Entry information : PdPrx01
Entry ID 2256
Creation 2005-09-23 (Christophe Dunand)
Last sequence changes 2016-01-07 (Achraf Jemmat)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2016-01-07 (Christophe Dunand)
Peroxidase information: PdPrx01
Name PdPrx01
Class Class III peroxidase     [Orthogroup: Prx017]*
Taxonomy Eukaryota Viridiplantae Streptophyta Rosaceae Prunus
Organism Prunus dulcis (almond)    [TaxId: 3755 ]
Cellular localisation N/D
Tissue type Embryos
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PdPrx01
start..stop
S start..stop
PpePrx24 348 8e-123 1..175 1..175
CsPrx63 262 9e-91 1..175 1..174
CclPrx86 261 2e-90 1..175 1..174
CclPrx116 261 2e-88 1..175 1..174
Literature and cross-references PdPrx01
Literature Dandekar,A et al., Development of a Functional Genomics Database for Peach
Unpublished (2002)
EST ref. GenBank:   BU575219.1 [5' end]
Protein sequence: PdPrx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   175 (154)
PWM (Da):   %s   18374.12 (16263.0)  
PI (pH):   %s   4.44 (4.60) Peptide Signal:   %s   cut: 22 range:22-175
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MALVLAMALA MVLAVAQEVE GQLMVGFYGE TCPQAEPIVR NVVREAILSD TNMAPVLLRL HFHDCFVEGC DGSILIENGP SGERHAFGHQ GVGGFEVIEK AKAELEAACQ GVVSCADIVA 
LAARDAIAMA GGPAYEVPTG RRDGVVSNMS LANDMPDVTN SIQQLKVNFM RTGLT 

Retrieve as FASTA  
Remarks Partial seqiuence from 1 EST. START codon predicted by the PeroxiBase team with FGeneSH and GenScan. Cultivar "Nonpareil".
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCCTTGG TTTTGGCTAT GGCTTTGGCC ATGGTTTTGG CTGTGGCGCA GGAGGTTGAG GGGCAGCTTA TGGTAGGTTT CTATGGTGAA ACATGCCCCC AAGCCGAGCC CATTGTTCGC  AACGTCGTTA GAGAAGCTAT TCTCTCCGAT ACCAACATGG CACCAGTCTT GCTCAGGCTC CATTTTCACG ACTGCTTCGT TGAGGGTTGT GATGGGTCAA TTCTGATTGA GAATGGACCA  AGCGGTGAGA GGCATGCATT TGGTCACCAA GGCGTTGGGG GATTTGAAGT GATAGAGAAA GCCAAGGCAG AGTTGGAGGC TGCATGCCAA GGCGTGGTTT CTTGTGCAGA TATTGTGGCC  TTGGCAGCTA GAGATGCTAT AGCCATGGCT GGTGGACCGG CGTACGAGGT GCCTACCGGC CGGAGAGATG GGGTTGTnTC AAATATGTCT CTGGCAAATG ACATGCCGGA TGTTACTAAT 
TCAATCCAAC AGCTCAAGGT TAATTTCATG CGCACAGGCC TTACA 

Retrieve as FASTA