Entry information : HaGPx07 (HanXRQChr03g0086581/GPXHA-1 / HaGPx06-2)
Entry ID 2652
Creation 2005-12-25 (Marcia Pinheiro Margis)
Last sequence changes 2016-05-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaGPx07 (HanXRQChr03g0086581/GPXHA-1 / HaGPx06-2)
Name (synonym) HaGPx07 (HanXRQChr03g0086581/GPXHA-1 / HaGPx06-2)
Class Plant glutathione peroxidase    [Orthogroup: Gpx2003]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue types Buds
Hypocotyls
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaGPx07
start..stop
S start..stop
LeGPx08 270 1.08e-94 1..164 1..167
NtGPx08-1A 269 2.83e-94 1..167 1..170
StGPx08 269 5.06e-94 1..164 1..167
PtGPx08 263 7.75e-92 1..166 1..169
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '2652' 'join(146707950..146707994,146708593..146708669,146708883..146708944,146709832..146709950,146710040..146710207,146711166..146711198)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 146707950..146707994 43 N° 2 146708593..146708669 75 N° 3 146708883..146708944 60 N° 4 146709832..146709950 117
N° 5 146710040..146710207 166 N° 6 146711166..146711198 31  
join(146707950..146707994,146708593..146708669,146708883..146708944,146709832..1 46709950,146710040..146710207,146711166..146711198)


exon

Literature and cross-references HaGPx07 (HanXRQChr03g0086581/GPXHA-1 / HaGPx06-2)
Literature Roeckel-Drevet,P., Gagne,G., Tourvielle de Labrouhe,D.,Dufaure,J.P., Nicolas,P. and Drevet,J.R. Molecular characterization, organ distribution and stress-mediated nduction of two glutathione peroxidase-encoding mRNAs in sunflower (Helianthus annuus). Physiol. Plantarum 103, 385-394 (1998)
Protein ref. UniProtKB:   O23970
DNA ref. HanXRQ genome:   HanXRQChr03 (146707950..146711198)
mRNA ref. GenBank:   Y14429
Cluster/Prediction ref. HanXRQ:   HanXRQChr03g0086581 UniGene:   Han.862
Protein sequence: HaGPx07 (HanXRQChr03g0086581/GPXHA-1 / HaGPx06-2)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   167
PWM (Da):   %s   18720.52  
PI (pH):   %s   4.81
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAAQPKKTLYDFTVKDAKGNDVDLSVYKGKVVLIVNVASKCGLTNNNYDELNQIYLKYKEGFEILAFPCNQFGAQEPGTNEEIVDFVCTKFKSEFPIFDIDVNGENAAPVYEFLKTGFYG
ILGGDIQWNFSKFLVDKNGQPVDRYYPTTSPLTVE
RDIQKLLGLL*

