Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
167 |
PWM (Da): |
18968.52 |
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PI (pH):
| 4.85 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MATKEPESVYELSIEDAKGNNLALSQYKDKVLLIVNVASKCGMTNSNYTELNELYNRYKDGLEILAFPCNQFGDEEPGTNDQITDFVCTRFKSEFPIFNIEVNGENASPLYKFLKKGKWGIFGDDIQWNFAKFLVDKNGQAVQRYYPTTSPLTLEHDIKNLLNIS* |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (chromo1, 4 introns), 8 cDNAs and 8 ESTs. |
Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGATGAAGC TTTGTTGCTG AATCGTATTG TATTTGATTA TGAACCTCTC TCATTCAATA AAGAGCCATG ACATTGACTT GGATTGATTA GTTCTGTTTG AGAGCCAAAT CGGTTATTTA
GATAAACCAG CATTATTATC TCAGGCTGAT CAACTTGGAT AGATTACTTC ATTTCTAAAA CCAAACACTC AAAACCAAAA CCGAATTGAA CACAGATATT GAAGAAACCA AAGGAAGCTT
TAATGAGTGA TATAAAAGAG TTACAATCTC GTTGAGTAGC CTGAAAGTGG GGTGGTTCTG TTACATTGAG AATGTTACAA TAAGGAACTG AGAGTTCTGG TCTCAATCCT GAAATGTCTG
GTTTTAACAT TCCCAGAGAG AAATCTACAA CAACAAAGAT ATGTACAGCA CTCACATAAT GTATGCTGCT GCTGCTGCTT CCAAGACTAA AGGGTAGTAG TCGGAGTAAA TAGGAAGAAA
GACTAATAAT GTTTTTGTTT TGAATCACCC GCGAGTCAAG TCAATATCAG TGAGTGGGTT TCTGCTAGAG TCAAGTGATC TGCCTGAGCC TGAGCCTGAA ACGGGCCATC CGCTCATTCC
CTGAGCTGGG AAGTTCTGTG GCGTATGCTG ACCCGTCGAT GCTGCAGCTT CTGGTGCACT ACCAGGTGTG GTCTCCATTT CGCTATTGGT CGGCTCTTGC TTAGGTTTTA TTTCTTGTTT
GATGGTCTTG TTATTGTTAT TATTAGACTT TGCACTTGCT CCGTACACGA AACTACAAGC CACCACCTTC AAAATAACAA CCAACAAAAA AATTTAGTTT AAGAGTCACA TTACATATAA
ACAAATCCAA ACAAAATTTC TCAAACCGTA CCAGAACCGT ATTTTGAACT TTTGTATTCC AGGTAGCACA AATGTTATAC CAAACAATTA CAACCAAAAC AAAACTTAAT GGAGCCAAAC
CAATTTTGAA ATACCTGAAC GAGGCTGGCT GCGATAAGCA
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Retrieve as FASTA
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DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCGACGAAGGAACCAGAATCTGTTTACGAGTTAAGCATCGAGGTGAATACATTTCTCTAACTTGAGTCATCGATTCAATAACTCTCTCTGTCTCTGATAACTTGAATGTGAGATCTT TTGTTAAAAGGAAGCACCTTTGATATAAGGGTTCTAAGAATGTGAAGAGTTTTTACTTTAAGGTGTCTTGTAGGCTTTTCCGGATGAAAAGGAATGTCAAATTTTTATATTGTCTGAAGG AACGATTTGTCTTCTGTTGTATCCCGATGTTTAGTTTAGGATTGCTTTTCTCAGTAGAATCAATCAGATCATGATGGATCATGTTTCTTTCTTCTGTTGATTGGTCTCTCACAGATTGTT TTCTATGATCTTTGATTGATTTCTTGTGTTGGCCTCTGAGTCTTTATCTTGTTCTTCCTGTAACAGGATGCAAAAGGGAACAACTTAGCACTCAGTCAATACAAAGACAAAGTTCTTTTA