View Redoxidase 224

Entry information : AtPrx58 (At5g19880 / PER58 / AtperoxP58 / ATP42)

Entry ID	224
Creation	2006-02-10 (Filippo Passardi)
Last sequence changes	2015-06-03 (Christophe Dunand)
Sequence status	complete
Reviewer	Achraf Jemmat
Last annotation changes	2015-11-05 (Achraf Jemmat)

Peroxidase information: AtPrx58 (At5g19880 / PER58 / AtperoxP58 / ATP42)

Name (synonym)

AtPrx58 (At5g19880 / PER58 / AtperoxP58 / ATP42)

Class

Class III peroxidase [Orthogroup: Prx099]

Taxonomy

Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis

Organism

Arabidopsis thaliana [TaxId: 3702 ]

Cellular localisation

N/D

Tissue types

Flowers
Siliques

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	AtPrx58 start..stop	S start..stop
AlyPrx58	645	0	1..329	1..329
AhalPrx63	622	0	16..329	1..314
BrPrx58-1Aa_other	613	0	1..329	1..330
TsPrx58-1	610	0	1..329	1..330

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '224' 'complement(join(6720578..6720993,6721103..6721268,6721453..6721650,6722202..6722411))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	6722202..6722411	208	N° 2	6721453..6721650	196	N° 3	6721103..6721268	164	N° 4	6720578..6720993	414
complement(join(6720578..6720993,6721103..6721268,6721453..6721650,6722202..6722 411))

Literature and cross-references AtPrx58 (At5g19880 / PER58 / AtperoxP58 / ATP42)

Protein ref.	UniProtKB: P59120
DNA ref.	Phytozome 12: Chr5 (6722411..6720578)
mRNA ref.	GenBank: NM_121995
Cluster/Prediction ref.	Phytozome Gene 12: 19668060 UniGene: At.31241
Omic ref.	AtProteome: At5g19880 ATTED-II: At5g19880 e-FP Browser: At5g19880 ePlant: At5g19880 Genevestigator: At5g19880 TAIR: At5g19880

Protein sequence: AtPrx58 (At5g19880 / PER58 / AtperoxP58 / ATP42)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	329 (306)
PWM (Da):	35292.84 (32884.4)
PI (pH):	4.92 (4.81)	Peptide Signal:	cut: 24 range:24-329

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MGLSKTIPLVLLPILMFGVLSNAQLTSDFYSTTCPNVTAIARGLI
ERASRNDVRLTAKVMRLHFHDCFVNGCDGSVLLDAAPADGVEGEKEAFQNAGSLDGFEVIDDIKTALENVCPGVVSCADILAIAAEISVALAGGPSLDVLLGRRDGRTAIRADAVAALPLGPDSLEILTSKFSVHNLDTTDLVAL
SGAHTFGRVQCGVINNRLHNFSGNSGQSDPSIEPEFLQTLRRQCPQGGDLTARANLDPTSPDSFDNDYFKNLQNNRGVIESDQILFSSTGAPTVSLVNRFAENQNEFFTNFARSMIKMGN
VRILTGREGEIRRDCRRVN

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 5, introns )3 cDNA and 5 ESTs. Found only in library 10434: RAFL19

