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Entry information : PcocLiP
Entry ID 2428
Creation 2005-11-23 (Christophe Dunand)
Last sequence changes 2005-11-23 (Christophe Dunand)
Sequence status partial
Reviewer reviewer name not stored
Last annotation changes 2008-09-19 (Christophe Dunand)
Peroxidase information: PcocLiP
Name PcocLiP
Class Lignin peroxidase     [Orthogroup: LiP002]*
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Polyporaceae Pycnoporus
Organism Pycnoporus coccineus    [TaxId: 158605 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PcocLiP
start..stop		 S start..stop
TcinLiP01_DSH97 236 1.79e-81 1..125 37..161
TcinLiP03_DSH97 234 8.47e-81 1..125 37..161
TcinLiP02_DSH97 230 5.26e-79 1..125 37..161
TvLiP12_PRL572 234 2.04e-78 1..125 111..235
Literature and cross-references PcocLiP
Literature Pointing,S.B.,Pelling,A.L., Smith,G.J., Hyde,K.D. and Reddy,C.A. Screening of basidiomycetes and xylariaceous fungi for lignin peroxidase and laccase gene-specific sequences Mycol. Res. 109 (PT 1), 115-124 (2005)
DNA ref. GenBank:   AY243868
Protein sequence: PcocLiP
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   125
PWM (Da):   %s   13255.66  
PI (pH):   %s   3.98
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
NIGLDEIVEL QKPFVQRHNL SVADLIQFAG AIGVSNCPGA PQLAAFVGRK DATQPAPDGL VPEPFHTPDQ IFDRLADASQ GEFDPILTVW LLTAHTVAAA NDVDPTVPGS PFDSTPGLWD 
TQFFL 

Retrieve as FASTA  
Remarks Partial sequence from genomic DNA, 5' and 3' are missing. Strain="CBS 355.63".