Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
331 (308) |
PWM (Da): |
35542.57 (33094.2) |
Transmb domain: |
i7-26o |
PI (pH): |
9.73 (9.53) |
Peptide Signal: |
cut: 24 range:24-331 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MGRGYNLLFVLVTFLVLVAAVTAQGNRGSNSGGGRRPHVGFYGNR CRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLLAGNTSERTAVPNRSLRGFEVIEEAKARLEK ACPRTVSCADILTLAARDAVVLTGGQRWEVPLGRLDGRISQASDVNLPGPSDSVAKQKQDFAAKTLNTLDLVTLVGGHTIGTAGCGLVRGRFVNFNGTGQPDPSIDPSFVPLILAQCPQN GGTRVELDEGSVDKFDTSFLRKVTSSRVVLQSDLVLWKDPETRAIIERLLGLRRPSLRFGTEFGKSMVKMSLIEVKTGSDGEIRRVCSAIN |
Retrieve as FASTA
|
|
Remarks |
Complete sequence from genomic (introns 2 and 3), 6 cDNA and 113 ESTs. |
Promoter►
Send to BLAST
Send to cis Analysis
|
|
Terminator +►
Send to BLAST
Send to cis Analysis
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GATTTAAAAA AACACAAATG TGAGCTTTGT TTTTCATTTA TGAATTCGTT AATTAATAAT CACTTGTTTT AAATAAAAGC TTGCTACAGC ATTTTGTGGT CGATGGTTAC GTTTTGATTT
TCAAGTGTAA GATTGTACTT GTAAACAAAA AATGTATTAT ATAAAAGTGT TATTTGTTTC TTCACTCGTG TACGGAATAT GTTTAAATGA ACGAACTTTT CAAGGAAAAA GTGTTGAATA
TGTTTGATTA ATGGAAGCTT ATCTATTATC GGAGTTGATA TTTGATTATC TGAAAAGATT AAATATACAT ATGATGTTGT TTGGACAATT CATGGATTAG AGAAGTTAGG ACCTCTTGTG
GATTCCAGCG AAGTTACAAT CGCTAATCAT TATCCTAAGT TTGTATTTAT CGAAAATGCC TAATTAGGAA ACGACTTTTT TTGTTTGGGA CAAAGAAAAC AAATTTCTAA ATATGTTTTT
TTTCTTCTAA ATAATCATTA ATTCATTATG TATCACAAAT TCACAATGAT GTTTTAACTT ACTACTAATA CAAGATTTGT GTGTTTTATT TTGAATTGCG GTTACGCTAT CATATTCAAT
GCTATCATCC CCACTTAAAA AATCGAAAGG AATCACTTAT GGCTATCCAA TTTGTGTGAA TTGATTCATA GTCAAAATAG CCAGGCTGAT GCTTTCGCAA AGGAGGCTCT CCTCCTCCCC
TGTTTGGAAC CCTAACTTTT TCGAATGAGA TGAATTGATT TTGCCCCAAA AAAAAAAAAT CAACAATAAA ACCAAGAATA TGCATCATCA AAGTTTTCTG GAATATATTA GATCGATTGA
GAATGATGTA TACTGATCTT TGGTTCGCTT TTGTGCCAAA ATAAGTTAGT CAAAAGAGGT CAACATGATC ATAAATTGAC GAACGAATGA TCGTAGTTTC TTCCTTCCAA ATTAAAAATT
CGGGCTTTTA GGGTTTCATT AGCAATTGGG CCATTTCTAG
|
Retrieve as FASTA
|
|
DNA ►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGGTCGTGGTTACAATTTGCTATTCGTTCTAGTAACGTTTTTAGTATTGGTTGCAGCTGTAACCGCACAAGGGAACCGTGGCTCAAACAGCGGTGGTGGTCGAAGACCACATGTTGGG TTTTATGGGAATAGATGCCGAAACGTAGAGTCTATTGTGAGATCTGTAGTTCAGTCTCATGTCCGGTCTATCCCGGCTAATGCACCTGGAATTTTGCGAATGCATTTCCACGATTGCTTT GTCCATGGCTGCGATGGCTCGGTTCTCCTCGCTGGTAACACCTCAGAGAGAACCGCAGTTCCGAACCGTTCATTGAGAGGGTTCGAAGTTATTGAAGAAGCTAAGGCTCGGCTTGAGAAG GCTTGTCCTCGTACCGTTTCTTGTGCTGATATTCTCACCCTTGCAGCCCGAGACGCCGTCGTTTTGGTAATATACTGAAATTATTACATGCATTACATATTTCATTCGATTTCTTACTTT CTTATTTATGTGTGTATTTCACATGATTAAAATATATAACATATATATATGGTCGTGTTTAGCGGTAATTTAATATTGGTTTATGCAGACACCGGTGGACAACGCTGGGAAGTGCCCTTG GGACGTCTCGACGGCCGAATCTCGCAAGCCTCAGACGTGAACTTGCCCGGACCAAGCGACTCCGTTGCTAAGCAGAAGCAAGACTTCGCTGCTAAAACTCTCAACACATTAGACCTCGTG ACTCTTGTTGGTACGTTGTCATTGCATATGGTTTAAATGTAACACTTTGTAAGTTATTCAGAAAATAATTTCCTAGTAGCTAATTTCTAAGTGAGTTTTGGTTTTGACCAGGCGCGGACA