RedOxiBase: View Perox 2250

Entry information : AtGPx07 (At4g31870 / ATGPX7 / GPX7)

Entry ID	2250
Creation	2006-06-14 (Marcia Pinheiro Margis)
Last sequence changes	2015-06-03 (Christophe Dunand)
Sequence status	complete
Reviewer	Achraf Jemmat
Last annotation changes	2015-11-05 (Achraf Jemmat)

Peroxidase information: AtGPx07 (At4g31870 / ATGPX7 / GPX7)

Name (synonym)

AtGPx07 (At4g31870 / ATGPX7 / GPX7)

Class

Plant glutathione peroxidase [Orthogroup: Gpx2001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis

Organism

Arabidopsis thaliana [TaxId: 3702 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	AtGPx07 start..stop	S start..stop
AlyGPx07	404	3.25e-145	1..233	1..236
BnGPx01_other	366	2.92e-130	18..233	21..236
BnGPx07_other	363	2.88e-129	4..233	5..232
BoGPx07_other	360	5.2e-128	4..233	5..232

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	15410205..15410450	246	N° 2	15410636..15410712	77	N° 3	15410809..15410870	62	N° 4	15410968..15411086	119
N° 5	15411168..15411335	168	N° 6	15411588..15411617	30
join(15410205..15410450,15410636..15410712,15410809..15410870,15410968..15411086 ,15411168..15411335,15411588..15411617)

Literature and cross-references AtGPx07 (At4g31870 / ATGPX7 / GPX7)

Literature	Glutathione peroxidase genes in Arabidopsis are ubiquitous and regulated by abiotic stresses through diverse signaling pathways (2003). Milla, M. A.,Maurer, A.,Huete, A. R.,Gustafson, J. P. THE PLANT JOURNAL 36:602
Protein ref.	UniProtKB: Q9SZ54
DNA ref.	Phytozome 12: Chr4 (15410205..15411617)
Cluster/Prediction ref.	Phytozome Gene 12: 19648027 UniGene: At.54571
Omic ref.	ePlant: At4g31870 TAIR: At4g31870

Protein sequence: AtGPx07 (At4g31870 / ATGPX7 / GPX7)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	233 (298)
PWM (Da):	25687.18 (32030.6)
PI (pH):	10.08 (9.83)	Peptide Signal:	cut: 25 range:25-322

Sequence 441
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAFSYASFSTPFNGFAANPSPITSAFLGPSLRFSTRTSKTRNPSNGVSVKSSNSHRFLVKSKNFSVYARAAAEKSVHDFTVKDIDGNDVSLDKFKGKPLLIVNVASRCGLTSSNYSELSQLYEKYKNGFEILAFPCNQFGGQEPGSNPEIKQFACTRFKAEFPIFDVDVNGPSTAPIYKFLKSNAGGFLGDIIKWNFEKFLVDKKGKVVERYPPTTSPFQIEKDIQKLLAA*

Retrieve as FASTA

Remarks

complete sequence from genomic (chromo 4, 4 introns), 1 cDNA and 2 ESTs.

