Entry information : AtPrx53 (At5g06720 / PER53 / AtperoxP53 / ATPA2 / Atpatpa2a)
| Entry ID | 219 |
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| Creation | 2006-02-10 (Filippo Passardi) |
| Last sequence changes | 2015-06-03 (Christophe Dunand) |
| Sequence status | complete |
| Reviewer | Christophe Dunand |
| Last annotation changes | 2016-01-04 (Christophe Dunand) |
Peroxidase information: AtPrx53 (At5g06720 / PER53 / AtperoxP53 / ATPA2 / Atpatpa2a)
| Name (synonym) | AtPrx53 (At5g06720 / PER53 / AtperoxP53 / ATPA2 / Atpatpa2a) | ||||||||||||||||||||||||||||||||||||
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| Class | Class III peroxidase [Orthogroup: Prx004] | ||||||||||||||||||||||||||||||||||||
| Taxonomy | Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis | ||||||||||||||||||||||||||||||||||||
| Organism | Arabidopsis thaliana [TaxId: 3702 ] | ||||||||||||||||||||||||||||||||||||
| Cellular localisation | N/D |
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| Tissue types | Flowers Nectaries Roots Rosettes Siliques Stamen Abscission Zone |
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| Inducers | Abscissic acid treatment Abscission |
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| Repressor | N/D |
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| Best BLASTp hits |
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| Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '219' 'complement(join(2077567..2077985,2078065..2078230,2078336..2078527,2078627..2078857))' |
Exons►
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Literature and cross-references AtPrx53 (At5g06720 / PER53 / AtperoxP53 / ATPA2 / Atpatpa2a)
| Literature | REFERENCE 1 Kupriyanova EV, Ezhova TA, Shestakov SV. Duplicated peroxidase genes AtPrx53 and AtPrx54 of Arabidopsis thaliana are a recombination hotspot. Dokl Biochem Biophys. 2010 Mar-Apr;431:90-3.
REFERENCE 2 Jin J, Hewezi T, Baum TJ. Arabidopsis peroxidase AtPRX53 influences cell elongation and susceptibility to Heterodera schachtii. Plant Signal Behav. 2011 Nov;6(11):1778-86. REFERENCE 3 Cai S, Lashbrook CC. Stamen abscission zone transcriptome profiling reveals new candidates for abscission control: enhanced retention of floral organs in transgenic plants overexpressing Arabidopsis ZINC FINGER PROTEIN2. Plant Physiol. 2008 Mar;146(3):1305-21. |
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| Protein ref. | UniProtKB: Q42578 |
| DNA ref. | Phytozome 12: Chr5 (2078857..2077567) |
| mRNA ref. | GenBank: NM_120755.2 |
| Cluster/Prediction ref. | Phytozome Gene 12: 19669507 UniGene: At.93 |
| Omic ref. | AtProteome: At5g06720 ATTED-II: At5g06720 e-FP Browser: At5g06720 ePlant: At5g06720 Genevestigator: At5g06720 RnR: At5g06720 TAIR: At5g06720 |
Protein sequence: AtPrx53 (At5g06720 / PER53 / AtperoxP53 / ATPA2 / Atpatpa2a)
| Sequence Properties first value : protein second value (mature protein) |
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| Sequence Send to BLAST Send to Peroxiscan |
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| Remarks | Complete sequence from genomic (chromo 5, 3 introns), 5 cDNA and 18 ESTs. | ||||||||||||
| Promoter► Send to BLAST Send to cis Analysis |
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| Terminator +► Send to BLAST Send to cis Analysis |
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| DNA ► Send to BLAST |
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| CDS► Send to BLAST |
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| cDNA► Send to BLAST |
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