Entry information : HaAPx01 (HanXRQChr05g0133141)
Entry ID 2599
Creation 2010-05-26 (Christophe Dunand)
Last sequence changes 2016-04-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaAPx01 (HanXRQChr05g0133141)
Name (synonym) HaAPx01 (HanXRQChr05g0133141)
Class Ascorbate peroxidase    [Orthogroup: APx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation Cytosolic
Tissue type Embryos
Inducer Constitutively induced
Repressor N/D
Best BLASTp hits
Perox score E-value HaAPx01
start..stop
S start..stop
HaAPx02 498 0 1..250 1..250
HpAPx01 497 0 1..250 1..250
HargAPx01 496 0 1..250 1..250
GhyAPx01 477 1e-173 1..250 1..250
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 21038441..21038559 119 N° 2 21039358..21039532 175 N° 3 21039611..21039676 66 N° 4 21039799..21039847 49
N° 5 21039976..21040061 86 N° 6 21040143..21040222 80 N° 7 21040293..21040395 103 N° 8 21040472..21040530 59
N° 9 21040628..21040643 16  
join(21038441..21038559,21039358..21039532,21039611..21039676,21039799..21039847 ,21039976..21040061,21040143..21040222,21040293..21040395,21040472..21040530,210 40628..21040643)


exon

Literature and cross-references HaAPx01 (HanXRQChr05g0133141)
Literature Michelmore,R.W., Knapp,S., Rieseberg,L., Bradford,K., Kesseli,R., Boore,J., Kozik,A., Matvienko,M., Lavelle,D. and Lai,Z. Sunflower (Helianthus annuus) ESTs (set 2) from the Compositae Genome Project http://compgenomics.ucdavis.edu/.
DNA ref. HanXRQ genome:   HanXRQChr05 (21038441..21040643)
EST ref. GenBank:   CD854104
Cluster/Prediction ref. HanXRQ:   HanXRQChr05g0133141 UniGene:   Han.5838
Protein sequence: HaAPx01 (HanXRQChr05g0133141)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   251
PWM (Da):   %s   27487.92  
PI (pH):   %s   5.22
Sequence 292
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGKSYPCVSEEYKKAVDKARRKLRGFIADKRCAPLMLRLAWHSAGTYDVNTKSGGPFGTMRYKAELSHGANNGLDIAVRLLEPIKEQFPILSYGDFYQLAGVVAVEIAGGPEVPFHPGREDKEEPPVEGRLPDATKGNDHLRDVFVKTMGLDDIDIVTLSGGHTLGAAHKERSGFEGPWTSNPLVFDNSYFTELLAGEKEGLLKLPTDKALLEDPVFRPLVEKYAADEDAFFADYAVSHMKLSELGFAEA*

