Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
173 |
PWM (Da): |
19201.86 |
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PI (pH):
| 9.83 |
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Sequence 316
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MGASSSSSVSEKSIHQFTVKDSSGKEVDLSVYQGKVLLVVNVASKCGFTESNYTQLTELYRKYKDGFVVLAFPCNQFLSQEPGTSEEAHQFACTRFKAEYPVFQVRVNGQNAAPVYKFLKSKKPSFLGSRIKWNFTKFLVGKDGQVIDRYGTTVSPLSIQKDIEKALAQEL* |
Retrieve as FASTA
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Remarks |
Sequence from 5 cDNAs and 9 ESTs (UNIGENE At.43439) |
Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ACACGCACAG AGATATTTGA CTCCTTTGGA AGAAACTTCT CTCATACTCT CGGTCATGCA GTCAAGTTTC TACATTTCCC ATTGCACCTT CCATATGGGC CTTGTATTCA TCTTATGTGT
AACTCTACTA GCCATTTCTT TTGTGAAATT TGATCAAAGG TGATTCCAAT AAGTTGATTT GAACCCATAA AAAAAAGAAA AAAAAAAACT AATTCCAACA AATACAAACC ACCAGCTAAG
CTAAAGATTA GACGAAATCA GCAAGATCAA AATAAAACAT CAATGATTTT CACTCAAGAG AACGCCTATA ACAACGTCTT AGGATACCAA AAGACATTTT AGTCTATCTA TCACTCTCAC
CATTTACTTT TTATGGTGCA AATTACTCAG TTTCGACGAT AATTAATGTT TAAATCTGTC TCATGTGTTC AATGAGAACT TCTTTCCATC TGTAATGTAT CGATTATAAG TGGCGTATCA
CTCTCACGTG CGCTGTTTGT GAAACGTGGC AGACAATTGA AGAAATAGAG AGTACAAAGG AGAAAAAAGG AGTACTTAAA AGGAGACCTT GACCACTCTT TCATGCATCC ATCCTTCTTC
TTTCTTGTCT TATCAGTTTC TTTTGCTTTT GTTAGAGATT AGTCAAACTA CTGATATTAT TAACATTAAC CATTTTTATG GCTTTATTTT GTGAACAAAC GACCCACCTA TCCCATAATC
ACTAATTAGA CATTACAACT AGTGTACTGT CTTTTCCATT TTATTTTTTC TCTGTGTATT ATATTTACAT TTTTTCTTCT TCTTCGATTA GCACTGGGTA TCCCGTCAAG AGTTTTCAAA
ACCGAAGATA GGGACCAATA CCAACTACTC CCGAAAGTGA GCAAGCCCCG AGCTTTCCTC CATGAGTCTA CGTGACCCGA ACAAAGCTAC TTAGTTTGGA GATTTGTGTA GAGCCCCGTC
CTTTAGGTTC TGGCTCAACT ACCATTGCAC TGCCTTTTAT TT
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Retrieve as FASTA
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DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGGTGCTTCATCATCATCATCTGTGTCGGAGAAATCAATCCATCAATTCACCGTCAAGGTTTTCTAATTTATGAATCCCTTTTCTTCATTGTTTGTTTATCTGATGAATGAATGCGTT TCTGACTTGTTTGTCTGATCTATCGGAAATTAGGATAGCTCCGGCAAGGAGGTTGACCTAAGCGTGTATCAAGGGAAAGTGCTGCTCGTCGTCAACGTCGCTTCTAAATGGTCCGTCAGA TCCTCCGATCATCTTCTCTCTAGTTAATTATTATTTCTTGATTCTAAATTTTTTGTTAACAAACAATTTGGGGAACAGCGGATTCACGGAGTCCAATTACACCCAGCTGACGGAACTTTA CCGGAAATATAAAGATCAAGGTCAGACCATACAAGAATATTAGAATAGGAATGTATATATTCCTTTCTAATAAAGAAGACTCTTCTTCTTTTGCTTTCCCTTGTTACTTCATCGTTTATG TAAGATTTTTTGTTTTGGTTTCCTTTGGATCATCATCAGGTTTTGTGGTATTGGCGTTTCCTTGCAACCAGTTTCTGTCCCAAGAGCCTGGCACCAGCGAAGAGGCTCATCAATTTGCTT