Entry information : UmCcP02
Entry ID 2328
Creation 2006-08-29 (Nenad Bakalovic)
Last sequence changes 2006-08-29 (Nenad Bakalovic)
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2012-04-03 (Catherine Mathe (Scipio))
Peroxidase information: UmCcP02
Name UmCcP02
Class Cytochrome C peroxidase    [Orthogroup: CcP001]
Taxonomy Eukaryota Fungi Basidiomycota Ustilaginomycetes Ustilaginaceae Ustilago
Organism Ustilago maydis    [TaxId: 5270 ]
Cellular localisation N/D
Tissue types Buds
Mycelium
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value UmCcP02
start..stop
S start..stop
SreCcP02 697 0 1..397 1..395
UhorCcP02 684 0 1..397 1..398
ScomCcP 434 3e-152 9..373 7..361
CgraCcP01 431 3e-151 14..369 1..344
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 98562..99758 1197  
complement(join(98562..99758))


exon

Literature and cross-references UmCcP02
Literature REFERENCE 1 Birren,B et al , The genome sequence of Ustilago maydis. unpublished.
REFERENCE 2 Garcia-Pedrajas,M.D. and Gold,S.E. Fungal Dimorphism Regulated Gene Expression in Ustilago Maydis: II Bud Upregulated Genes.
Protein ref. UniProtKB:   Q4PBY6
DNA ref. JGI genome:   contig_1_83 (99758..98562)
mRNA ref. GenBank:   XM_753431
EST ref. GenBank:   CF643872 [5' end]   CF541432 [3' end]   EH026422 [Fragment]
Protein sequence: UmCcP02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   398
PWM (Da):   %s   43021.25  
PI (pH):   %s   8.58
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASLRTGLRV AQPLRASARN FATRPSIRSS VRHYSSPAPG SPPPPQPSSS SSTSKVLLTS VAIAAAAGGA FLAFGRDDKV SILGVGANGA NKFQGSKGSV GPATTSAHSK ADYQAVYNAI  AEQLEANPDY DDGSYGPVLV RLAWHASGTY DKNSNTGGSN GATMRFAPES EHGANAGLGA ARDFMEKIHQ KFPWITYSDL WTLGGVAAIQ ELGGPKIPWR PGRKDATADK CTPDGRLPDG  DKGPDHLRYI FYKMGFNDQE IVALSGAHAL GRCHTDRSGF DGPWTFAPTS FTNEYFNLLM NEKWNIRKWN GPPQFEDKST KSLMMLMTDM ALVQDPSFKK HVQRYAKSED EFFNDFRSAY 
AKLLELGVPA ENFKAFETKL DGGKPFEFAT SAEQENAN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 5, no intron) and 25 ESTs. Strain="521" and "FBD12".
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCGC TCCGCACTGG TCTCCGTGTT GCGCAGCCGT TGCGAGCATC GGCTCGTAAC TTCGCTACTC GTCCCTCGAT TCGTTCGAGC GTTCGTCACT ACAGCTCGCC TGCTCCTGGT  TCGCCACCTC CTCCGCAACC ATCGAGCAGC TCGTCGACCA GCAAGGTGCT GCTTACCTCG GTCGCCATTG CTGCTGCCGC CGGTGGTGCT TTCCTCGCAT TTGGCCGCGA CGACAAAGTG  TCGATCCTGG GCGTCGGCGC AAATGGCGCC AATAAGTTCC AGGGCTCTAA