Promoter►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

GTGGGGAGGT TAGGACAAAC TGCAGGGTTA TCAATAATTA GCATGTGTGT GTGTTTTCGA GTTTATGTAA TGTTTGGGAG TTGATCGGTC TCGTGTGTAT CAGAATGATC ACGTGTGTAA TAATAAGAAT TAATGGGGTT TGTTGGTTTG CCTAATTAAA AGTGATTTGG TAAACCTGGA AATTTTCATT GATTTTAAAA TTAAACAAGT GTGTTGTAAA CCAAAACATG TGGATTTCAA ACCAAAAAAA TGGATTCGAA ACTCCTAAAA TTTATGATCA TAATAATGCA AGCACAATAT ATAGAAGCTT CCATTGTTAT TAATTTTGAA ATAGCGTCGT ATGTGATTTT CTTGGATTAA GAAAAATTAC TTTGTTAGGG TTGTTAAAGG GTTGCTTTGT TAGTTTTTTA AGGATATATA TCCAAAATAT TTACAACCAA GGGGATATGT AGTTGCAGCA CTTCTTTGAT TCTTTCGAAT AAGAAGATGA AACCAATATT AATCAATCAA TATAATGGAA CAAAATATCG ACCGCCGGTA ATAATTAGCT GAAAGCCTGA AACCAAAATA AGGAAAGGAA AAGAAAAAGT TTTATATACT TCTAGTTTTT ATGGAACGCA AGGAATCTTT GTGCGCATAT GAAAACGACC CCGTCCAATT GTTTTGAGAC AGCTGACTCC GATTAATCAT TTTTTTTGTC AACAAAACTG ACTCTATTAC GATGGCTTGA ATACGACAGT TTCAAATTTA CGCGGAAAGG AATAGTAAGC ATTATGCGAT TCCAACAAGT AATTCATAAT TAGTGTTGAC GTAAGTTAGT TTTTGTTTTC TTTAATTAAC TGATTTTTCA TTAATACTTT TTAATTATAA ACATGAATTT GATTAACTCG ATCGTTTACT TAAAATTCAT TTCAATCAAT TTCAGAGCAA CGACTACAAG TAAAAGACAA TATTTAAAAT TTGAACTTTG TATACGATCT GAGTTTCTAT CTACTGACTA CTGTATTTGT ATCTGAGGTG AATTAGCTAA ATATGAACAT GAAAATATGT TTATCTAGAT AAGTGACAAA ACAGCTGTTA TGAAGCATTC ATATATTTAC GTTTCAAAAT GACAGTTACA TATTTGCATG TTAGATATAT ATGCAACAAA ACAAGGTCAA AACACATGTA TTTTTTTACT CATCGATCGA GTATTACGAT AGTACATACC TAATTTTCTT CAAGTCAATT CTAGCTTTGC TATTTAATTA TTCAACATGC CGTTACGAGC TTCTTTTGTC TTTTTTAATC AGCTGTAGTT ATTTTCTTTC ATCCATGACG ACATACATTG ACATAAATAT ATATATATAT ATATATATAG ATATACATTT TTAAAATAAC TAGGCTAGTT TGATGATTGG ATTTACAGAA AAACTGTAAT ATATTATTGT ATCTTTGGTT TAAGAAAAAA ATGTATGTAA TATACATTTT TATATTTGAA CGAATGGATT TTGTAGGTTG CGAAACTTAT AGAGATTGCT CTCAGCCTTT TATATTCTTG AACAATATCC ATTTTTTCTC AGTTAGACTA CAGTAAATAT TGTGATTAGG AAAAGACACA TATACACACA TGTTTTATGT TCGCTTAGTG GATACTAAAT TTTAGAGTCG TTGTATGTAT AGTTTACAAA TGCAACAAAT TTTAGTAACT TGCAAATGAA GAATTGATTA ATTTATGACC ACTGATGAAT TTTTCCAAAA CAAAAAGAAG CAAATTTTAG TAACTTAATA GAATGCTTAT CATTATATTA TGATTTTTCG TGTCCTTCAA AAAGAAAAGT AAAAGTCTAG ACGAATTGAA CTGAAATGTT TTGTATTTTT CCTGGTACAT GTAGAATTTT CTTCAAACAT TAGGTATAAG CTCTCTATAA AAGGCTACGA
AAGTCTTTCA TTTTAGCATC AACTCCTCTA ATAAGCTTCT TCTTTCTATC CCTCACTTTT ACAAACAAAG GGAGACCAAA A

