Sequence Properties
first value : protein second value (mature protein)
|
Length (aa): |
232 |
PWM (Da): |
25497.24 |
|
PI (pH):
| 9.86 |
|
Sequence 375
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MLRSSIRLLYIRRTSPLLRSLSSSSSSSSSKRFDSAKPLFNSHRIISLPISTTGAKLSRSEHSMAASSEPKSLYDFTVKDAKGNDVDLSIYKGKVLLIVNVASQCGLTNSNYTELAQLYEKYKGGFEILAFPCNQFGNQEPGTNEEIVQFACTRFKAEYPIFDVDVNGDKAAPVYKFLKSSKGGLFGDGIKWNFAKFLVDKDGNVVDRFAPTTSPLSIEKDVKKLLGVTA* |
Retrieve as FASTA
|
|
Remarks |
Complete sequence from genomic (5 introns), 7 cDNAs and 76 ESTs. |
Promoter►
Send to BLAST
Send to cis Analysis
|
|
Terminator +►
Send to BLAST
Send to cis Analysis
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GCAAGGCAAG ATTGCATAAT TAGACAAATA AAAGCTCATT AGTATTGTAT TACCAATACT GTGTAGTAAG CTGAGTTCGT GAGTGTGTGC CTTTGGGACC GCGTACAATT ATAATCCGTT
TTTTAGCGGC CAAACTATGT AATAATCGTA GATCTAAATA TCAGATTTCC CGTTACCTTA CAATTTGGAT CAGTCTTTGT TACCAAAGCA TGAAACTGTG TCTCCTACAA CAACCGAACA
GTCTCTACAT AATCCGGAAA AACCATTGCT TTTGTTTCCC GATGCTTGAA GTCATAGCCT CCGTGTACTT CAACCTTGGT TTTTCTTAAA CTTTTCGTGT CGGGATTGTA ATAGATAACA
TAAAAGCTAT TAGAATAGAA CCGTGGTGCC AAAATAAACT CACCTGTATG AGTAGTGCCT GTGATAAATA AATCACAAAA TAACCACCTC CTAACACCTT TGATACTGAA ACTTTTCTTC
AACCATCCAT GAATTTCGGC TTGCTGATCC AAAACCCACA CTTCAATACC AATAAATAAA GTTTTAGTGG CTAAGGCTAC TTTCCCCTTG TACCTCATCA AAGTGAAACC ATGTAGAAAT
GCAGCTGGAA AGTCCGCGGG TAAACTAGTA AAAAGATCCA ACTTTTCAGA CCCCAAATCG AATCTCATTA AGCTCAGCTG TGACAAATCT TCGCCCGTAA AAGCAACATA ATATAAAACA
CCATCTATGC ACACACTGTT CAGCACAGGA CCGTGAGGAG TTGTATAATC AATCATTCTC CATGGTTTCT TTTTAACTCC CAATGGGAAT ACTTGATGTT GAGATGATAG TTGTAATATT
CGAGTTCGAC CGTCATGACG TTGCATTTTT TCCTTCATGC ACAATACCAA TAGTTTGTAT TCATCATTAA CCGGATCATA CCCCAAAAAA CATTGCGCAA CCTTACTATT GGTTTGGACT
CTCCCTAAAA CTGTGGATTT ACCGGTGCTA GGGTTAGTTA
|
Retrieve as FASTA
|
|
DNA ►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCTTCGCTCCTCAATTCGACTTCTCTATATAAGAAGAACCAGTCCTCTGCTTCGAAGTTTATCATCATCATCATCATCATCATCATCAAAACGATTCGATTCTGCGAAACCACTTTTC AATTCTCATCGGATTATTTCTCTTCCAATTTCTACAACGGGAGCTAAACTATCTAGATCGGAGCATTCAATGGCTGCTTCTTCCGAACCCAAATCTCTTTACGATTTCACCGTCAAGGTT CGATTCAAATGATCCTTTTCTTTGATTCTCTTGCGATTTGATTACGTTTGATTCTCTGAGTTTAATCTTTGACTATTTCGGAAATTTGAATTTGTTGATCGGATTTGGGATTTGGTATTG ATTGATTTATTGGATCAGGATGCTAAGGGAAACGATGTTGATCTAAGCATCTACAAAGGGAAGGTTCTTTTGATTGTGAACGTTGCTTCTCAATGGTAAGATTTCGATTTTGTAACGTTT AGATGTGATCATAGATTCATTGGTTTTAGTGACTTAGTTTCTTTGGTGATTTGATTCTTCTGCAGTGGCTTGACTAATTCGAATTATACTGAGCTTGCGCAGCTGTATGAGAAGTACAAA GGCCATGGTATATAATTTTGTTACTAGTTGTTTCATGTTTGTTTGTGATCATGGTTTATCATCGTGTTTGTTATTGTTGATGGTTGCAATTTTTGATTTAGGTTTCGAGATTCTTGCGTT