Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
328 (301) |
PWM (Da): |
35983.24 (32977.6) |
Transmb domain: |
i13-35o |
PI (pH): |
8.15 (8.21) |
Peptide Signal: |
cut: 28 range:28-328 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAEQSQLKNL TIILLLLCLS FQSLSFAAES HLTVDFYSKS CPKFLDIIRE TITNKQISTP TTAAAALRLF FHDCFPNGCD ASVLVSSTAF NTAERDSSIN LSLPGDGFDV VIRAKTALEL
ACPNTVSCSD IIAVAVRDLL VTVGGPYYEI SLGRRDSRTS KSSLVSDLLP LPSMQISKLI DQFSSRGFSV QEMVALSGAH TIGFSHCKEF TNRVNPNNST GYNPRFAVAL KKACSNSKND
PTISVFNDVM TPNKFDNMYF QNIPKGLGLL ESDHGLFSDP RTRPFVELYA RDQSRFFNDF AGAMQKLSLH GVLTGRRGEI RRRCDAIN
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (chromo 5, no intron), 3 cDNA and 27 ESTs from siliques and flowers only. |
Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AACGTCTTAG AGATTCTTCT TAATTGTTAT TACGATTTGT GAGATTTCGT TTTTGTTTAT TTTTTTAATT GTTGATTAGT TAGTTTAGAG CAAATGTTTG AGATTTCGGC GAGATTGAAT
TGTTGATCTA AGGCTCATGT GTGATTATTT ATATATGATT ATAATTAGTC GATTCGTCTT CCGATAACTG AGGATTACTG AATTTGATCA AATAGAATAA TCTTATTTTC TGGTTGCTAA
ATTTTCTTTT CTTTTCACTT ACTATTATAA TATATCAAAA TTTTATTCTG AAATATATAA CATATAGTAT AATTTAAAAA AAAATAACCT ATAATATAGG ATGAGTTATG ATCGAGTGTA
ATGCAAATAA TTGAAGAAAT CAAATTAAAA TTGAAAATTC ATTTAAATTT TGTAAACGGA AGAATCAATT CCCATATCTT AAGGAATTAA AAGTCCTCCA TTAGTTTTCT TTTCAATCTT
TTTCATTGTT CGTTTTCTAA ATTTTATAAA AGCAAAAAGA TAATACGAAG AAAAAGGATG GAATTAACAA AAAGAAAAGC CACCCAAATT GCCAAATAAT TCAAGAATCC ACCCAACCAT
AAAAATTCAC AAAAAAAAAA AAAAAAAACT CATCTCCAAC TAATTACAAT CCCCTACTCT ATTATTTAGA AATTTAAAAA GAAAAAAAGA AAAAGTCGCA AAACCCACAA TTAAAACTAA
AACAAAAGTA ACGAGTTAAA AAATGACACG TCAAAACTCG GCCGAGTTAA CACAAGATTT CTCACCACCG AGTCGACACC GGCTCCGACT AACATCACCG GAATTAAGCA ACTCCTCCCA
ATCAATCTCC TCATTCTCCA CCAAATCATC ATCTTCAATT TTAGCTCTCA ACACTTCCAA AACTCTTCTC GCCTTCTGCT TAGCTCTTTC TCTCCCACTC CTCTCCACTT TCACCAACTC
CTCCACCGCA TTCGCCGCCA TAGCCAACCC TTTAAACCTC
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Retrieve as FASTA
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DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCGGAAC AATCTCAACT CAAGAATCTC ACCATCATCC TCCTCCTCCT CTGCTTATCC TTCCAATCAC TATCCTTCGC CGCCGAATCT CACCTAACCG TCGATTTCTA CTCCAAATCA
TGCCCTAAAT TCCTCGACAT TATCCGCGAA ACCATCACCA ACAAACAGAT CTCAACTCCA ACAACCGCCG CCGCAGCTCT CCGCCTCTTC TTCCACGACT GTTTCCCCAA CGGCTGCGAC
GCCTCCGTCC TCGTTTCTTC CACCGCTTTC AACACCGCCG AACGCGATTC ATCAATCAAT CTCTCTCTCC CCGGAGACGG ATTCGACGTA GTAATCCGAG CTAAAACAGC TCTCGAACTC
GCTTGTCCCA ACACAGTCTC TTGCTCCGAT ATCATCGCCG TCGCGGTACG TGATCTCCTC GTAACCGTCG GTGGACCTTA CTACGAAATC TCCCTCGGCC GTCGCGATTC ACGAACTTCG
AAATCATCTC TCGTCTCCGA TCTCCTCCCG CTCCCGTCGA TGCAGATATC GAAGCTCATC GATCAATTCA GCTCCAGAGG CTTCTCCGTT CAAGAAATGG TTGCTTTGAG TGGTGCTCAC
ACCATCGGAT TCTCACATTG CAAGGAGTTC ACGAACCGGG TCAACCCGAA TAATAGTACC GGGTATAACC CGAGATTCGC GGTAGCTTTA AAGAAAGCTT GTTCGAATTC CAAAAATGAC
CCTACGATAT CTGTCTTCAA CGACGTTATG ACTCCGAACA AATTCGATAA TATGTATTTC CAGAATATTC CGAAAGGTCT CGGGTTACTT GAATCGGATC ACGGTTTATT CTCCGACCCG
AGAACCCGTC CGTTCGTTGA GTTATACGCG AGAGACCAAT CTCGGTTCTT TAACGACTTT GCCGGAGCTA TGCAGAAGTT GAGTCTTCAC GGTGTTTTGA CCGGACGGCG AGGAGAGATC