CACAATAGGAACTGCTGGCTGCGGTCTAGTAAGGGGAAGGTTCGTTAACTTCAACGGCACAGGACAACCTGACCCATCAATCGACCCGAGTTTTGTGCCGCTGATTCTGGCTCAGTGCCC TCAAAATGGAGGCACCCGAGTGGAGTTAGACGAGGGAAGTGTTGACAAGTTTGACACATCGTTCCTAAGGAAGGTGACGTCAAGTCGCGTGGTTCTCCAATCCGATCTAGTCCTATGGAA GGATCCCGAGACCCGAGCCATCATTGAACGTTTATTAGGATTACGCCGACCATCCTTGAGGTTCGGAACCGAGTTCGGGAAGTCGATGGTCAAAATGAGTCTCATAGAAGTTAAGACTGG ATCAGATGGGGAGATTCGTCGGGTTTGTTCCGCCATCAACTAA |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGGTCGTGGTTACAATTTGCTATTCGTTCTAGTAACGTTTTTAGTATTGGTTGCAGCTGTAACCGCACAAGGGAACCGTGGCTCAAACAGCGGTGGTGGTCGAAGACCACATGTTGGG TTTTATGGGAATAGATGCCGAAACGTAGAGTCTATTGTGAGATCTGTAGTTCAGTCTCATGTCCGGTCTATCCCGGCTAATGCACCTGGAATTTTGCGAATGCATTTCCACGATTGCTTT GTCCATGGCTGCGATGGCTCGGTTCTCCTCGCTGGTAACACCTCAGAGAGAACCGCAGTTCCGAACCGTTCATTGAGAGGGTTCGAAGTTATTGAAGAAGCTAAGGCTCGGCTTGAGAAG GCTTGTCCTCGTACCGTTTCTTGTGCTGATATTCTCACCCTTGCAGCCCGAGACGCCGTCGTTTTGACCGGTGGACAACGCTGGGAAGTGCCCTTGGGACGTCTCGACGGCCGAATCTCG CAAGCCTCAGACGTGAACTTGCCCGGACCAAGCGACTCCGTTGCTAAGCAGAAGCAAGACTTCGCTGCTAAAACTCTCAACACATTAGACCTCGTGACTCTTGTTGGCGGACACACAATA GGAACTGCTGGCTGCGGTCTAGTAAGGGGAAGGTTCGTTAACTTCAACGGCACAGGACAACCTGACCCATCAATCGACCCGAGTTTTGTGCCGCTGATTCTGGCTCAGTGCCCTCAAAAT GGAGGCACCCGAGTGGAGTTAGACGAGGGAAGTGTTGACAAGTTTGACACATCGTTCCTAAGGAAGGTGACGTCAAGTCGCGTGGTTCTCCAATCCGATCTAGTCCTATGGAAGGATCCC GAGACCCGAGCCATCATTGAACGTTTATTAGGATTACGCCGACCATCCTTGAGGTTCGGAACCGAGTTCGGGAAGTCGATGGTCAAAATGAGTCTCATAGAAGTTAAGACTGGATCAGAT GGGGAGATTCGTCGGGTTTGTTCCGCCATCAACTAA |
Retrieve as FASTA
|
|
cDNA►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ACACAACAAA CACAACTTCT ACAAGACTCA AATAGTTTCT ATTTAATTAC TAAAAAGAAA AATGGGTCGT GGTTACAATT TGCTATTCGT TCTAGTAACG TTTTTAGTAT TGGTTGCAGC
TGTAACCGCA CAAGGGAACC GTGGCTCAAA CAGCGGTGGT GGTCGAAGAC CACATGTTGG GTTTTATGGG AATAGATGCC GAAACGTAGA GTCTATTGTG AGATCTGTAG TTCAGTCTCA
TGTCCGGTCT ATCCCGGCTA ATGCACCTGG AATTTTGCGA ATGCATTTCC ACGATTGCTT TGTCCATGGC TGCGATGGCT CGGTTCTCCT CGCTGGTAAC ACCTCAGAGA GAACCGCAGT
TCCGAACCGT TCATTGAGAG GGTTCGAAGT TATTGAAGAA GCTAAGGCTC GGCTTGAGAA GGCTTGTCCT CGTACCGTTT CTTGTGCTGA TATTCTCACC CTTGCAGCCC GAGACGCCGT
CGTTTTGACC GGTGGACAAC GCTGGGAAGT GCCCTTGGGA CGTCTCGACG GCCGAATCTC GCAAGCCTCA GACGTGAACT TGCCCGGACC AAGCGACTCC GTTGCTAAGC AGAAGCAAGA
CTTCGCTGCT AAAACTCTCA ACACATTAGA CCTCGTGACT CTTGTTGGCG GACACACAAT AGGAACTGCT GGCTGCGGTC TAGTAAGGGG AAGGTTCGTT AACTTCAACG GCACAGGACA
ACCTGACCCA TCAATCGACC CGAGTTTTGT GCCGCTGATT CTGGCTCAGT GCCCTCAAAA TGGAGGCACC CGAGTGGAGT TAGACGAGGG AAGTGTTGAC AAGTTTGACA CATCGTTCCT
AAGGAAGGTG ACGTCAAGTC GCGTGGTTCT CCAATCCGAT CTAGTCCTAT GGAAGGATCC CGAGACCCGA GCCATCATTG AACGTTTATT AGGATTACGC CGACCATCCT TGAGGTTCGG
AACCGAGTTC GGGAAGTCGA TGGTCAAAAT GAGTCTCATA GAAGTTAAGA CTGGATCAGA TGGGGAGATT CGTCGGGTTT GTTCCGCCAT CAACTAAGAT TTAAAAAAAC ACAAATGTGA
GCTTTGTTTT TCATTTATGA ATTCGTTAAT TAATAATCAC TTGTTTTAAA TAAAAGCTTG CTACAGCATT TTGTGGTCGA TGGTTACGTT TTGATTTTCA AGTGTAAGAT TGTACTTGTA
AACAAAAAAT GTATTATATA AAAGTGTTAT TTGTTTCTTC
|
Retrieve as FASTA
|
|