Entry information : YlCcP01
Entry ID 2542
Creation 2006-08-29 (Christophe Dunand)
Last sequence changes 2012-03-16 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-03-16 (Christophe Dunand)
Peroxidase information: YlCcP01
Name YlCcP01
Class Cytochrome C peroxidase    [Orthogroup: CcP002]
Taxonomy Eukaryota Fungi Ascomycota Saccharomycetes Dipodascaceae Yarrowia
Organism Yarrowia lipolytica    [TaxId: 4952 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value YlCcP01
start..stop
S start..stop
MvarCcP02 398 8e-141 4..284 5..289
AmacrCcP02 395 9e-140 3..284 4..289
MbicCcP01 390 2e-137 3..269 4..274
TdefCcP01 383 3e-135 3..267 10..275
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 533256..534113 858  
complement(join(533256..534113))


exon

Literature and cross-references YlCcP01
Literature Dujon,B et al., Genolevures Genome evolution in yeasts Nature 430 (6995), 35-44 (2004
Protein ref. UniProtKB:   Q6CAB5
DNA ref. GenBank:   CR382130.1 (534113..533256)
Protein sequence: YlCcP01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   285
PWM (Da):   %s   32254.64  
PI (pH):   %s   4.57
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAEGDYNAVR EAIADILDND DYDDGSIGPV LVRLAWHASG TYDKATGTGG SNGATMRYMK EAKDEANNGL ENARQFLEPI KAKFPWITYA DLWTLAGVVA IEEMDGPKVP WKPGRQDYVD  ETNVPPNGRL PDGAQGQDHL RDIFYRMGFN DQEIVALCGA HNMGRCHMDR SGFEGAWVPN PIRFANTYFK LLMNEEWKLT TLKNGVKQYF NEDEELMMLP ADYSLMQDPE FHKWVEIYAA 
DKEKFFEDFS KVFAKLIELG VRRGPDGKAK TNFIDRNNND PNPRL 

Retrieve as FASTA  
Remarks Complete sequence from genomic (no intron, chromo D). Strain="CLIB122".
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGAGG GAGACTACAA CGCAGTTCGA GAGGCTATTG CTGACATTCT CGACAACGAC GACTACGACG ACGGATCCAT TGGACCCGTG CTTGTCCGAC TAGCATGGCA CGCGTCGGGC  ACCTACGACA AGGCCACTGG AACCGGAGGC TCCAACGGTG CCACCATGCG ATACATGAAG GAGGCCAAGG ACGAGGCCAA CAACGGTCTG GAGAACGCCC GACAGTTCCT CGAGCCCATC  AAGGCCAAGT TCCCCTGGAT CACCTACGCC GATCTGTGGA CTCTGGCTGG CGTTGTGGCT ATCGAGGAGA TGGACGGCCC CAAGGTCCCC TGGAAGCCCG GCCGACAGGA CTACGTCGAC  GAGACCAACG TTCCCCCTAA CGGACGACTC CCCGACGGAG CCCAGGGCCA GGACCACCTT CGAGACATCT TCTACCGAAT GGGTTTCAAC GACCAGGAGA TTGTGGCTCT CTGCGGCGCA  CACAACATGG GCCGATGCCA CATGGACCGA TCCGGTTTTG AGGGCGCCTG GGTGCCCAAC CCCATCCGAT TCGCCAACAC CTACTTCAAG CTGCTGATGA ACGAGGAGTG GAAGCTCACC  ACTCTCAAGA ACGGCGTCAA GCAGTACTTT AACGAGGACG AGGAGCTCAT GATGCTGCCC GCCGACTACT CGCTCATGCA GGACCCCGAG TTCCACAAGT GGGTTGAGAT CTACGCCGCC  GACAAGGAAA AGTTCTTTGA GGACTTCTCC AAGGTCTTCG CCAAGCTCAT TGAGCTCGGT GTTCGACGAG GTCCCGACGG CAAGGCCAAG ACCAACTTCA TTGATCGAAA CAACAACGAT 
CCTAACCCTC GACTTTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGAGG GAGACTACAA CGCAGTTCGA GAGGCTATTG CTGACATTCT CGACAACGAC GACTACGACG ACGGATCCAT TGGACCCGTG CTTGTCCGAC TAGCATGGCA CGCGTCGGGC  ACCTACGACA AGGCCACTGG AACCGGAGGC TCCAACGGTG CCACCATGCG ATACATGAAG GAGGCCAAGG ACGAGGCCAA CAACGGTCTG GAGAACGCCC GACAGTTCCT CGAGCCCATC  AAGGCCAAGT TCCCCTGGAT CACCTACGCC GATCTGTGGA CTCTGGCTGG CGTTGTGGCT ATCGAGGAGA TGGACGGCCC CAAGGTCCCC TGGAAGCCCG GCCGACAGGA CTACGTCGAC  GAGACCAACG TTCCCCCTAA CGGACGACTC CCCGACGGAG CCCAGGGCCA GGACCACCTT CGAGACATCT TCTACCGAAT GGGTTTCAAC GACCAGGAGA TTGTGGCTCT CTGCGGCGCA  CACAACATGG GCCGATGCCA CATGGACCGA TCCGGTTTTG AGGGCGCCTG GGTGCCCAAC CCCATCCGAT TCGCCAACAC CTACTTCAAG CTGCTGATGA ACGAGGAGTG GAAGCTCACC  ACTCTCAAGA ACGGCGTCAA GCAGTACTTT AACGAGGACG AGGAGCTCAT GATGCTGCCC GCCGACTACT CGCTCATGCA GGACCCCGAG TTCCACAAGT GGGTTGAGAT CTACGCCGCC  GACAAGGAAA AGTTCTTTGA GGACTTCTCC AAGGTCTTCG CCAAGCTCAT TGAGCTCGGT GTTCGACGAG GTCCCGACGG CAAGGCCAAG ACCAACTTCA TTGATCGAAA CAACAACGAT 
CCTAACCCTC GACTTTAG 

Retrieve as FASTA