Retrieve as FASTA

Terminator +►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

TAAGTTTTGC ATGGTTAAAT GATCAAACGT AACTTATTGT TATTCATGAA ATAAGTGTTC TTTAGTTTGT GCTTCTCCAC AATTAATTGT TTTTCTTCTT TTGATTTTAT TTACTGTTAA GCATGCCATT GTTACTTGTA ATTGTAAATC TTATATAATA TTTTTCTTTT TGAAAAAATC CACTATCATG TCTGAAATTA TTATTAGTCC ACCAATGAGG ATTCAACTCC CACCTATGGT TCATTAGACT GATTCAACGG CATTACTGTT CTTATATACG GAAGAAAAGA AGAATATATC AATATTATGA GGCATGTCGC TTGACCGATT CAAAAAGGTA AATTTTATTA CCTCCCTCGA TGAGTTAGTT CGTAATTCCT ATCTAAATTT TTTGAAGATG TCTCGACTCA ATATTCTATA ACTTCCACTT CATTAACGTA TGTTTTTTTT CCCCGGCCAA TGTACCACAC AAGTGATTAG ATCCAAGTTT AAATAAAATG GGAAACCAAA TGTGAGTCAA GTAGTGGAAA AAAGTCACTG AAATTTTCAT TAAAATTTGT TTTGAATTTC GCATATGTTA AGATCCAATG ACACTTTATT ACGAATCGAT ACTAGCTACC AAAAGGAATT TTAACTAAAG ATTTACCCTA ACAGCCAATA TCAATTTCCA GCACCAAATA AACCCTGAAA GGACCTGAGA AAAGTGGCGT CAAAGGGCCC AAAGTTGAGT GTGAACGAGA AGATGGAAAA AGACTCATTT CTTTCATTTA GTATTCGAAT CTAGAGGATA GTTGACTCTC CAATTGTCGT TGCCTCTCTG ATTTTTCAGC TCTTTGATTA TGATTAATTT AGCCATTTCT ATCATTTAGC AAGGAAGATT TGAAAATTTG GCAAAATTTT AGTGGGACAA TGTCGCTTTC AATCTGGAGT ATTTTATCAG ACTCTAGAAT CTACCCCTAA
CTTTATAAAC GAGTGGTGGG AATGTAACCA AAACACGTCG