Retrieve as FASTA  
Remarks Complete sequence from genomic, 1 mRNA and 3 ESTs. Cultivar="Emil" and "psc8".
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGCCCAACCCAAGAAAACCCTCTATGATTTCACAGTCAAGAGGTTCCGAATTTCTCTCTCAACAACCCTAATTTCAATTTTCATTTTTTTTTGTGGAATTGATTAACAATAATTA
GAATTGACAGGCTAATCAAAACCCAGAAATTATGAACAAGTTTATTTCACTAATCTGTTGAAAAGATAGAAAAAATTCAACCTTTTCTTATTTTTATGTTAAATATTGGTTTTGACCATG
TAAAGTTTTTGTTACTAATTTTTTATCATGCATGTGGCTTTTTTAGTTTTTGTTACAGGGTTTTATTTAGTTAGTTAGATAGTTAGTTATTGAATTTGGATTGGAAGTTTCAAGATGCAT
GTTAGTTTTTCAGTTAGAAGCCTCTGTTTGACACACAAAAGTCAATGATCCAGATTGAGTCTTTCTTTGAAACTCTATAGTGTCTACAGTATACACCTTCAGTTTTTAAATTAACCAAAA
AAAAATTAGGCCTCCAATATTAAGTTAAATTAAATTTATTAGTTAGTTTGGACCTCTGCCACTTACTTTAGGTTGATCTAGCTTTGGATTGATCTCATAAGTTTTGTGTTATTTTTTAGT
ATTTAATTTTGGCTTTTTGGTGATTTAATCTTCGATTCGGTGCAGGATGCTAAGGGTAACGATGTAGACCTTAGCGTATACAAGGGAAAAGTTGTACTTATTGTTAACGTTGCGTCCAAG
TG
TGGTACGCGCTCACTATCTTCACTACTATTTTGTTTGAATGTTCTTGCAGCCCATTTGCCCTTTTGTAATTTAAAAACAAGCTCAGCTTTTCTTTTCTTTTTTCTTTTTTCTTTTTTT
TTTTTTTTTGCTATTTAACTACCTTTTTAAATAGGCTTTGTGATTGTATCTCCTGAAGTTGCTTATAGTCAATTGTGTTGTTGGTTCTTTGTGGCAGTGGGCTTACAAACAACAACTATG
ATGAACTGAATCAGATTTATTTGAAGTACAAGGAGAAAG
AGGTTTGTAGTTTTTGGTTTCGGTTTCAAGTTTGATATAAAACTCGTTTCATTCATACCGAAGCTGATGTTCAAGATGTCA
GTTTGGTATGGAGTGATCGGAATTACGGAAGATGATGTTCGACTTCTTATTTGTTGCAAAACATATAAAAAGATTGTAAATTGCAGAAAAAAAAATAATGAGTTTGAAATATAATCATTG
TCAGTTACACCTTTTATAAAGAATGATATATTATTGCAAGAAAAGTTTGGTTTTTTTATTTGTATTTTATAATGATGGTGTCAGTTAGTAGTTAAAGTAGAAGTAGAACTAGGGCTGCAA
ACGAACCAAATGTTCGGCGAACAGTTCGTGAACTGTTCGGCGGGAAGTTCGTTTGTGTTCGTTCGTTTATTAAACAAACGAACACGAACAAGAAATTTTGTTCGTTTAGTTAAATGAACA
AACATGAACAGAGGTCGTGTTCGTTCGTTTATGTTCGTGAACGTTCGGTAATGTGTTCGTTTGTGTTCGATAGTTCATTAGTGTTTTTAGTTTTTATATTTATTTAAATACTTCAAAATT
CCGACAAATTAAATATCTAATAAGTGTCAGTGTATTATATATTTTGTTCATGAATGATTGTTTGTGTTCGTTTGTTTCCATTTGTGTTTATGAACATTAGTTTGTGCTCATTTGTGTTCG
TCAACGCTTGTTTTTGTTTCTTGCCTAAAATTAACAAACAAACACAAACGAACACGAACATAAAATCTCGTTCGATAAGTGTTCGTGAACTGTTCGCGAACACATATATTTCTTAACAAA
CGAACACGAACAAGGTCTTGTTCGTCTTCGTTTGGTTCGTTTGCAGCCCTAAGTAGAACTGTATAATGTTCAACTTCAATGAATATAGGTTTTGAGATCTTGGCATTTCCATGCAACCAA
TTTGGAGCTCAGGAACCAGGAACCAACGAAGAAATTGTCGACTTCGTCTGCACCAAATTCAAATCAGAATTTCCCATCTTTGACAAG
AGGTGAAATTCAAACAACCCACCATGAAAAAGC
TACTAAAGTTTCAAAATTTATCAAAAAAGATTAAAACTTTGATGCAATTTCAACACAGATTGATGTGAATGGCGAGAACGCTGCACCTGTATACGAGTTCTTGAAAACAGGGTTCTATGG
AATTCTTGGGGGAGACATTCAATGGAACTTTTCCAAGTTCTTGGTTGATAAAAACGGCCAACCTGTCGACCGCTACTATCCCACAACTTCCCCTCTTACAGTCGAG
AGGTAAAAAGACAG
AAATACCCTTTTAAACAACCAATCTTAGGGGTGCTCATCCGACTGAATAACGAATTTTCAAGTTACTCGAATCGAATTTATTGAATAATTTTTTATTTTGCTGGAATTCAAATTCGATTA
AAAACTGGTCAATTCGATTCAAATTCGTATTCAAATTAAAACGCCAATTCGAATTGGAATCGAATTCGGATAATTCGAATAAATTCGTTTTGATTCAAATCAATTTAAAATATTTAAATT
CGTTATGGGCTATTTTAGGACTTAGATTAAAGAGTAAATTGTCATTTTAGTCCCTGAGTTTTTGTCCAAATTGTCATTTTAGTCCAAATAGTTTTTTTTTCTCCTCTGGATCCCCGACTT
TTCCTTTTTTTTTTTTGGTCATTTTGATCACATTGCCTAACTTAATCTAAAAACCAGGTTATAATCAGGGGTATTTTGGCATTAAATTATTATGAGGTTTATAAATTATGTTGTAAACTA
CCCCTGGTTATCACTACACAATAGTTATGCCAAAAATACCCCTGGTTATAACCAGATTTTTAGATTAAGTTAGGCAATGTGATCAAAATGGCAAGAAAATGGAAAAGTCAGGGACCCTCT
GGATGAAAAAAAAAAAACTATTTGGACTAAAATGGCAATTCGGACCAAACCTCAAGGACTAAAATGGAATTTACTCTAGATTAAATCTATAGATTAGCTTATACTATAGCCCAAATTAAA
GTTACATGTGTATTATTTATAAATATAATAAATAAAAATGTATAATTTGAATACGAATTTAAAATTATAAACTCGTATTTGATTTACTGGACTCGAATTCGAATTTCAATTTTTTGATAA
TCAAATCGAATTGAGTCAAATTTCTAATTTTTCAAATCGGAATCGAATTCTAAACACTCTTGAATCACACTACTTCATCTTGCATAACTCGTGTTGTTTTTTGCAGAGAGACATTCAGAA
GCTCTTGGGTCTCCTCTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTGCCCAACCCAAGAAAACCCTCTATGATTTCACAGTCAAGGATGCTAAGGGTAACGATGTAGACCTTAGCGTATACAAGGGAAAAGTTGTACTTATTGTTAACGTTGCGTCCAAG
TG
TGGGCTTACAAACAACAACTATGATGAACTGAATCAGATTTATTTGAAGTACAAGGAGAAAGGTTTTGAGATCTTGGCATTTCCATGCAACCAATTTGGAGCTCAGGAACCAGGAACC
AACGAAGAAATTGTCGACTTCGTCTGCACCAAATTCAAATCAGAATTTCCCATCTTTGACAAG
ATTGATGTGAATGGCGAGAACGCTGCACCTGTATACGAGTTCTTGAAAACAGGGTTC
TATGGAATTCTTGGGGGAGACATTCAATGGAACTTTTCCAAGTTCTTGGTTGATAAAAACGGCCAACCTGTCGACCGCTACTATCCCACAACTTCCCCTCTTACAGTCGAG
AGAGACATT
CAGAAGCTCTTGGGTCTCCTCTAG

