Entry information : TpsAPx05
Entry ID 2561
Creation 2005-12-28 (Nenad Bakalovic)
Last sequence changes 2005-12-28 (Nenad Bakalovic)
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2010-08-31 (Christophe Dunand)
Peroxidase information: TpsAPx05
Name TpsAPx05
Class Ascorbate peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Bacillariophyta Coscinodiscophyceae Thalassiosiraceae Thalassiosira
Organism Thalassiosira pseudonana    [TaxId: 35128 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TpsAPx05
start..stop
S start..stop
TpsCcP04 304 2.32e-102 1..291 64..353
AcaAPx-CcP02 113 1.06e-29 13..178 129..301
AcaAPx-CcP01 108 9.42e-29 13..162 67..223
SYgrAPx03 82 3.99e-19 12..162 30..186
Literature and cross-references TpsAPx05
Literature Madera, M. et al., The SUPERFAMILY database in 2004: additions and improvements, Nucl. Acids Res., 32, D235-D239.
DNA ref. JGI genome:   scaffold_93 (48566..93430)
mRNA ref. JGI transcript:   162046
Protein sequence: TpsAPx05
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   291
PWM (Da):   %s   32628.29  
PI (pH):   %s   5.91
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MDFDRRDKSN PMGSDGCFDP MNPSNSGLPE SVWCTDCLLR KLYEAKYRSL SRADFWIASA NAVIRQTSRN NALDMKEMFT WGRKDAASCR GSADRLPDAT GCKEVETAFL TRMGLEWRDA  AALLGAHSLG RGNATFSGHE GTWVDNANDA QVFDKQYYEE LINNSWRPRN RGLENQDWTT GNNLANQRMM LNTDICLVYN IDNNPNCCTR TDQFFPNGQS KCMSNDLARN KCQLYGQRDS 
RWAATEAVVE FVGGARANRN NEPFYTAFAE AWRKATTNGW SDLAPLTGSC S 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Is it an ascorbate peroxidase????