Retrieve as FASTA

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGGTCTAAGCAAAACTATTCCCTTAGTGTTACTCCCGATTTTGATGTTTGGGGTTTTGAGTAACGCTCAGCTTACCTCTGATTTTTACTCCACGACATGCCCTAACGTCACAGCCATT
GCTCGGGGACTGATCGAGCGAGCAAGCCGTAACGACGTCAGACTCACTGCTAAAGTCATGCGTCTTCACTTTCATGACTGTTTCGTGAACGTAAGATATATTTCTACTCAATACCATATG
TTTGTGATTGGTTTTGGTTTAGTAATGAAACCAATCGTTTAATGTGCATCAGTCCATGTGATCTTATGATTCATCTTGAATCCAAACCAGCATATATTTATGAATGAATATAACTAAACA
TGACTTTACTTTAGGTTTAATGGGGATTAATAATAGTTCATACTCGTTGTTTGACCAAAAAGTGGATTTCAAACAAAAGCAACATTAAAATTAGAGTTTGCATTAGTGGAATCATTTTTC
AAGGACAAATTTGACGTTAATTTCTTTTTGATGTTTGATTATATATATGTTTGACTATAGATTCTGTCTTAATTAATGGTTTCATATGGAGAAAGTAACGGTCTTTCTTAACCCAAATTA
AAATATCTCCTTTTTTTTCCTTCGCTAATCGTTAACTAAGAAAAGTATAGAGTCTTCGTCAAGAAAACATAATTAGGTTTATTTTGTTAGTGGAATTAGGTTTCTTTAATTTGAAAAGTT
AGATATGCATAAAATATTGAAGTCATAGTTTGTGAACACAGGGGGGTGCGATGGTTCGGTACTATTGGACGCTGCTCCAGCGGATGGGGTAGAGGGTGAAAAGGAGGCTTTCCAAAACGC
GGGTTCTCTTGATGGATTCGAAGTGATCGATGATATCAAAACCGCCCTCGAGAATGTTTGTCCCGGAGTTGTCTCTTGTGCTGATATCCTCGCTATCGCAGCTGAAATCTCTGTTGCACT
GGTAATAACATCATTCTTTAAATTTATGTGCTTTCAGATACCTTTTTTAACCAATGGAAACATAATCATAACCAAATCTCTGTTACCACAGCATTCAAATTGAGAAAAAATATTATGAAA
ACATTATAGTAATATACCGTAAAAATTCATACTCTAATGTTTTTATTTATTTGATATCATTTAAGGCGCGGGAGGGCCGTCATTGGACGTATTGCTAGGAAGGAGAGATGGCCGGACAGC
GATCCGTGCGGACGCAGTGGCTGCACTTCCACTAGGACCTGATTCTCTCGAGATTCTTACTTCCAAATTCTCCGTACATAATCTTGACACTACCGATCTCGTCGCTTTATCTGGTATTGT
ACTTACGCATCTTAATATTTGTTTAGTTTAATTTTGTCATAGGTCATCTTAGAAATATCTTAAGGTACTATGAATCATAATACATATAATGTACGTATTTAGGTGTGCTCATACCTTCGG
GAGGGTTCAGTGTGGAGTGATAAACAATCGTCTACACAACTTTAGTGGTAACAGCGGACAGTCCGACCCAAGTATCGAACCGGAGTTCTTGCAAACGTTACGACGACAATGCCCGCAAGG
CGGAGATCTCACCGCAAGGGCGAATCTTGATCCTACGAGCCCCGACTCATTTGATAACGACTATTTCAAGAACCTTCAAAACAACCGCGGAGTGATTGAATCAGATCAAATCTTGTTCTC
TTCGACAGGAGCGCCTACTGTGTCTTTGGTGAATCGTTTTGCTGAGAACCAAAATGAGTTCTTTACAAATTTTGCGAGATCAATGATCAAGATGGGAAATGTGAGGATTCTCACAGGACG
TGAGGGAGAGATACGTAGAGACTGCAGACGCGTCAATTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATCAACTCCT CTAATAAGCT TCTTCTTTCT ATCCCTCACT TTTACAAACA AAGGGAGACC AAAAATGGGT CTAAGCAAAA CTATTCCCTT AGTGTTACTC CCGATTTTGA TGTTTGGGGT TTTGAGTAAC GCTCAGCTTA CCTCTGATTT TTACTCCACG ACATGCCCTA ACGTCACAGC CATTGCTCGG GGACTGATCG AGCGAGCAAG CCGTAACGAC GTCAGACTCA CTGCTAAAGT CATGCGTCTT CACTTTCATG ACTGTTTCGT GAACGGGTGC GATGGTTCGG TACTATTGGA CGCTGCTCCA GCGGATGGGG TAGAGGGTGA AAAGGAGGCT TTCCAAAACG CGGGTTCTCT TGATGGATTC GAAGTGATCG ATGATATCAA AACCGCCCTC GAGAATGTTT GTCCCGGAGT TGTCTCTTGT GCTGATATCC TCGCTATCGC AGCTGAAATC TCTGTTGCAC TGGCGGGAGG GCCGTCATTG GACGTATTGC TAGGAAGGAG AGATGGCCGG ACAGCGATCC GTGCGGACGC AGTGGCTGCA CTTCCACTAG GACCTGATTC TCTCGAGATT CTTACTTCCA AATTCTCCGT ACATAATCTT GACACTACCG ATCTCGTCGC TTTATCTGGT GCTCATACCT TCGGGAGGGT TCAGTGTGGA GTGATAAACA ATCGTCTACA CAACTTTAGT GGTAACAGCG GACAGTCCGA CCCAAGTATC GAACCGGAGT TCTTGCAAAC GTTACGACGA CAATGCCCGC AAGGCGGAGA TCTCACCGCA AGGGCGAATC TTGATCCTAC GAGCCCCGAC TCATTTGATA ACGACTATTT CAAGAACCTT CAAAACAACC GCGGAGTGAT TGAATCAGAT CAAATCTTGT TCTCTTCGAC AGGAGCGCCT ACTGTGTCTT TGGTGAATCG TTTTGCTGAG AACCAAAATG AGTTCTTTAC AAATTTTGCG AGATCAATGA TCAAGATGGG AAATGTGAGG ATTCTCACAG GACGTGAGGG AGAGATACGT AGAGACTGCA GACGCGTCAA TTAATAAGTT TTGCATGGTT AAATGATCAA ACGTAACTTA TTGTTATTCA TGAAATAAGT GTTCTTTAGT TTGTGCTTCT CCACAATTAA TTGTTTTTCT TCTTTTGATT TTATTTACTG TTAAGCATGC CATTGTTACT TGTAATTGTA
AATCTTATAT AATATTTTTC TTTTTGAAAA AATCCACTAT CATGTCTG

Retrieve as FASTA