TCCGTGTAACCAGTTTGGGAATCAAGAGCCTGGTACTAATGAAGAGATTGTTCAGTTTGCTTGTACTCGTTTCAAGGCTGAGTACCCGATTTTCGACAAGGTAACAACTTTTCTTGACAC ACGAGACGAAGATATGTGAGAATGTTGCTAGCTCTTAGAGCATCACTGAATAATTTTTGGAATTGGATGATGTAGTCTGAGTATCAGTGACTCATTTTCAGATAATGTTTCGTTTTGAGT ATAAGTTCTCTACTTGGAGTTGATTCTACCTTTGCACTATGTAATGCAGGTTGATGTTAACGGTGACAAAGCTGCCCCAGTCTACAAGTTTCTGAAATCAAGCAAAGGCGGGCTCTTTGG AGACGGCATTAAGTGGAACTTCGCAAAGTTCTTGGTTGACAAAGATGGAAATGTTGTCGATCGTTTCGCACCAACTACCTCACCTCTCAGCATTGAGGTAATGTCTCTATCACATGTAAT CATCAAAAGCTTGAGTTTTGTTTAGAGCCACAAAGTTTCTAATTGCTTGTCAAATCGTTGTTTCGCAATTGCAGAAGGATGTGAAGAAGTTGTTGGGAGTTACTGCTTAA |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCTTCGCTCCTCAATTCGACTTCTCTATATAAGAAGAACCAGTCCTCTGCTTCGAAGTTTATCATCATCATCATCATCATCATCATCAAAACGATTCGATTCTGCGAAACCACTTTTC AATTCTCATCGGATTATTTCTCTTCCAATTTCTACAACGGGAGCTAAACTATCTAGATCGGAGCATTCAATGGCTGCTTCTTCCGAACCCAAATCTCTTTACGATTTCACCGTCAAGGAT GCTAAGGGAAACGATGTTGATCTAAGCATCTACAAAGGGAAGGTTCTTTTGATTGTGAACGTTGCTTCTCAATGTGGCTTGACTAATTCGAATTATACTGAGCTTGCGCAGCTGTATGAG AAGTACAAAGGCCATGGTTTCGAGATTCTTGCGTTTCCGTGTAACCAGTTTGGGAATCAAGAGCCTGGTACTAATGAAGAGATTGTTCAGTTTGCTTGTACTCGTTTCAAGGCTGAGTAC CCGATTTTCGACAAGGTTGATGTTAACGGTGACAAAGCTGCCCCAGTCTACAAGTTTCTGAAATCAAGCAAAGGCGGGCTCTTTGGAGACGGCATTAAGTGGAACTTCGCAAAGTTCTTG GTTGACAAAGATGGAAATGTTGTCGATCGTTTCGCACCAACTACCTCACCTCTCAGCATTGAGAAGGATGTGAAGAAGTTGTTGGGAGTTACTGCTTAA |
Retrieve as FASTA
|
|
cDNA►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CAAAATAAAT ATCTAATTTT GTGAGAAAAG AATCTTCTTT TGCAAATGCT TCGCTCCTCA ATTCGACTTC TCTATATAAG AAGAACCAGT CCTCTGCTTC GAAGTTTATC ATCATCATCA
TCATCATCAT CATCAAAACG ATTCGATTCT GCGAAACCAC TTTTCAATTC TCATCGGATT ATTTCTCTTC CAATTTCTAC AACGGGAGCT AAACTATCTA GATCGGAGCA TTCAATGGCT
GCTTCTTCCG AACCCAAATC TCTTTACGAT TTCACCGTCA AGGATGCTAA GGGAAACGAT GTTGATCTAA GCATCTACAA AGGGAAGGTT CTTTTGATTG TGAACGTTGC TTCTCAATGT
GGCTTGACTA ATTCGAATTA TACTGAGCTT GCGCAGCTGT ATGAGAAGTA CAAAGGCCAT GGTTTCGAGA TTCTTGCGTT TCCGTGTAAC CAGTTTGGGA ATCAAGAGCC TGGTACTAAT
GAAGAGATTG TTCAGTTTGC TTGTACTCGT TTCAAGGCTG AGTACCCGAT TTTCGACAAG GTTGATGTTA ACGGTGACAA AGCTGCCCCA GTCTACAAGT TTCTGAAATC AAGCAAAGGC
GGGCTCTTTG GAGACGGCAT TAAGTGGAAC TTCGCAAAGT TCTTGGTTGA CAAAGATGGA AATGTTGTCG ATCGTTTCGC ACCAACTACC TCACCTCTCA GCATTGAGAA GGATGTGAAG
AAGTTGTTGG GAGTTACTGC TTAAGCAAGG CAAGATTGCA TAATTAGACA AATAAAAGCT CATTAGTATT GTATTACCAA TACTGTGTAG TAAGCTGAGT TCGTGAGTGT GTGCCTTTGG
GACCGCGTAC AATTATAATC CGTTTTTTAG CGGCCAAACT ATGTAATAAT CGTAGATCTA AATATCAGAT TTCCCGTTAC CTTACAATTT GGATCAGTCT TTGTTACCAA AGCATGAAAC
TGTGTCTCCT ACAACAACCG AACAGTCTCT ACATAA
|
Retrieve as FASTA
|
|