Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
233 |
PWM (Da): |
25687.18 |
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PI (pH):
| 10.08 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MAFSYASFSTPFNGFAANPSPITSAFLGPSLRFSTRTSKTRNPSNGVSVKSSNSHRFLVKSKNFSVYARAAAEKSVHDFTVKDIDGNDVSLDKFKGKPLLIVNVASRCGLTSSNYSELSQLYEKYKNGFEILAFPCNQFGGQEPGSNPEIKQFACTRFKAEFPIFDVDVNGPSTAPIYKFLKSNAGGFLGDIIKWNFEKFLVDKKGKVVERYPPTTSPFQIEKDIQKLLAA* |
Retrieve as FASTA
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Remarks |
complete sequence from genomic (chromo 4, 4 introns), 1 cDNA and 2 ESTs. |
Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATTTAGTGTT GGCATATGTG GTACACAAAT TTCCAGGTTA TTGTTGGTAT ACCAGAATTC TTTCTGTAAC GTAAATAAAA TTATACAATC GCATGATTTG TTCAATAACC ATTCCATATA
AACATCAAGC AGTGCCTTTA GGCTTATTCA TAAACATCCA ATTATTAGAA TATTTACAAC ACACACAAAC ATATTCAATT CGTGGATAAA TTTAAAATGA GAGTGCTTAA TTATAAGACT
AACGTTGGCG TCGAGAAGAA GAAGACTGTT TCCTTGACTG TGGGAGAAAT CTATGGCGGA GATAAATCGG TCTAGATACT TGTGATGATC TACGAGATAC TCGAGGAGGA GGATCTCGTA
TCTTTCGAGT CTTAATAAGA GGTGTCCGTG GCTCTTCACA AACTTCTCCG AGAAGAAGAT CTTCGGGGTC GAGGAAAACT GAGTATACGG GCCAGTCGAA GGAATTTTCG ATCGGTTCAA
AGACCGGCCA GACGAAGGAA TTAAAGGCAG TTGCGAGCTC CCGTCTCCTG TTAAGCAAAT CTTCGTCAAA ATCCAATATC AGGCGTCGAT AACTCACTGC TGTGTCGATG GTCGATGTCT
CTATGAGTTT GTATTTCTCT AACCTGCAGG CAAGACTCTC GCTCGTCTCC TCCATGTCTT CTTTCAGATA TCAATCTGCA AAAGTTCTTT GTAAGACTTT ATATACACTA TTAAGGTCTT
TATTATTGTT TTAAAGAATA AATTATTGTA TTTTACCTTC ATAATTGTCA CCATTATCTC AAGATTTAAA AATTACAAAG ACTCGTCAAT GAAATTACTC GGAACAAGTT AAGCTAATTT
TTTTGTTAAA ATGTGTTGGC AAACCAAAAA CTAGAACTTT CACAGAACAG CGCAACATTA CACCCGAATT CAAAGGATTA TTATAGACAA CTTGCGATTT TTTCCCCCTA ATTTGCTAGT
ATTAAACAAG TGCAACCACT ATAATATGTC CCTAATGATA
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Retrieve as FASTA
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DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCTTTCTCTTACGCATCATTCTCTACACCCTTCAATGGTTTCGCTGCAAATCCGTCTCCGATTACTTCCGCTTTTCTCGGCCCATCATTGAGATTCTCCACCAGAACATCAAAAACT CGGAATCCGAGTAATGGGGTTTCAGTGAAATCGTCAAATAGTCATAGGTTTCTAGTCAAATCTAAAAATTTCAGTGTCTATGCAAGGGCTGCAGCAGAGAAGTCTGTTCACGATTTCACT GTAAAGGTATGTTTCTTTTAATTTATCTGAAGAAGAAAATTAGGTTTTTGTTTCTTCGTTATCGAAATTGAAGAATTTGTTCTGTCGTCAAAATATGATTTTTCTCAACCTCACTGAATT ATGTAGTACATGTGAGAGCTTCCTAATTAAAACCTAGACTTTGGAGACATAATTGTGTTTTTTTGAAACAGGACATCGATGGTAATGATGTTTCTCTGGACAAATTCAAAGGAAAACCTT TGTTGATCGTTAACGTTGCGTCAAGATGGTGATTGTTTTTATTGTTTCTTCGAATTCTTTCTATTTGATAAGTTTTTGCATCTGAATTTTTTTTTAAGTTTATTTTTTAACTTCACGGTG