Entry information : PtaPrx46(PTA00082889)
Entry ID 2106
Creation 2007-08-31 (Christophe Dunand)
Last sequence changes 2007-08-31 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-30 (Christophe Dunand)
Peroxidase information: PtaPrx46(PTA00082889)
Name PtaPrx46(PTA00082889)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue types Cones
Roots
Stems
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx46
start..stop
S start..stop
PtaPrx66 663 0 1..339 1..339
PabPrx85 588 0 1..339 1..340
PtaPrx87 514 0 22..338 26..342
PtaPrx67 513 0 22..338 26..342
Literature and cross-references PtaPrx46(PTA00082889)
Literature Whetten,R.W. et al., The Pine Gene Discovery Project, unpublished.
EST ref. GenBank:   CO368475 [5' end]   CX650140.1 [3' end]
Cluster/Prediction ref. UniGene:   Pta.2421 [5' end]   Pta.18919 [3' end]
Protein sequence: PtaPrx46(PTA00082889)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   339
PWM (Da):   %s   36714.67  
PI (pH):   %s   8.24
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAKTFSSCIA LSPICSPQAY FFVISLLLSY GYSQAALVPN FYASSCPKAE EIVKSVVEKA VIKEARIAAS LIRLQFHDCF AQGCDASLLL DNSSKIVTEK GSNANNNSAR GFTVVDQIKS  ALEAACPKTV SCADILALAA RDSVVISGGP TFPVFLGRRD STSASLSLSN NDIPAPNSTL QTLITKFKRQ GLDDVDLVAL SGSHTIGQSR CTSFKQRLYN QSGNGQPDFT LDKPYYSELK 
TRCPNSGGDN NLFPLDFVSP TKFDNYYFKH LVSGHGLLNS DEELYAKGKG KTKELVEAYA ENEEAFFKQF AISMVKLANI NPLTGTKGEI RVNCRRVLG 

Retrieve as FASTA  
Remarks Complete sequence from genomic (incorrect prediction, contains two ORF and exon 1 was not predicted) and 9 + 12 ESTs (two unigenes).
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCCAAAA CTTTTTCCTC CTGCATTGCT CTTTCACCAA TTTGCTCTCC ACAGGCATAT TTCTTCGTAA TATCATTGTT ATTATCCTAT GGGTATTCCC AAGCTGCTTT GGTTCCAAAT  TTTTATGCCA GTTCATGCCC CAAGGCCGAG GAAATAGTGA AATCAGTAGT AGAGAAGGCT GTGATTAAGG AAGCTCGAAT TGCAGCGTCC TTAATCAGGC TTCAATTCCA TGATTGCTTT  GCCCAGGTAA TCTTTTATAT ATATATATAT ATATACTCTG CTAGTTGTCA TAATTCATCT AATTGCTAGC TACCAGTATT AACTAATCAG CTCGTTAATA ACAAGATTAA TGTGTGTATA  CAATTAATGG CATGACAGGG GTGTGACGCA TCTTTGCTGC TCGATAACAG TTCAAAAATT GTGACTGAGA AGGGATCAAA TGCGAACAAT AACTCTGCTA GGGGATTTAC AGTCGTTGAT  CAGATTAAGA GTGCACTGGA GGCGGCGTGC CCAAAAACTG TATCCTGTGC AGATATTCTC GCTCTTGCAG CTCGTGACTC AGTGGTTATA GTAATACATT ATATACTCAT CTATTTATTA  TTATATATTA CATCTATTTA TTATGGTGTT TGTGTTTTGA ATAGATTTAC