMGEISV LTGTQGGVHA NCRVANS 

Retrieve as FASTA  
Remarks Complete sequence from genomic (incorrect prediction , only exons 1 and 2 were predicted) and 17 ESTs. Unigene contains two populations of sequences.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAAAGG CTCTGTGCCG TAAGGCTGCC CTCTTTACCG TATTATTTTG TGCCTTAGCT AGGGCTGCAT TAGGTGACAA CCTTGCAGTG GGCTATTACA AAAATATTTG TCCAGCGGCG  GAACCCATTG TGTTGGGGGT GGTTAAAAGC GCATTCCATA GCTCTCCTGA AATAGCCGCT AAGCTTATAC GGTTGCATTT CCACGATTGT TTTGTCAGGG TCGGTATCTG AGTTACTTTT  TATAATGTAC TACTCTCAGT TATTACAGTG TAAATGAATA ATGTTTTTGA AATATGGATT TGGATCTCCT TCACTTTCAG GGATGCGATG GCTCCGTTCT CATCGACTCC ATTTCCGGCC  AGTTCGTAGC GGAGAAAGAC TCTCCGGCTA ACAACCCGAG TCTCGGAGGA TTCAACGTGA TTGACAACGC GAAAACGCTA TTAGAGAAGA TCTGCCCAAA GGTGGTGTCC TGTGCAGATA  TAGTCGCGTT TGCGGCTAGA GATAGCGCAT TTCTGGTATT CGTCTTAAAC ATCATACACA TCACGACTAT TAAATTAATT ATAGCATACC ATCACAACAA TGCTCAATGC TTACTAATAA  TGCATCGGAA CTGATTGTAG GCATCGCCCA TTCGATATCC CCTCTGGTGG GACGTTCCGG CTGGAAGAAA GGATGGAAAT ATTTCACTAG CTTCCAATAT TCCGGGAAAT CTGCCTCCAC  CTACCTTCAA TGTAACCCAG CTAACTCAGA TATTTGCAAC CAAAGGTCTA TCCCAGGACG AGATGGTTAC ATTGTCAGGT ATATTCTGAC CCCTGAAAAT CATTAACATG TCAACGCCAG  TAGATGGTAA TAATGGTTGT GTAATAATAG TAGAGTATAA TCATGTTTGT GTTGTTTGGG AGAATGCAGG AGCACACACA ATTGGTGTTT CTCACTGCAC TTCATTCGTG AGTAGGCTCT  ACAATTTCAA CGGCACGAAT GCCACCGACC CGTCCCTTGA TCCCTCGTAT GCTCAGAAAC TGAAGCAAAA GTGTCCCCAA GGCAGCCCCA ACAACGCCAA CACGACCGTG GTCATGGATC  CTGAAACGCC ATTCATCCTA GACAACTTGT ATTACAACGA CGTTATAGCT AAACGTGGTT TGTTTACATC CGATGCAACT CTGATTACAA ATCTAAACAC CAAATCCAGT GTCTTGGGAA  ACTCGGGGTC TTATAAGCTG GTCGCGTGGC AGAAAAAGTT TGCTGCTGCA ATGATAAAAA TGGGAGAGAT TAGCGTATTG ACTGGCACCC AGGGAGGAGT CCACGCCAAC TGTAGAGTTG 
CCAACAGTTA A 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCAAAGG CTCTGTGCCG TAAGGCTGCC CTCTTTACCG TATTATTTTG TGCCTTAGCT AGGGCTGCAT TAGGTGACAA CCTTGCAGTG GGCTATTACA AAAATATTTG TCCAGCGGCG  GAACCCATTG TGTTGGGGGT GGTTAAAAGC GCATTCCATA GCTCTCCTGA AATAGCCGCT AAGCTTATAC GGTTGCATTT CCACGATTGT TTTGTCAGGG GATGCGATGG CTCCGTTCTC  ATCGACTCCA TTTCCGGCCA GTTCGTAGCG GAGAAAGACT CTCCGGCTAA CAACCCGAGT CTCGGAGGAT TCAACGTGAT TGACAACGCG AAAACGCTAT TAGAGAAGAT CTGCCCAAAG  GTGGTGTCCT GTGCAGATAT AGTCGCGTTT GCGGCTAGAG ATAGCGCATT TCTGGCATCG CCCATTCGAT ATCCCCTCTG GTGGGACGTT CCGGCTGGAA GAAAGGATGG AAATATTTCA  CTAGCTTCCA ATATTCCGGG AAATCTGCCT CCACCTACCT TCAATGTAAC CCAGCTAACT CAGATATTTG CAACCAAAGG TCTATCCCAG GACGAGATGG TTACATTGTC AGGAGCACAC  ACAATTGGTG TTTCTCACTG CACTTCATTC GTGAGTAGGC TCTACAATTT CAACGGCACG AATGCCACCG ACCCGTCCCT TGATCCCTCG TATGCTCAGA AACTGAAGCA AAAGTGTCCC  CAAGGCAGCC CCAACAACGC CAACACGACC GTGGTCATGG ATCCTGAAAC GCCATTCATC CTAGACAACT TGTATTACAA CGACGTTATA GCTAAACGTG GTTTGTTTAC ATCCGATGCA  ACTCTGATTA CAAATCTAAA CACCAAATCC AGTGTCTTGG GAAACTCGGG GTCTTATAAG CTGGTCGCGT GGCAGAAAAA GTTTGCTGCT GCAATGATAA AAATGGGAGA GATTAGCGTA 
TTGACTGGCA CCCAGGGAGG AGTCCACGCC AACTGTAGAG TTGCCAACAG TTAA 

Retrieve as FASTA