RedOxiBase: View Perox 2577

Entry information : BoPrx21-1Ca_other

Entry ID	2577
Creation	2006-12-26 (Nenad Bakalovic)
Last sequence changes	2006-12-26 (Nenad Bakalovic)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2012-05-10 (Christophe Dunand)

Peroxidase information: BoPrx21-1Ca_other

Name

BoPrx21-1Ca_other

Class

Class III peroxidase [Orthogroup: Prx002]

Taxonomy

Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica

Organism

Brassica oleracea (Cauliflower) [TaxId: 3712 ]

Cellular localisation

N/D

Tissue type

Whole plant

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	BoPrx21-1Ca_other start..stop	S start..stop
BrPrx21-1Aa_other	683	0	1..330	1..330
BnPrx21-1_other	682	0	1..330	1..330
BnPrx21-2_other	652	0	1..330	1..330
BstrPrx19	651	0	1..328	1..327

Literature and cross-references BoPrx21-1Ca_other

Literature	Barker,G.C. et al., Analyis of EST libraries of Brassica oleracea prepared from differing stages of development, unpublished
DNA ref.	GenBank: BZ505577
EST ref.	GenBank: AM061663.1 [5' end] ES938766.1 [3' end]
Cluster/Prediction ref.	UniGene: Bol.345

Protein sequence: BoPrx21-1Ca_other

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	330 (301)
PWM (Da):	37059.43 (33804.8)	Transmb domain:	i7-29o
PI (pH):	6.59 (6.31)	Peptide Signal:	cut: 30 range:30-330

Sequence 0
Send to BLAST
Send to Peroxiscan

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MANAKMPFCL LAFFCLLLQL FSIFHIGNAE LEMNYYRESC PRAEEIIRQQ VETLYYKHGN TAVSWLRNLF HDCVVKSCDA SLLLETARGV ESEQKSTRSF GMRNFKYVKV IKDALEKECP STVSCADIVA LSARDGIVML KGPKIDMIKT GRRDSRGSYL SDVETLVPNH NDSLSSVLSN FNSMGIDVEA TVALLGAHSV GRVHCVNLVH RLYPTIDPTL DPDYAFYLKN RCPSPNPDPN
AVLYSRNDRE TPMVVDNMYY KNIMAHKGLL VIDDELASDP RTAPFVAKMA ADNDYFHEQF SRGVRLLSET NPLTGDQGEI RKDCRYVNSK

Retrieve as FASTA

Remarks

Complete sequence from 1 GSS (BH956016, ) and 17 ESTs (contains EST from BoPrx21-2).