ATTGTCAATGTTGCTTCCAAATGGTTAGTTTATTAGACATTCTATTAAGCTTCTTTCGTTTGTAACTTTCTCGTCTTGTCTTGTTTATTATATACTCTATGATGGTCTCAGTGGGATGAC AAACTCAAACTACACTGAATTGAATGAGCTTTACAACAGGTATAAAGATAAAGGTAAAGTAGTGATTTCAACAAATTTCTAAGTCCACGTTATTAGCTTCCTCATTGATGTTGTTCTGTT GCAGGTCTGGAGATTCTAGCATTTCCTTGTAACCAGTTTGGTGACGAGGAACCGGGAACTAATGACCAAATTACTGACTTTGTTTGTACTCGCTTCAAATCTGAATTCCCCATTTTCAAC AAGGTACTATAGTTCACTCGATGAGTTCACTACAATTCTCTATGATTGTCCTGAAGTTCTTAAAACATTCGTATATGTCCAATTTTGTATTAGATTGAAGTAAACGGAGAGAATGCTTCT CCTCTGTATAAGTTCCTGAAGAAAGGCAAATGGGGAATCTTCGGCGATGACATTCAATGGAACTTTGCTAAGTTTCTTGTTGACAAAAACGGTCAAGCTGTACAACGTTATTATCCAACT ACTTCCCCTCTTACACTTGAGGTAAAGCAACTATCTCTCATTCACTCTCTCTCAGACACTATCTCTGCTAACTTTCTTGTCTCAATTTTTCTGCAGCATGACATAAAGAATCTTCTGAAT ATCTCCTGA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCGACGAAGGAACCAGAATCTGTTTACGAGTTAAGCATCGAGGATGCAAAAGGGAACAACTTAGCACTCAGTCAATACAAAGACAAAGTTCTTTTAATTGTCAATGTTGCTTCCAAA TGTGGGATGACAAACTCAAACTACACTGAATTGAATGAGCTTTACAACAGGTATAAAGATAAAGGTCTGGAGATTCTAGCATTTCCTTGTAACCAGTTTGGTGACGAGGAACCGGGAACT AATGACCAAATTACTGACTTTGTTTGTACTCGCTTCAAATCTGAATTCCCCATTTTCAACAAGATTGAAGTAAACGGAGAGAATGCTTCTCCTCTGTATAAGTTCCTGAAGAAAGGCAAA TGGGGAATCTTCGGCGATGACATTCAATGGAACTTTGCTAAGTTTCTTGTTGACAAAAACGGTCAAGCTGTACAACGTTATTATCCAACTACTTCCCCTCTTACACTTGAGCATGACATA AAGAATCTTCTGAATATCTCCTGA |
Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GTCACGCGCA TTACTCGCGC GTGTGACCAA GTCCCTTTCT CTTGCTTCAG CTTCTTTCTT TCCTTCCTCG TTGACTGCTT CTTCTGCATT TCCCAGTGAG AAATGGCGAC GAAGGAACCA
GAATCTGTTT ACGAGTTAAG CATCGAGGAT GCAAAAGGGA ACAACTTAGC ACTCAGTCAA TACAAAGACA AAGTTCTTTT AATTGTCAAT GTTGCTTCCA AATGTGGGAT GACAAACTCA
AACTACACTG AATTGAATGA GCTTTACAAC AGGTATAAAG ATAAAGGTCT GGAGATTCTA GCATTTCCTT GTAACCAGTT TGGTGACGAG GAACCGGGAA CTAATGACCA AATTACTGAC
TTTGTTTGTA CTCGCTTCAA ATCTGAATTC CCCATTTTCA ACAAGATTGA AGTAAACGGA GAGAATGCTT CTCCTCTGTA TAAGTTCCTG AAGAAAGGCA AATGGGGAAT CTTCGGCGAT
GACATTCAAT GGAACTTTGC TAAGTTTCTT GTTGACAAAA ACGGTCAAGC TGTACAACGT TATTATCCAA CTACTTCCCC TCTTACACTT GAGCATGACA TAAAGAATCT TCTGAATATC
TCCTGAATGA TGAAGCTTTG TTGCTGAATC GTATTGTATT TGATTATGAA CCTCTCTCAT TCAATAAAGA GCCATGACAT TGACTTGGAT TGATTAGTTC TGTTTGAGAG CCAAATCGGT
TATTTAGATA AACCAGCATT ATTATCT
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Retrieve as FASTA
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