Promoter►
Send to BLAST
Send to cis Analysis

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

GAACATGAAT CACCAAAAAG GTTCAGCTAT ATCAGTCTAC AAGCTCTTAA ACCAAGTTTT AAGCCGGAGA AAATACACCA AGAAGACAAA TGTTTCCTTT TTTACCTCCA TGACCATCAT AGACACCCAA GAAGGAAGTG TTATCATCGA GATCAAGTAT TGCAGCATGC TACCAAAGTT ATAAAAAAAA AACATTCTTT GAATCAGTAA GGAAACAAAA TCTGACAAAA AGAAGAAAGG TTTAAACTTT TTGATGATAA TCACTCACAG CATCTTCCAT GGACGCACGC CAACCTTGCA TAGAGGATAA ACCATATCTG AGTTTATGAT TTTCGCCATC TTCTGAGAAC TTGTCTGTTT TTGGAGTACT TAGATATATA CCCATCTCTC TCTGCAACGA AAAAATTAGA CATTTCTTCA TGAATCAAAA AAAGAAACTA TTCTTGATTA CAAAAACAAA ATCAAAAGAG AATTTTGACA ATGGACCCCT GTGATCTTAA TCTTTTAGAG CTAATTAAGA AATCAATCTA CAAACAGAAA CCAAAACAGA GAGGGCTGAA TCGATAAGAG TTTTAAACAT ACCAAGATTT GAAAACGTCA AAAGGAAGTA GGTGATGAAG TTGTACGAGA AGCTTGGTTT CCTCACATAT CTGGCTGGAG AAAGGAAAGA CCTTTGGTAG GAGACAGTTT TGATTAGAGG AAGACGAAGA AGAAGAAAGT TTTGATTTGG GATCAAATTC AGATTGTCGT AGCCCCAAAA AGAAGAAGAA GAGAAAAAGT CTGTTTTGTT TTGCCTTAGA AAAGCAACGA AAGTTCTTAA GATTTTGTTC GTGTTCTCTT ACTTGCCAGC ACAACACACT ATTTTTACTT AACACTAATA CAATAATGTA TTACCTGACT CTTTATGATT TGTTTTAGCT GTATTGCAAT TTTCAACTGT ATTATATGTT TCAAAGTCTT ATGGAGTAAA TTGATATATC AAACACACAT ACATGTCTTG TGTCTTCATT AAATTCTGAA AAGTTAAATA CATAGTAGAT TGTAAGACTA TTTGTGGATG GATATATATA TATATATATA TATATATATA TTTTCTTAAA GATCATAATG TCAAAGTTTC CTAAAATTTC AGTTGTATGA ACGGTAACTT ACTATTTTTC CTCCACACAA GGGTCCAAGG AGACATGTGC AAGTAATAAA TGCAACACAC ATAGGAAGAC ACACGGCTAC CATCTTCCAC CATGGCAACA ATGCGATATT TGGCAAGATT TGACGGACTC CATACATTAC TCTACTACCA AATCAAAAGT ATTGGTCTCA AGTACACCTA AATCACTTTG CAATTAGCCA GACCACTGTT TCACAACTAA ACACGTCTTC ACCCAAAAAA TCGGTCTACA AACTTGGGAC AGGTAAACTT TAGTAAAACA TTCATGAAAA TAGTGAGTAT ACTTGGATCC ATATCTCAGG TCTAATCCAA ACACTCTTTG TGAGTCTATG ACAAGGGTAT ATATAACCTC ATTTTGGAGT CCCTAATAGC ATAATCTCCT TCCAGATTGA TTCATCCACC TCTTTTTAGA CGTGATGATT TACTCCGTGT TATCGTATTA TCAATCATTT AGATTACTAC TACCAAAGAG GGCTCGAGAA ATAATATCGT ATAGTTGCAA CTTTGTTGCA TGATAAGCTT TGACTAGTCT TCATCAAATC CATAGCTTTT GCACCGCTCA GCTTTTCCGT ACAGCATTTT TGTCAAATGC CATTTTTACT TCTTTTCAAA ATTAGTGAAT ATAATATGGA AAACGTGTTC TCCCTGTGAC CTATGGACCT TTTATGGGTG TAATATTTGT GGATATGGAA TTTAAAATTT CTTAATGAAG CTGCTATTTA GCGTTAATTT TTAAGTAGCT CTCCCTTTTC
CTTAGAACGT GTAACACTTT TGTATATGTA GATAATAGTA GAACGAAAAA AAACTCTTTG TAGAGAGATT CTGCTTCTAT