Retrieve as FASTA  
cDNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCAAAAAC CAAAAAGTAT CAAATATACG GCTGTTGGGG CGTCCCTTTT GGAATATATT CGCTTGTTTT TGTCACGTTT TGAATTGGAG CCACCAATGC CAAATAAATT CAATTAATTC  CGCCAAATAA ATTCAATAAT AATAATACAC ACCTGATCTG ATCATCTTGT TGCCCATTTC AACAATCAAA AACCAGCAAT CATCCATGGC TGCCCAACCC AAGAAAACCC TCTATGATTT  CACAGTCAAG GATGCTAAGG GTAACGATGT AGACCTTAGC GTATACAAGG GAAAAGTTGT ACTTATTGTT AACGTTGCGT CCAAGTGTGG GCTTACAAAC AACAACTATG ATGAACTGAA  TCAGATTTAT TTGAAGTACA AGGAGAAAGG TTTTGAGATC TTGGCATTTC CATGCAACCA ATTTGGAGCT CAGGAACCAG GAACCAACGA AGAAATTGTC GACTTCGTCT GCACCAAATT  CAAATCAGAA TTTCCCATCT TTGACAAGAT TGATGTGAAT GGCGAGAACG CTGCACCTGT ATACGAGTTC TTGAAAACAG GGTTCTATGG AATTCTTGGG GGAGACATTC AATGGAACTT  TTCCAAGTTC TTGGTTGATA AAAACGGCCA ACCTGTCGAC CGCTACTATC CCACAACTTC CCCTCTTACA GTCGAGAGAG ACATTCAGAA GCTCTTGGGT CTCCTCTAGA TTTCAAGATT  TGCAGAAACT GTTTTAATGT GCATCTTTCA TTTCAAGAAT GCCCCTATGT TGAATAATGG CATACTTATC TTTCATTTTC TGCTGTATGG TTTAAACCTA TTTAATAATA TTTGCAAAAA 

Retrieve as FASTA