AAGTAGTCAT ATTTTTGTTA TTGAAAAAAT AGTCTTGAAA TTATTTTAAT GATAGATTTT AGAAATATTT  TGGATTTTAA ATATAACAAT GGAATTAGTT GTTTTTACTT AAAATAATTT CTTATGAGTA AATTTATTTC TGGATTCTAG ATATCAAGAA TATTCTGTAA TCTTATGATC ATCATTTCAT  GGTCATCAGC TAGGTCAAAT GTTGATTTTT TCTAGAATAT TCAGATATCC AGTCAATTCC ATTCAAAAAT ATTCCAAAAA ATACTGATAC ATTATTGTTA TGGATGAATA TTGTCAGAGT  GGAGGTCCAA CCTTTCCGGT TTTTCTGGGA AGGAGAGACT CGACGAGTGC AAGCTTGAGT CTGTCCAACA ACGATATCCC AGCGCCCAAC TCAACTCTCC AAACTCTCAT TACCAAGTTT  AAGCGACAGG GTCTGGATGA TGTAGACTTG GTTGCCCTCT CCGGTATCGT ATTATGTTTA TTTGTATTCC CATATTTTAT ACTACATAAT TTAAATCGCC ATTCATTCAT TTTGTTTTGT  AGTATTGAAT ACCAGGTGGA GATTATTAAA AACTAAAATC CAAATAAAAA TGCTAATTAT GCAGGAAGTC ACACCATCGG CCAATCTCGA TGCACAAGTT TCAAGCAGAG GCTTTACAAC  CAGAGTGGAA ATGGGCAGCC AGACTTCACT TTAGACAAAC CCTACTATTC TGAGCTCAAA ACCAGGTGTC CCAACTCCGG AGGAGATAAT AACCTGTTTC CACTCGATTT CGTGAGTCCA  ACCAAATTCG ACAACTACTA CTTCAAGCAC TTGGTCAGCG GGCATGGACT GTTGAACTCC GACGAAGAAT TGTACGCCAA GGGAAAAGGC AAGACGAAGG AGCTAGTGGA AGCATACGCA  GAAAATGAGG AGGCCTTCTT CAAGCAGTTT GCAATATCGA TGGTGAAGTT GGCGAACATC AATCCTCTTA CAGGCACCAA GGGAGAAATC AGGGTCAACT GTCGTCGTGT TCTCGGTTGA 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCCAAAA CTTTTTCCTC CTGCATTGCT CTTTCACCAA TTTGCTCTCC ACAGGCATAT TTCTTCGTAA TATCATTGTT ATTATCCTAT GGGTATTCCC AAGCTGCTTT GGTTCCAAAT  TTTTATGCCA GTTCATGCCC CAAGGCCGAG GAAATAGTGA AATCAGTAGT AGAGAAGGCT GTGATTAAGG AAGCTCGAAT TGCAGCGTCC TTAATCAGGC TTCAATTCCA TGATTGCTTT  GCCCAGGGGT GTGACGCATC TTTGCTGCTC GATAACAGTT CAAAAATTGT GACTGAGAAG GGATCAAATG CGAACAATAA CTCTGCTAGG GGATTTACAG TCGTTGATCA GATTAAGAGT  GCACTGGAGG CGGCGTGCCC AAAAACTGTA TCCTGTGCAG ATATTCTCGC TCTTGCAGCT CGTGACTCAG TGGTTATAAG TGGAGGTCCA ACCTTTCCGG TTTTTCTGGG AAGGAGAGAC  TCGACGAGTG CAAGCTTGAG TCTGTCCAAC AACGATATCC CAGCGCCCAA CTCAACTCTC CAAACTCTCA TTACCAAGTT TAAGCGACAG GGTCTGGATG ATGTAGACTT GGTTGCCCTC  TCCGGAAGTC ACACCATCGG CCAATCTCGA TGCACAAGTT TCAAGCAGAG GCTTTACAAC CAGAGTGGAA ATGGGCAGCC AGACTTCACT TTAGACAAAC CCTACTATTC TGAGCTCAAA  ACCAGGTGTC CCAACTCCGG AGGAGATAAT AACCTGTTTC CACTCGATTT CGTGAGTCCA ACCAAATTCG ACAACTACTA CTTCAAGCAC TTGGTCAGCG GGCATGGACT GTTGAACTCC  GACGAAGAAT TGTACGCCAA GGGAAAAGGC AAGACGAAGG AGCTAGTGGA AGCATACGCA GAAAATGAGG AGGCCTTCTT CAAGCAGTTT GCAATATCGA TGGTGAAGTT GGCGAACATC 
AATCCTCTTA CAGGCACCAA GGGAGAAATC AGGGTCAACT GTCGTCGTGT TCTCGGTTGA 

Retrieve as FASTA