GTACTCGCTTTAAGGCTGAATACCCTGTTTTCCAAAAGGTACCTCAACAAACAAGACACTTTTCTTCTTCATATGCCTTTAATAGGTAGCTGATTTTGTAAGTTTATAACTAAGCATGAA TGATCATGATCATCTATGTGTGTGTGTAGGTGCGTGTAAATGGACAAAACGCTGCACCAGTCTACAAATTCCTCAAATCTAAGAAACCCTCTTTTCTTGGAAGTCGTATCAAATGGAACT TCACCAAGTTCTTGGTCGGCAAAGATGGTCAAGTCATTGATCGTTATGGCACAACTGTTTCACCTCTATCCATCCAGGTCTCTAACTCTCTTGTTCTTCATATTCTATTATAAAATCATA TCACTCTTTTATGGCTTACTTCATGTTTGTTTTCTGCATAACAGAAAGACATCGAGAAAGCCCTTGCACAAGAATTGTGA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGGTGCTTCATCATCATCATCTGTGTCGGAGAAATCAATCCATCAATTCACCGTCAAGGATAGCTCCGGCAAGGAGGTTGACCTAAGCGTGTATCAAGGGAAAGTGCTGCTCGTCGTC AACGTCGCTTCTAAATGCGGATTCACGGAGTCCAATTACACCCAGCTGACGGAACTTTACCGGAAATATAAAGATCAAGGTTTTGTGGTATTGGCGTTTCCTTGCAACCAGTTTCTGTCC CAAGAGCCTGGCACCAGCGAAGAGGCTCATCAATTTGCTTGTACTCGCTTTAAGGCTGAATACCCTGTTTTCCAAAAGGTGCGTGTAAATGGACAAAACGCTGCACCAGTCTACAAATTC CTCAAATCTAAGAAACCCTCTTTTCTTGGAAGTCGTATCAAATGGAACTTCACCAAGTTCTTGGTCGGCAAAGATGGTCAAGTCATTGATCGTTATGGCACAACTGTTTCACCTCTATCC ATCCAGAAAGACATCGAGAAAGCCCTTGCACAAGAATTGTGA |
Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
AGTTGGTGTG TGTACATATG ACCAAAAACG TCGTGGAGAA GGCTAAAGAA ACAGTCGTGA AAAGCCATTT GTTGTAGTAG AGAGAGAGAG ATTTGAGTTA GGCAATACTG TCACTGATTT
AGGCATTTGA TATTTTGTAA ACAAAATTTT TTGGTTTATT TTTGGGGAGT GGTGGTAATA CACACTAATA TGCATTTCTG TCACCTGGAG AGATGAGATG TCTCTAAAAA ATGGTCAAAG
AGGCGATTAA TTAGTTAAAT AGCAAATGGA AAAAACAATT AGGGATGGGT TTGTTTGTTA CCAAGGAATT AACATAACAG CTGTAATGCT GCTGCGAGAT AAAATGAACA ATGAAGAAGC
GGAGACCTGT TGACTTCAAA TAATTTTAAT TAGTTTCTTC TGTGCGATAG AGATCGATCG AGAGATGGGT GCTTCATCAT CATCATCTGT GTCGGAGAAA TCAATCCATC AATTCACCGT
CAAGGATAGC TCCGGCAAGG AGGTTGACCT AAGCGTGTAT CAAGGGAAAG TGCTGCTCGT CGTCAACGTC GCTTCTAAAT GCGGATTCAC GGAGTCCAAT TACACCCAGC TGACGGAACT
TTACCGGAAA TATAAAGATC AAGGTTTTGT GGTATTGGCG TTTCCTTGCA ACCAGTTTCT GTCCCAAGAG CCTGGCACCA GCGAAGAGGC TCATCAATTT GCTTGTACTC GCTTTAAGGC
TGAATACCCT GTTTTCCAAA AGGTGCGTGT AAATGGACAA AACGCTGCAC CAGTCTACAA ATTCCTCAAA TCTAAGAAAC CCTCTTTTCT TGGAAGTCGT ATCAAATGGA ACTTCACCAA
GTTCTTGGTC GGCAAAGATG GTCAAGTCAT TGATCGTTAT GGCACAACTG TTTCACCTCT ATCCATCCAG AAAGACATCG AGAAAGCCCT TGCACAAGAA TTGTGAACAC GCACAGAGAT
ATTTGACTCC TTTGGAAGAA ACTTCTCTCA TACTCTCGGT CATGCAGTCA AGTTTCTACA TTTCCCATTG CACCTTCCAT ATGGGCCTTG TATTCATCTT ATGTGTAACT CTACTAGCCA
TTTCTTTTGT GAAATTTGAT CAAAGGTGAT TCCAATAAGT TGATTTGAAC CC
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Retrieve as FASTA
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