TCAGTGGTTTGACATCATCAAATTACTCAGAGCTTTCTCAACTGTACGAAAAATACAAGAACCAAGGTGTGCTTGTTATAGTAAGCTTTTTACACATCTAAATTTAATTAAGGTAACACA GTGATTGTGAGATTCTTATTTATTGTGTCTCTCTCGTTTTTAGGATTTGAGATTCTTGCTTTCCCTTGCAATCAATTTGGAGGTCAAGAACCCGGTTCAAACCCTGAGATCAAGCAATTT GCTTGCACCCGGTTCAAAGCAGAGTTCCCTATATTCGACAAGGTATATAGAAAAAAAGAACTCTCGTTTTTTTGAGTTTAGGGAGATATCTTTTAATTAGTTTTGATAAGTTATGTTCTT CAGGTTGATGTGAATGGACCAAGCACAGCTCCAATCTACAAGTTCTTGAAATCCAATGCTGGTGGTTTCCTTGGTGATATCATCAAATGGAACTTTGAGAAATTCTTGGTTGATAAAAAG GGCAAAGTTGTCGAGAGATACCCTCCCACAACTTCTCCTTTCCAAATCGAGGTACCAAATTCAAAACTCTAATTCAATCTGGATAACTGGATCCATGGTTCATGTCGTGAACCAAACCAC CAGTTGAACTTTTCTAATGTAAATAGAGAATCTATCAATTTTACGTTTTAACATTCCTAACATATGTAAAATATGGATTTAAATTTGATACCAAATAAGTTTACTAACATTATTTTTCCA TGTGACACGGCGGAATGTTGAGTGGTCCTATAATTTAATACTAACAATATGTTTGTTTGGCAGAAGGACATCCAGAAGTTGCTTGCGGCTTAA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCTTTCTCTTACGCATCATTCTCTACACCCTTCAATGGTTTCGCTGCAAATCCGTCTCCGATTACTTCCGCTTTTCTCGGCCCATCATTGAGATTCTCCACCAGAACATCAAAAACT CGGAATCCGAGTAATGGGGTTTCAGTGAAATCGTCAAATAGTCATAGGTTTCTAGTCAAATCTAAAAATTTCAGTGTCTATGCAAGGGCTGCAGCAGAGAAGTCTGTTCACGATTTCACT GTAAAGGACATCGATGGTAATGATGTTTCTCTGGACAAATTCAAAGGAAAACCTTTGTTGATCGTTAACGTTGCGTCAAGATGTGGTTTGACATCATCAAATTACTCAGAGCTTTCTCAA CTGTACGAAAAATACAAGAACCAAGGATTTGAGATTCTTGCTTTCCCTTGCAATCAATTTGGAGGTCAAGAACCCGGTTCAAACCCTGAGATCAAGCAATTTGCTTGCACCCGGTTCAAA GCAGAGTTCCCTATATTCGACAAGGTTGATGTGAATGGACCAAGCACAGCTCCAATCTACAAGTTCTTGAAATCCAATGCTGGTGGTTTCCTTGGTGATATCATCAAATGGAACTTTGAG AAATTCTTGGTTGATAAAAAGGGCAAAGTTGTCGAGAGATACCCTCCCACAACTTCTCCTTTCCAAATCGAGAAGGACATCCAGAAGTTGCTTGCGGCTTAA |
Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCTTTCT CTTACGCATC ATTCTCTACA CCCTTCAATG GTTTCGCTGC AAATCCGTCT CCGATTACTT CCGCTTTTCT CGGCCCATCA TTGAGATTCT CCACCAGAAC ATCAAAAACT
CGGAATCCGA GTAATGGGGT TTCAGTGAAA TCGTCAAATA GTCATAGGTT TCTAGTCAAA TCTAAAAATT TCAGTGTCTA TGCAAGGGCT GCAGCAGAGA AGTCTGTTCA CGATTTCACT
GTAAAGGACA TCGATGGTAA TGATGTTTCT CTGGACAAAT TCAAAGGAAA ACCTTTGTTG ATCGTTAACG TTGCGTCAAG ATGTGGTTTG ACATCATCAA ATTACTCAGA GCTTTCTCAA
CTGTACGAAA AATACAAGAA CCAAGGATTT GAGATTCTTG CTTTCCCTTG CAATCAATTT GGAGGTCAAG AACCCGGTTC AAACCCTGAG ATCAAGCAAT TTGCTTGCAC CCGGTTCAAA
GCAGAGTTCC CTATATTCGA CAAGGTTGAT GTGAATGGAC CAAGCACAGC TCCAATCTAC AAGTTCTTGA AATCCAATGC TGGTGGTTTC CTTGGTGATA TCATCAAATG GAACTTTGAG
AAATTCTTGG TTGATAAAAA GGGCAAAGTT GTCGAGAGAT ACCCTCCCAC AACTTCTCCT TTCCAAATCG AGAAGGACAT CCAGAAGTTG CTTGCGGCTT AA
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Retrieve as FASTA
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