Entry information : PtaPrx47(PTA00006347)
Entry ID 2109
Creation 2007-02-14 (Christophe Dunand)
Last sequence changes 2007-02-14 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-30 (Christophe Dunand)
Peroxidase information: PtaPrx47(PTA00006347)
Name PtaPrx47(PTA00006347)
Class Class III peroxidase    [Orthogroup: Prx188]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type Roots
Inducer Drought
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx47
start..stop
S start..stop
PabPrx04 592 0 1..317 1..317
PtaPrx28 587 0 1..317 1..317
PabPrx184 536 0 1..317 1..318
PabPrx154 523 0 1..317 1..318
Literature and cross-references PtaPrx47(PTA00006347)
Literature Pratt,L. et al., An EST database from loblolly pine (Pinus taeda) roots recovering from drought stress, unpublished
EST ref. GenBank:   CF387396 [5' end]   DR060269 [3' end]
Cluster/Prediction ref. UniGene:   Pta.31056 [3' end]
Protein sequence: PtaPrx47(PTA00006347)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   317 (294)
PWM (Da):   %s   32932.13 (30527.9)  
PI (pH):   %s   6.49 (5.99) Peptide Signal:   %s   cut: 24 range:24-317
Sequence
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Send to Peroxiscan
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MKTLACIALC LLYISSITNS AHGQLTSTFY DKVCPTALSI VKGAVNQAVT NETRMGASLL RLHFHDCFVN GCDGSILLDD NSTFTGEKTA GPNANSVRGF DVIDTIKSQV EAxCSGVVSC  ADILAIAARD SVVQLGGPTW TVLLGRRDST TASLSAANTN IPSPASNLSA LISSFTAHGL STKDLVALSG AHTIGQAQCT TFRARIYNES NIDTSFATSV KSNCPSAGGD NTLSPLDVAT 
PTTFDSNYYT DLGSQKGLLH SDQQLFSGGS TNSQVTTYGA NQNTFFTDFA AAMVNMGNIS PLTGTNGQIR NNCRKAN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (incorrect prediction, end of last exon is missing due to NN) and 3 ESTs. CF387396 compiled in the Unigene Pta.17212 (5').
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAGACTT TGGCATGCAT TGCTCTGTGC CTTCTGTATA TTAGCTCTAT TACTAACTCT GCGCATGGCC AGCTGACCTC AACATTTTAC GACAAAGTGT GTCCCACGGC GCTTTCAATA  GTGAAAGGCG CAGTGAACCA AGCCGTCACC AATGAGACAC GGATGGGGGC GTCCTTGCTC CGCCTTCATT TCCACGACTG CTTTGTTAAT GTGAGAAACC AAAACCAGGA TATCATTTGG  CTGATCAGAA TATAGCAACT TCTTGAGCTT AAATCATATC TGCTCTTTTG CTTAATCCAT GATGTTGAAT TTTGCTTTGG GTTTGTCACA GGGCTGCGAT GGGTCCATAC TGTTGGACGA  CAACTCGACG TTTACCGGAG AAAAAACCGC AGGCCCAAAC GCCAATTCTG TGAGAGGATT CGACGTAATA GACACCATCA AATCTCAAGT TGAGGCAGCC TGCAGTGGTG TCGTGTCATG  CGCCGACATT CTTGCTATCG CTGCACGCGA CTCAGTCGTC CAAGTATTTA ATTGCTCCTT TCTCTTCTCC GTTTACTTAA CTATTCGTAA ATACAATATC TTGCTTTTCT AGGACGATTT  GGAAGGAAAT AACATTGTTC ACTATGTGTG GTTGCAATTT CGCAGCTGGG AGGTCCGACA TGGACGGTAC TTCTGGGAAG GCGAGACTCT ACGACTGCGA GTTTAAGCGC GGCAAACACC  AACATTCCGT CTCCGGCTTC CAATCTGAGC GCCCTCATCT CATCTTTTAC AGCCCATGGT CTTTCTACCA AGGACCTTGT TGCACTCTCG GGTATGATAT TACTCGTGCC ACAGTCTGCA  ATCTCATGCC ATCAAATGAT TGATTTTGTG GTGTCATATT GCACTATTTT CAAATGTAAT AATAATTATC ATCTGGTGAT ATTATTTATG TTATAGGTGC TCATACAATT GGCCAAGCGC  GGTGCACCAC ATTCAGAGCC CGCATCTACA ACGAATCCAA CATTGACACT TCGTTCGCCA CTTCTGTGAA GTCAAACTGC CCAAGCGCTG GTGGGGACAA CACCCTCTCG CCCTTGGATG 
TGGCTACCCC TACCACATTC GACAGCAATT ACTACACTGA TTTGGGAAGC CAAAAGGGAC TTTTGCACTC CGATCAGCAA CTGTTTAGCG GAGGCTCTAC AAA 

Retrieve as FASTA