GGGCTCGGTA GGCCCTGCCA CCACCAGCGC TCACTCCAAG GCCGACTACC AGGCTGTCTA CAACGCCATC  GCCGAGCAGC TCGAGGCAAA CCCCGACTAC GACGACGGCT CGTACGGCCC TGTCCTCGTG CGTCTCGCAT GGCACGCTTC AGGTACCTAT GACAAGAACA GCAACACCGG CGGCTCCAAT  GGTGCCACAA TGCGATTCGC CCCCGAATCT GAACACGGCG CTAACGCTGG TCTCGGTGCT GCCCGTGACT TCATGGAGAA GATTCATCAG AAGTTCCCGT GGATCACCTA CTCTGATCTC  TGGACGCTCG GAGGTGTCGC TGCCATTCAG GAGCTTGGCG GCCCCAAGAT CCCTTGGCGC CCTGGCCGCA AGGATGCTAC CGCCGACAAG TGCACTCCTG ATGGCCGACT TCCCGACGGT  GACAAGGGTC CAGACCACCT TCGATACATC TTTTACAAGA TGGGCTTCAA CGACCAGGAA ATTGTGGCAC TCTCGGGTGC GCATGCTCTC GGCCGATGCC ACACGGACCG GTCCGGATTC  GATGGCCCTT GGACTTTTGC TCCTACGTCG TTCACCAACG AATACTTTAA CCTGCTTATG AACGAAAAGT GGAACATCCG AAAGTGGAAC GGCCCTCCTC AATTCGAGGA CAAGTCGACC  AAGAGCCTCA TGATGCTCAT GACCGACATG GCTCTGGTGC AGGACCCTTC GTTCAAGAAG CACGTTCAGC GCTACGCCAA GAGCGAGGAC GAATTCTTCA ACGACTTCCG CAGTGCCTAC 
GCCAAGCTAC TTGAGCTCGG TGTCCCAGCT GAAAACTTCA AGGCTTTCGA GACCAAGCTC GACGGTGGCA AACCGTTCGA GTTTGCTACT TCAGCTGAGC AGGAGAACGC CAACTAA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCGC TCCGCACTGG TCTCCGTGTT GCGCAGCCGT TGCGAGCATC GGCTCGTAAC TTCGCTACTC GTCCCTCGAT TCGTTCGAGC GTTCGTCACT ACAGCTCGCC TGCTCCTGGT  TCGCCACCTC CTCCGCAACC ATCGAGCAGC TCGTCGACCA GCAAGGTGCT GCTTACCTCG GTCGCCATTG CTGCTGCCGC CGGTGGTGCT TTCCTCGCAT TTGGCCGCGA CGACAAAGTG  TCGATCCTGG GCGTCGGCGC AAATGGCGCC AATAAGTTCC AGGGCTCTAA GGGCTCGGTA GGCCCTGCCA CCACCAGCGC TCACTCCAAG GCCGACTACC AGGCTGTCTA CAACGCCATC  GCCGAGCAGC TCGAGGCAAA CCCCGACTAC GACGACGGCT CGTACGGCCC TGTCCTCGTG CGTCTCGCAT GGCACGCTTC AGGTACCTAT GACAAGAACA GCAACACCGG CGGCTCCAAT  GGTGCCACAA TGCGATTCGC CCCCGAATCT GAACACGGCG CTAACGCTGG TCTCGGTGCT GCCCGTGACT TCATGGAGAA GATTCATCAG AAGTTCCCGT GGATCACCTA CTCTGATCTC  TGGACGCTCG GAGGTGTCGC TGCCATTCAG GAGCTTGGCG GCCCCAAGAT CCCTTGGCGC CCTGGCCGCA AGGATGCTAC CGCCGACAAG TGCACTCCTG ATGGCCGACT TCCCGACGGT  GACAAGGGTC CAGACCACCT TCGATACATC TTTTACAAGA TGGGCTTCAA CGACCAGGAA ATTGTGGCAC TCTCGGGTGC GCATGCTCTC GGCCGATGCC ACACGGACCG GTCCGGATTC  GATGGCCCTT GGACTTTTGC TCCTACGTCG TTCACCAACG AATACTTTAA CCTGCTTATG AACGAAAAGT GGAACATCCG AAAGTGGAAC GGCCCTCCTC AATTCGAGGA CAAGTCGACC  AAGAGCCTCA TGATGCTCAT GACCGACATG GCTCTGGTGC AGGACCCTTC GTTCAAGAAG CACGTTCAGC GCTACGCCAA GAGCGAGGAC GAATTCTTCA ACGACTTCCG CAGTGCCTAC 
GCCAAGCTAC TTGAGCTCGG TGTCCCAGCT GAAAACTTCA AGGCTTTCGA GACCAAGCTC GACGGTGGCA AACCGTTCGA GTTTGCTACT TCAGCTGAGC AGGAGAACGC CAACTAA 

Retrieve as FASTA