Retrieve as FASTA  
Remarks Complete sequence from genomic and 16 ESTs. Assembly by PeroxiBase Team. Strain="ANN1312".
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGGGGAAGAGCTATCCATGTGTTAGTGAGGAGTACAAGAAGGCTGTTGACAAAGCCAGGAGGAAGCTCAGAGGATTTATTGCTGACAAGAGATGTGCTCCTTTGATGCTCCGTCTTGCGT
AAGATTCTGTTATCCCTTTGTATAGGCTAAGACCATGCGTAGTGGTAGAAGGTTATAATGCCCCCACCATGGGGCATTATACGACACGTGGCGTCCTAGTCAGCAAGGGGGCATTATAGC
AAAAGTGGTGTAGTGGGTATAATGCCCCATAATGCCCCTTACAATTATTAAAAAAAAAAAACCTTTTTTAAAAAGCTGAACTATCCCACTCATGTCTCTTCCCATTGGTCAACACTCACA
TGGTCTCATGCAACTTAGTTTGATTTGGGCGTTTTAAAGAAAACGCCGGAAGAAACATTTTTCAAAAATTTTACAAAATAACGCCCCCTGTAATGGAGGGGTGGGCGTTTTCGGGCGTTA
TTTTTGAAATTTTTTTAAAAAAAACGCCCCACTACACATGGTCAAGGGCTTTTTGTGTTGGTAATTTGCTGATTTAATCGAATGCTAGAGATATTTTATAAAGATAACTTGATTAGTTTT
GTGAGGAAGTTAAGAGACTTAGCATAGCATTAGCATGTATATGATGACTTATGAAAACCTTGTTGTGAGTAATCAGTTTAGTATTGCAACTTTGCAATGATACAAATTGGGTTAATCAAG
AAACATTTTATTTGCCTTTAGGATTTAAAATTAAGCAATAATCATGACCCTGTAATTTGTAGTTCGGATAATATTTTCATGTAATTAGTTTGTAAAACAAATGTTTTTTAACTTGAAAAG
AGCTGTTAGGTAACAGATACACAAACTTCTGTTATCATGTCTTAAAAGGTTTTTCTTTTTCTATAATGGGTTACAGATGGCACTCTGCTGGTACTTATGATGTGAACACCAAAAGCGGAG
GTCCTTTCGGTACCATGAGGTACAAGGCTGAGTTGAGCCATGGTGCCAACAATGGTCTTGACATTGCTGTCAGGCTATTAGAGCCTATCAAGGAACAATTTCCCATCCTTTCATATGGTG
ATTTCTATCAG
GTAAGCTAGCTTTGGCTAACTACTTTTGATCTGGATTAACATTTCCATGCTGATTAGCTTCTTAACCTTTTGCTTTAGTTGGCCGGTGTTGTTGCTGTCGAAATTGCTG
GAGGTCCTGAAGTTCCTTTCCATCCGGGAAGGGAG
GTTAGTTTTGTTTTGTTTTGTTAACTTAATGTTTACTAACGGGCTTTTTTGTTCGTATGATTTCTATAATGTTATGATTTTAACG
TTTTATGCCCTAATTGGATAACTTAAATTTGCTTCAGGACAAAGAAGAGCCCCCAGTTGAAGGCCGCCTTCCTGATGCAACTAAGGGTTAGTGAATCTGTTAACTCTGGACGTTCATCTT
GTGTATTGGAACATGATGATTATCTATTTATTTGATGTTTCTGGCTATTAATCATTTGTACCGTATTAAGATGTATCATCTGTATGTATTTCAGGAAACGACCATTTGAGGGATGTTTTT
GTTAAGACCATGGGTCTTGACGACATTGACATTGTGACACTATCTGGTGGCCACACTCTG
GTTGGTGTCGATAGTCACTACATTCATTATTTTCATTAGAATTTGCTTGAGCAAAATTTT
AACGTGTATTTTTTTATATAGGGGGCTGCCCACAAGGAGCGATCTGGATTTGAGGGACCATGGACTTCCAATCCCCTTGTCTTCGACAACAGCTACTTCACGTAAGATTTAGTTTTGGGT
TTATTGCAATTTATAGTTTTATACAAATCCTAAATTAGTTGTTGTAAACAGAGAGCTTCTTGCTGGTGAGAAAGAGGGTCTCCTCAAGCTACCTACCGACAAAGCTCTCCTTGAAGACCC
TGTATTCCGACCCCTGGTTGAGAAATATGCTGCT
GTGAGTACCTTTATAGCTTCAACCCTTGTAGGCTGCATTAGGTACTTGTATGCTTAATTTCGTTGTTTTGAATCAGGACGAGGATG
CTTTCTTTGCCGACTATGCCGTCTCCCACATGAAACTCTCTGAGTTGGG
GTAAAGTTCAACTTTTGATATTTTATAAACACATGTTGACATTTGTGTGCAGAAATGAATGAAGTGTTAAT
TTGTATGTTTATGTCATGATCAACAGATTTGCTGAGGCATAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGGGGAAGAGCTATCCATGTGTTAGTGAGGAGTACAAGAAGGCTGTTGACAAAGCCAGGAGGAAGCTCAGAGGATTTATTGCTGACAAGAGATGTGCTCCTTTGATGCTCCGTCTTGCAT
GGCACTCTGCTGGTACTTATGATGTGAACACCAAAAGCGGAGGTCCTTTCGGTACCATGAGGTACAAGGCTGAGTTGAGCCATGGTGCCAACAATGGTCTTGACATTGCTGTCAGGCTAT
TAGAGCCTATCAAGGAACAATTTCCCATCCTTTCATATGGTGATTTCTATCAG
TTGGCCGGTGTTGTTGCTGTCGAAATTGCTGGAGGTCCTGAAGTTCCTTTCCATCCGGGAAGGGAGG
ACAAAGAAGAGCCCCCAGTTGAAGGCCGCCTTCCTGATGCAACTAAGG
GAAACGACCATTTGAGGGATGTTTTTGTTAAGACCATGGGTCTTGACGACATTGACATTGTGACACTATCTG
GTGGCCACACTCTG
GGGGCTGCCCACAAGGAGCGATCTGGATTTGAGGGACCATGGACTTCCAATCCCCTTGTCTTCGACAACAGCTACTTCACAGAGCTTCTTGCTGGTGAGAAAGAGG
GTCTCCTCAAGCTACCTACCGACAAAGCTCTCCTTGAAGACCCTGTATTCCGACCCCTGGTTGAGAAATATGCTGCT
GACGAGGATGCTTTCTTTGCCGACTATGCCGTCTCCCACATGA
AACTCTCTGAGTTGGG
ATTTGCTGAGGCATAA

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GCGGGGATCG TTTCCTCGTT CTAGGGCTTA TCGATTCTTC AGATTCTTCA TCTTTTCATC CGATTTTAAC GGTTTAAAAC CATGGGGAAG AGCTATCCAT GTGTTAGTGA GGAGTACAAG  AAGGCTGTTG ACAAAGCCAG GAGGAAGCTC AGAGGATTTA TTGCTGACAA GAGATGTGCT CCTTTGATGC TCCGTCTTGC ATGGCACTCT GCTGGTACTT ATGATGTGAA CACCAAAAGC  GGAGGTCCTT TCGGTACCAT GAGGTACAAG GCTGAGTTGA GCCATGGTGC CAACAATGGT CTTGACATTG CTGTCAGGCT ATTAGAGCCT ATCAAGGAAC AATTTCCCAT CCTTTCATAT  GGTGATTTCT ATCAGTTGGC CGGTGTTGTT GCTGTTGAAA TTGCTGGAGG TCCTGAAGTT CCTTTCCATC CGGGAAGGGA GGACAAAGAA GAGCCCCCAG TTGAAGGCCG CCTTCCTGAT  GCAACTAAGG GAAACGACCA TTTGAGGGAT GTTTTTGTTA AGACCATGGG ACTTGACGAC ATTGACATTG TGACACTCTC TGGTGGCCAC ACTCTGGGAG CTGCCCACAA GGAGCGATCT  GGATTTGAGG GACCATGGAC TTCCAATCCC CTTATCTTCG ACAACAGCTA CTTCACAGAG CTTCTTGCTG GTGAGAAAGA GGGTCTCCTC AAGCTACCCA CCGACAAAGC TCTTCTTGAA  GACCCTGTAT TCCGACCCCT GGTTGAGAAA TATGCTGCTG ATGAGGATGC TTTCTTTGCC GACTATGCCG TCTCCCACAT GAAACTCTCT GAGTTGGGAT TTGCTGAGGC ATAAGGAGGA 
TTGTAAGAAA GGAGGGATGC TGCTACT 

Retrieve as FASTA