Entry information : PsiPrx01
Entry ID 2266
Creation 2006-09-15 (Christophe Dunand)
Last sequence changes 2006-09-15 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-12-21 (Christophe Dunand)
Peroxidase information: PsiPrx01
Name PsiPrx01
Class Class III peroxidase    [Orthogroup: Prx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Picea
Organism Picea sitchensis (Sitka spruce)    [TaxId: 3332 ]
Cellular localisation N/D
Tissue type Barks
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PsiPrx01
start..stop
S start..stop
PtaPrx01 683 0 1..342 1..342
PabPrx47 659 0 1..342 1..342
PpPrx01 654 0 1..342 1..342
CruPrx01 561 0 30..337 19..325
Literature and cross-references PsiPrx01
Literature Ralph,S., Kolosova,N., Oddy,C., Cooper,D., Butterfield,Y., Kirkpatrick,R., Liu,J., Palmquist,D., Stott,J., Barber,S., Yang,G., Babakaiff,R., Brown-John,M., Chand,S., Featherstone,R., Masson,A., Mayo,M., Moran,J., Olson,T., Wong,D., Friedmann,M.F., Ritland,C.E., Siddiqui,A., Holt,R., Jones,S., Marra,M., Ellis,B.E., Douglas,C., Ritland,K. and Bohlmann,J.
The spruce transcriptome: Analysis of expressed sequence tags from multiple cDNA libraries
Unpublished (2005)
Protein ref. GenBank:   ABK22252.1
mRNA ref. GenBank:   EF082901
Cluster/Prediction ref. UniGene:   Psi.725
Protein sequence: PsiPrx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   342 (322)
PWM (Da):   %s   38364.57 (36214.4)  
PI (pH):   %s   9.24 (9.10) Peptide Signal:   %s   cut: 21 range:21-342
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGRWVLLALA LSAQLLQSQA YNVGSSSNTN GSYGENGLVM NYYGDSCPQA EEIIAEQVRL LYKRHKNTAF SWLRNIFHDC AVESCDASLL LDSTRKSISE KETDRSFGLR NFRYLDTIKE  AVERECPGVV SCADILVLSA RDGVVSLGGP YTPLKTGRRD GRKSRADVVE NYLPDHNESI STVLSRFKAM GIDTRGVVAL LGAHSVGRTH CVKLVHRLYP EVDPTLDPGH VEHMKHKCPD 
AIPNPKAVQY VRNDRGTPMK LDNNYYVNLM NNKGLLIVDQ QLYADSRTRP YVKKMAKSQD YFFKYFARAL TILSENNPLT GNRGEIRRQC SLRNKLHTIS KR 

Retrieve as FASTA  
Remarks Complete sequence from 20 ESTs and 1 mRNA. Cultivar "FB3-425".
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGTCGGT GGGTATTGCT GGCTTTGGCG CTCAGCGCGC AGCTGTTGCA GTCTCAGGCT TACAATGTAG GAAGTTCAAG TAATACTAAT GGGAGTTACG GTGAGAATGG ACTGGTGATG  AATTACTATG GGGACTCTTG CCCTCAGGCA GAAGAGATCA TTGCTGAACA AGTCCGCTTG CTGTACAAAA GACACAAGAA CACTGCATTC TCGTGGCTTA GAAACATTTT CCATGACTGT  GCAGTGGAGT CATGTGACGC ATCTCTTCTG TTGGACTCGA CGAGGAAGAG CATATCGGAG AAGGAGACAG ACAGGAGCTT CGGCCTTCGC AACTTCAGGT ATTTGGATAC CATCAAAGAA  GCCGTGGAGA GGGAGTGCCC CGGGGTCGTC TCCTGCGCAG ATATACTCGT TCTCTCTGCC AGAGATGGCG TTGTATCGTT GGGAGGGCCA TACACTCCCC TGAAGACGGG ACGAAGAGAT  GGACGGAAGA GCAGAGCCGA TGTGGTGGAG AATTACCTGC CCGATCACAA TGAGAGTATC TCCACCGTGC TGTCTCGCTT CAAAGCCATG GGAATCGACA CCCGTGGGGT TGTTGCATTG  CTGGGGGCTC ACAGTGTGGG AAGGACTCAC TGCGTGAAGC TGGTGCACAG GCTGTACCCG GAAGTAGATC CGACACTGGA CCCTGGGCAC GTTGAGCACA TGAAGCATAA GTGTCCGGAC  GCGATCCCGA ACCCGAAGGC GGTGCAGTAT GTGCGGAACG ACCGGGGAAC GCCAATGAAG CTGGACAACA ACTATTACGT GAACCTGATG AACAACAAGG GGCTCCTCAT AGTGGACCAG  CAGCTGTATG CAGATTCGAG GACGAGGCCA TACGTGAAGA AGATGGCAAA GAGCCAGGAC TACTTCTTCA AATACTTCGC CAGGGCGCTC ACCATTCTCT CTGAGAACAA TCCTCTCACC 
GGCAATCGAG GAGAAATCCG CCGCCAATGC TCTCTCAGAA ACAAACTGCA CACAATCAGC AAGCGTTGA 

Retrieve as FASTA