CGACGAAGGT GTGATGCGAT CAACTAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCGGAAC AATCTCAACT CAAGAATCTC ACCATCATCC TCCTCCTCCT CTGCTTATCC TTCCAATCAC TATCCTTCGC CGCCGAATCT CACCTAACCG TCGATTTCTA CTCCAAATCA
TGCCCTAAAT TCCTCGACAT TATCCGCGAA ACCATCACCA ACAAACAGAT CTCAACTCCA ACAACCGCCG CCGCAGCTCT CCGCCTCTTC TTCCACGACT GTTTCCCCAA CGGCTGCGAC
GCCTCCGTCC TCGTTTCTTC CACCGCTTTC AACACCGCCG AACGCGATTC ATCAATCAAT CTCTCTCTCC CCGGAGACGG ATTCGACGTA GTAATCCGAG CTAAAACAGC TCTCGAACTC
GCTTGTCCCA ACACAGTCTC TTGCTCCGAT ATCATCGCCG TCGCGGTACG TGATCTCCTC GTAACCGTCG GTGGACCTTA CTACGAAATC TCCCTCGGCC GTCGCGATTC ACGAACTTCG
AAATCATCTC TCGTCTCCGA TCTCCTCCCG CTCCCGTCGA TGCAGATATC GAAGCTCATC GATCAATTCA GCTCCAGAGG CTTCTCCGTT CAAGAAATGG TTGCTTTGAG TGGTGCTCAC
ACCATCGGAT TCTCACATTG CAAGGAGTTC ACGAACCGGG TCAACCCGAA TAATAGTACC GGGTATAACC CGAGATTCGC GGTAGCTTTA AAGAAAGCTT GTTCGAATTC CAAAAATGAC
CCTACGATAT CTGTCTTCAA CGACGTTATG ACTCCGAACA AATTCGATAA TATGTATTTC CAGAATATTC CGAAAGGTCT CGGGTTACTT GAATCGGATC ACGGTTTATT CTCCGACCCG
AGAACCCGTC CGTTCGTTGA GTTATACGCG AGAGACCAAT CTCGGTTCTT TAACGACTTT GCCGGAGCTA TGCAGAAGTT GAGTCTTCAC GGTGTTTTGA CCGGACGGCG AGGAGAGATC
CGACGAAGGT GTGATGCGAT CAACTAA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AGAATTAAAT AAAATTATAT ATCGGTTTAA ACCGTAGATA CCATACTAGA TAACAACTAT TTTTGCCAAA CCTCTAATTC GAACCGAAAA CCAAACACAA TCAACCGGTT TAAGAGAATA
AACGTAATAA ACCGGCTCAT ATAAGAAAAT AACTGGATCC TCTATCCCGT GATTGGTGGT TGCACTAAAC CAAAGCGCGT TTTCTTCACT CTCTCACTCT CACTCTCTCT TCTACTTCCA
TTAAAATCTC ACCGCCTCTT TCACTCTCAC TCTCTCAAGC TCAAGAGTTC TGAATCTCCC TTCAACAATG GCGGAACAAT CTCAACTCAA GAATCTCACC ATCATCCTCC TCCTCCTCTG
CTTATCCTTC CAATCACTAT CCTTCGCCGC CGAATCTCAC CTAACCGTCG ATTTCTACTC CAAATCATGC CCTAAATTCC TCGACATTAT CCGCGAAACC ATCACCAACA AACAGATCTC
AACTCCAACA ACCGCCGCCG CAGCTCTCCG CCTCTTCTTC CACGACTGTT TCCCCAACGG CTGCGACGCC TCCGTCCTCG TTTCTTCCAC CGCTTTCAAC ACCGCCGAAC GCGATTCATC
AATCAATCTC TCTCTCCCCG GAGACGGATT CGACGTAGTA ATCCGAGCTA AAACAGCTCT CGAACTCGCT TGTCCCAACA CAGTCTCTTG CTCCGATATC ATCGCCGTCG CGGTACGTGA
TCTCCTCGTA ACCGTCGGTG GACCTTACTA CGAAATCTCC CTCGGCCGTC GCGATTCACG AACTTCGAAA TCATCTCTCG TCTCCGATCT CCTCCCGCTC CCGTCGATGC AGATATCGAA
GCTCATCGAT CAATTCAGCT CCAGAGGCTT CTCCGTTCAA GAAATGGTTG CTTTGAGTGG TGCTCACACC ATCGGATTCT CACATTGCAA GGAGTTCACG AACCGGGTCA ACCCGAATAA
TAGTACCGGG TATAACCCGA GATTCGCGGT AGCTTTAAAG AAAGCTTGTT CGAATTCCAA AAATGACCCT ACGATATCTG TCTTCAACGA CGTTATGACT CCGAACAAAT TCGATAATAT
GTATTTCCAG AATATTCCGA AAGGTCTCGG GTTACTTGAA TCGGATCACG GTTTATTCTC CGACCCGAGA ACCCGTCCGT TCGTTGAGTT ATACGCGAGA GACCAATCTC GGTTCTTTAA
CGACTTTGCC GGAGCTATGC AGAAGTTGAG TCTTCACGGT GTTTTGACCG GACGGCGAGG AGAGATCCGA CGAAGGTGTG ATGCGATCAA CTAAAACGTC TTAGAGATTC TTCTTAATTG
TTATTACGAT TTGTGAGATT TCGTTTTTGT TTATTTTTTT AATTGTTGAT TAGTTAGTTT AGAGCAAATG TTTGAGATTT CGGCGAGATT GAATTGTTGA TCTAAGGCTC ATGTGTGATT
ATTTATATAT GATTATAATT AGTCGATTCG TCTTCCGATA ACTGAGGATT ACTGAATTTG ATCAAATAGA ATAATCTTAT TTTCTGGTTG CTAAA
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Retrieve as FASTA
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