Entry information : PcocLiP
Entry ID 2428
Creation 2005-11-23 (Christophe Dunand)
Last sequence changes 2005-11-23 (Christophe Dunand)
Sequence status partial
Reviewer reviewer name not stored
Last annotation changes 2008-09-19 (Christophe Dunand)
Peroxidase information: PcocLiP
Name PcocLiP
Class Lignin peroxidase     [Orthogroup: LiP002]*
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Polyporaceae Pycnoporus
Organism Pycnoporus coccineus    [TaxId: 158605 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PcocLiP
start..stop
S start..stop
TcinLiP01_DSH97 236 2e-81 1..125 37..161
TcinLiP03_DSH97 234 8e-81 1..125 37..161
TcinLiP02_DSH97 230 5e-79 1..125 37..161
TvLiP12_PRL572 234 2e-78 1..125 111..235
Literature and cross-references PcocLiP
Literature Pointing,S.B.,Pelling,A.L., Smith,G.J., Hyde,K.D. and Reddy,C.A. Screening of basidiomycetes and xylariaceous fungi for lignin peroxidase and laccase gene-specific sequences Mycol. Res. 109 (PT 1), 115-124 (2005)
DNA ref. GenBank:   AY243868
Protein sequence: PcocLiP
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   125
PWM (Da):   %s   13255.66  
PI (pH):   %s   3.98
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
NIGLDEIVEL QKPFVQRHNL SVADLIQFAG AIGVSNCPGA PQLAAFVGRK DATQPAPDGL VPEPFHTPDQ IFDRLADASQ GEFDPILTVW LLTAHTVAAA NDVDPTVPGS PFDSTPGLWD 
TQFFL 

Retrieve as FASTA  
Remarks Partial sequence from genomic DNA, 5' and 3' are missing. Strain="CBS 355.63".