Entry information : PtaPrx50(PTA00036409)
Entry ID 2112
Creation 2007-09-05 (Christophe Dunand)
Last sequence changes 2007-09-05 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2021-01-01 (Christophe Dunand)
Peroxidase information: PtaPrx50(PTA00036409)
Name PtaPrx50(PTA00036409)
Class Class III peroxidase    [Orthogroup: Prx008]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx50
start..stop
S start..stop
PabPrx18 583 0 1..323 1..323
PtaPrx35 554 0 1..323 1..323
PabPrx203 543 0 1..287 1..287
PabPrx187 540 0 1..323 1..324
Literature and cross-references PtaPrx50(PTA00036409)
Literature Pratt,L. et al., An EST database from untreated loblolly pine (Pinus taeda) roots, unpublished.
EST ref. GenBank:   DR094614.1 [3' end]   DR017707.1 [Fragment]
Cluster/Prediction ref. UniGene:   Pta.17569
Protein sequence: PtaPrx50(PTA00036409)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   323 (296)
PWM (Da):   %s   34265.19 (31491.8)  
PI (pH):   %s   8.98 (9.07) Peptide Signal:   %s   cut: 28 range:28-323
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAALMKSSAC IAVIVFIVCS INNTVHGQLS STFYDKSCPT VLSVVKAGVK QAVAKEQRMG ASLVRLHFHD CFVNGCDGSV LLDDSSKITG EKTAIPNANS ARGFDVIDTI KSQIEKSCSA  VVSCADILAI AARDSVVELG GPSWTVMLGR RDSTTASKSG ANNNIPPPTS SLSKLISLFQ AQGLSTKEMV ALAGGHTIGQ ARCFNFRAHI YNDTNIYSQY ATSLRSKCPS TNGSGDNNLS 
PLDSVSPTVF DKNYYGDLKI KKGLLHSDQQ LFNGGSTDSQ VTTYASNQNL FFSDFAAAMV KMGNIKPLTG TSGQIRKNCR KPN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (incorrect prediction, start of PS , end of exon 3 and exon 4 are missing. PTA00036409 probably contains two other CIII PRxs bit partial due to NN in the sequence) and 12 EST.