Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
329 (304) |
PWM (Da): |
35790.57 (33139.2) |
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PI (pH): |
9.93 (9.93) |
Peptide Signal: |
cut: 26 range:26-329 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MARFSLVVVVTLSLAISMFPDTTTAQLKTNFYGNSCPNVEQIVKK VVQEKIKQTFVTIPATLRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNISLAGDGFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKGPSYAVELGRFDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQEDMIA LSAAHTLGFAHCGKVFNRIYNFNLTHAVDPTLNKAYAKELQLACPKTVDPRIAINMDPTTPRQFDNIYFKNLQQGKGLFTSDQVLFTDGRSKPTVNDWAKNSVAFNKAFVTAMTKLGRVG VKTRRNGNIRRDCGAFN |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (3 introns), 4 cDNA and 11 ESTs (10 only in roots) |
Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TCATCCTTTT TGGGTTTTGT TTTCGAGATT TGTTCTTTGA CATGTTATGA GTTTTTGTTT TGTTGTCTTC TGTTTGTTTC TGCTTCTTGT ATTTTTGAAA AACACATTAA CGAATCTATA
CCGTTGTTTT ATTTCTCGTG ACTGTAATAT TAATAATCTT ATTTCTATTA AACTTGTTTA ATAAATCCAA TCTGAGCATC AAAATCAAGA CAAACCAAGA CATATATACA CAAAACCTAA
AGATGTTCAA AACTTAAAAC TCTGTAAAGG AAGAATCTGA TCTATCTAGA GTTAGTAGCT TATCTGAATC TGCAGGCGAT CTTCTCAAGC TTTGTAGGCC AATCTTCCCC TAGTATCGAT
GGGTTTAACG CCATAGCTAC TTGAAAATCT ACCAGAGAAG ATGCTGATGA AGCGTTACTA GACCTTGAAG CTGCTAGTTC AAGACACGGT TTGATCAATC TCTTCAAGAA AACATCTAGC
CCTGCGTTTA ACGAGTTAGC AAACCCAACC GAAACCTCTA ATCCTTCCTC CAAGTCATCT TCGAGTTTCT TCTTTAAAGA AACCGAATCA GGAAGCTCAC CAGAGGAGTA ACAACACGTG
TCTATACGAT GTTGTTTCTT TATAACATCT CTAAGATTAA CACCAAAAGG AGCTTCAATA GGTTGACTTC TCCAACATGG AATCAATTGG TCAACTTCTT CAACATTTTC CATTGACCAT
TGTTGCCTAC CACTAGAAGA AACAACCTCA GTGACTAGAC TCTTCCCTTT GCTAATATTA CCATCTTTAT TAAGCCTCCG TTGAGTCCTT CCTTTACGAG GTGATCTAGG AAGTTCTTTG
CACAAAGATT GAAAAGCTCC ATTTAGTTGC TTCTTCTTCT TGTTATCTGA CTCTACACCA TTCTTTACGA ATGGAGGTAG TGTCTTTGAG AGACATATAT TCTTAAGAAT CCCTCTAAGC
AAAGCGTTGT GTAGACTTAT ATTCTCCCTC TTCACCGTCA
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Retrieve as FASTA
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DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCGCGGTTCAGTCTGGTTGTAGTCGTGACTCTTAGTCTTGCCATCTCTATGTTCCCTGACACAACCACTGCTCAACTCAAAACCAATTTCTACGGAAACTCATGTCCGAATGTTGAA CAAATCGTGAAAAAAGTCGTCCAAGAAAAAATCAAACAGACCTTCGTCACCATCCCAGCTACTCTCCGCCTCTTCTTCCACGATTGCTTCGTCAATATGTAATGCTCAAACTTTTGTTGA TTTTTGTATTAGAAACCTTTTATGCAATGATTTCTTAAAAATTTTGGTTGGTATGTATAAATAGGGATGTGATGCGTCGGTCATGATTCAATCAACGCCTACCAACAAAGCCGAGAAGGA TCATCCAGACAATATTTCTTTGGCCGGAGATGGATTTGACGTTGTGATCAAAGCCAAGAAAGCTCTTGACGCTATCCCAAGTTGCAAAAACAAAGTCTCTTGTGCTGATATTCTTGCTTT AGCCACCCGTGATGTTGTTGTCGCCCCGTAAGTTATATATTTCATTTTCTTCCAATCAGTATAAAAGTGTTTTTGGGGAAAAGAAATAAAAACCATATGTTAAATATTAAAACATGTGTT ATCTATTATACAACAATGATTAAGTGGTGTACGTGTACGCAATTTTCAAAAAAAAGTTCGGATGTGTGTAGGCCAAAGGTCCGTCGTACGCAGTGGAACTCGGAAGGTTTGATGGTTTGG TGTCGACTGCGGCTAGCGTTAACGGAAACTTGCCCGGACCAAATAACAAAGTTACAGAACTTAACAAGCTTTTTGCCAAAAACAAACTTACCCAAGAGGACATGATCGCTCTTTCAGAGG TAATGCATGATAACATACGTTTATATATATGAAGATAGATTGGTTTAGTTACAAATAAATTTTTGCTCAATATTGGTATTTTTTGTCCATCCCTTAAAAGTAGACCACTTATATATCAAC AAAGTGGATCTAATCTAAGCTATTAAATTTGTCCAATAATGCAGCGGCTCACACACTTGGATTCGCCCATTGTGGCAAAGTGTTCAACAGAATCTACAACTTCAACCTCACACACGCCGT TGACCCAACTCTAAACAAAGCCTACGCTAAAGAACTTCAGTTGGCTTGTCCCAAGACAGTTGACCCAAGAATCGCCATCAACATGGACCCAACCACTCCAAGACAATTCGACAACATTTA CTTCAAGAATCTGCAACAAGGCAAAGGACTCTTCACTTCCGACCAAGTTCTCTTCACCGATGGTCGCTCAAAGCCCACCGTTAACGATTGGGCCAAGAATTCTGTTGCTTTCAACAAGGC TTTCGTAACCGCTATGACCAAACTCGGCCGCGTTGGCGTTAAGACTAGACGCAACGGTAACATTCGTCGTGACTGTGGTGCCTTTAACTGA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCGCGGTTCAGTCTGGTTGTAGTCGTGACTCTTAGTCTTGCCATCTCTATGTTCCCTGACACAACCACTGCTCAACTCAAAACCAATTTCTACGGAAACTCATGTCCGAATGTTGAA CAAATCGTGAAAAAAGTCGTCCAAGAAAAAATCAAACAGACCTTCGTCACCATCCCAGCTACTCTCCGCCTCTTCTTCCACGATTGCTTCGTCAATGGATGTGATGCGTCGGTCATGATT CAATCAACGCCTACCAACAAAGCCGAGAAGGATCATCCAGACAATATTTCTTTGGCCGGAGATGGATTTGACGTTGTGATCAAAGCCAAGAAAGCTCTTGACGCTATCCCAAGTTGCAAA AACAAAGTCTCTTGTGCTGATATTCTTGCTTTAGCCACCCGTGATGTTGTTGTCGCCGCCAAAGGTCCGTCGTACGCAGTGGAACTCGGAAGGTTTGATGGTTTGGTGTCGACTGCGGCT AGCGTTAACGGAAACTTGCCCGGACCAAATAACAAAGTTACAGAACTTAACAAGCTTTTTGCCAAAAACAAACTTACCCAAGAGGACATGATCGCTCTTTCAGCGGCTCACACACTTGGA TTCGCCCATTGTGGCAAAGTGTTCAACAGAATCTACAACTTCAACCTCACACACGCCGTTGACCCAACTCTAAACAAAGCCTACGCTAAAGAACTTCAGTTGGCTTGTCCCAAGACAGTT GACCCAAGAATCGCCATCAACATGGACCCAACCACTCCAAGACAATTCGACAACATTTACTTCAAGAATCTGCAACAAGGCAAAGGACTCTTCACTTCCGACCAAGTTCTCTTCACCGAT GGTCGCTCAAAGCCCACCGTTAACGATTGGGCCAAGAATTCTGTTGCTTTCAACAAGGCTTTCGTAACCGCTATGACCAAACTCGGCCGCGTTGGCGTTAAGACTAGACGCAACGGTAAC ATTCGTCGTGACTGTGGTGCCTTTAACTGA |
Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ACCATTCCTG TAAACACAAA AACTTGTAAT TTCCAACGAA ATGGCGCGGT TCAGTCTGGT TGTAGTCGTG ACTCTTAGTC TTGCCATCTC TATGTTCCCT GACACAACCA CTGCTCAACT
CAAAACCAAT TTCTACGGAA ACTCATGTCC GAATGTTGAA CAAATCGTGA AAAAAGTCGT CCAAGAAAAA ATCAAACAGA CCTTCGTCAC CATCCCAGCT ACTCTCCGCC TCTTCTTCCA
CGATTGCTTC GTCAATGGAT GTGATGCGTC GGTCATGATT CAATCAACGC CTACCAACAA AGCCGAGAAG GATCATCCAG ACAATATTTC TTTGGCCGGA GATGGATTTG ACGTTGTGAT
CAAAGCCAAG AAAGCTCTTG ACGCTATCCC AAGTTGCAAA AACAAAGTCT CTTGTGCTGA TATTCTTGCT TTAGCCACCC GTGATGTTGT TGTCGCCGCC AAAGGTCCGT CGTACGCAGT
GGAACTCGGA AGGTTTGATG GTTTGGTGTC GACTGCGGCT AGCGTTAACG GAAACTTGCC CGGACCAAAT AACAAAGTTA CAGAACTTAA CAAGCTTTTT GCCAAAAACA AACTTACCCA
AGAGGACATG ATCGCTCTTT CAGCGGCTCA CACACTTGGA TTCGCCCATT GTGGCAAAGT GTTCAACAGA ATCTACAACT TCAACCTCAC ACACGCCGTT GACCCAACTC TAAACAAAGC
CTACGCTAAA GAACTTCAGT TGGCTTGTCC CAAGACAGTT GACCCAAGAA TCGCCATCAA CATGGACCCA ACCACTCCAA GACAATTCGA CAACATTTAC TTCAAGAATC TGCAACAAGG
CAAAGGACTC TTCACTTCCG ACCAAGTTCT CTTCACCGAT GGTCGCTCAA AGCCCACCGT TAACGATTGG GCCAAGAATT CTGTTGCTTT CAACAAGGCT TTCGTAACCG CTATGACCAA
ACTCGGCCGC GTTGGCGTTA AGACTAGACG CAACGGTAAC ATTCGTCGTG ACTGTGGTGC CTTTAACTGA TCATCCTTTT TGGGTTTTGT TTTCGAGATT TGTTCTTTGA CATGTTATGA
GTTTTTGTTT TGTTGTCTTC TGTTTGTTTC TGCTTCTTGT ATTTTTGAAA AACACATTAA CGAATCTATA CCGTTGTTTT ATTTCTCGTG ACTGTAATAT TAATAATCTT ATTTCTATTA
AACTTGTTTA ATAAATCC
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Retrieve as FASTA
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