Retrieve as FASTA

Terminator +►
Send to BLAST
Send to cis Analysis

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATTTAGTGTT GGCATATGTG GTACACAAAT TTCCAGGTTA TTGTTGGTAT ACCAGAATTC TTTCTGTAAC GTAAATAAAA TTATACAATC GCATGATTTG TTCAATAACC ATTCCATATA AACATCAAGC AGTGCCTTTA GGCTTATTCA TAAACATCCA ATTATTAGAA TATTTACAAC ACACACAAAC ATATTCAATT CGTGGATAAA TTTAAAATGA GAGTGCTTAA TTATAAGACT AACGTTGGCG TCGAGAAGAA GAAGACTGTT TCCTTGACTG TGGGAGAAAT CTATGGCGGA GATAAATCGG TCTAGATACT TGTGATGATC TACGAGATAC TCGAGGAGGA GGATCTCGTA TCTTTCGAGT CTTAATAAGA GGTGTCCGTG GCTCTTCACA AACTTCTCCG AGAAGAAGAT CTTCGGGGTC GAGGAAAACT GAGTATACGG GCCAGTCGAA GGAATTTTCG ATCGGTTCAA AGACCGGCCA GACGAAGGAA TTAAAGGCAG TTGCGAGCTC CCGTCTCCTG TTAAGCAAAT CTTCGTCAAA ATCCAATATC AGGCGTCGAT AACTCACTGC TGTGTCGATG GTCGATGTCT CTATGAGTTT GTATTTCTCT AACCTGCAGG CAAGACTCTC GCTCGTCTCC TCCATGTCTT CTTTCAGATA TCAATCTGCA AAAGTTCTTT GTAAGACTTT ATATACACTA TTAAGGTCTT TATTATTGTT TTAAAGAATA AATTATTGTA TTTTACCTTC ATAATTGTCA CCATTATCTC AAGATTTAAA AATTACAAAG ACTCGTCAAT GAAATTACTC GGAACAAGTT AAGCTAATTT TTTTGTTAAA ATGTGTTGGC AAACCAAAAA CTAGAACTTT CACAGAACAG CGCAACATTA CACCCGAATT CAAAGGATTA TTATAGACAA CTTGCGATTT TTTCCCCCTA ATTTGCTAGT
ATTAAACAAG TGCAACCACT ATAATATGTC CCTAATGATA

Retrieve as FASTA

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTTTCTCTTACGCATCATTCTCTACACCCTTCAATGGTTTCGCTGCAAATCCGTCTCCGATTACTTCCGCTTTTCTCGGCCCATCATTGAGATTCTCCACCAGAACATCAAAAACT
CGGAATCCGAGTAATGGGGTTTCAGTGAAATCGTCAAATAGTCATAGGTTTCTAGTCAAATCTAAAAATTTCAGTGTCTATGCAAGGGCTGCAGCAGAGAAGTCTGTTCACGATTTCACT
GTAAAGGTATGTTTCTTTTAATTTATCTGAAGAAGAAAATTAGGTTTTTGTTTCTTCGTTATCGAAATTGAAGAATTTGTTCTGTCGTCAAAATATGATTTTTCTCAACCTCACTGAATT
ATGTAGTACATGTGAGAGCTTCCTAATTAAAACCTAGACTTTGGAGACATAATTGTGTTTTTTTGAAACAGGACATCGATGGTAATGATGTTTCTCTGGACAAATTCAAAGGAAAACCTT
TGTTGATCGTTAACGTTGCGTCAAGATGGTGATTGTTTTTATTGTTTCTTCGAATTCTTTCTATTTGATAAGTTTTTGCATCTGAATTTTTTTTTAAGTTTATTTTTTAACTTCACGGTG
TCAGTGGTTTGACATCATCAAATTACTCAGAGCTTTCTCAACTGTACGAAAAATACAAGAACCAAGGTGTGCTTGTTATAGTAAGCTTTTTACACATCTAAATTTAATTAAGGTAACACA
GTGATTGTGAGATTCTTATTTATTGTGTCTCTCTCGTTTTTAGGATTTGAGATTCTTGCTTTCCCTTGCAATCAATTTGGAGGTCAAGAACCCGGTTCAAACCCTGAGATCAAGCAATTT
GCTTGCACCCGGTTCAAAGCAGAGTTCCCTATATTCGACAAGGTATATAGAAAAAAAGAACTCTCGTTTTTTTGAGTTTAGGGAGATATCTTTTAATTAGTTTTGATAAGTTATGTTCTT
CAGGTTGATGTGAATGGACCAAGCACAGCTCCAATCTACAAGTTCTTGAAATCCAATGCTGGTGGTTTCCTTGGTGATATCATCAAATGGAACTTTGAGAAATTCTTGGTTGATAAAAAG
GGCAAAGTTGTCGAGAGATACCCTCCCACAACTTCTCCTTTCCAAATCGAGGTACCAAATTCAAAACTCTAATTCAATCTGGATAACTGGATCCATGGTTCATGTCGTGAACCAAACCAC
CAGTTGAACTTTTCTAATGTAAATAGAGAATCTATCAATTTTACGTTTTAACATTCCTAACATATGTAAAATATGGATTTAAATTTGATACCAAATAAGTTTACTAACATTATTTTTCCA
TGTGACACGGCGGAATGTTGAGTGGTCCTATAATTTAATACTAACAATATGTTTGTTTGGCAGAAGGACATCCAGAAGTTGCTTGCGGCTTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA