Entry information : SbPrx81 (Sobic.004G273900.1 [2.1] / SB04G031120 [1.4])
Entry ID 2711
Creation 2008-11-19 (Christophe Dunand)
Last sequence changes 2008-11-19 (Christophe Dunand)
Sequence status complete
Reviewer Messaoudi
Last annotation changes 2014-08-04 (Messaoudi)
Peroxidase information: SbPrx81 (Sobic.004G273900.1 [2.1] / SB04G031120 [1.4])
Name (synonym) SbPrx81 (Sobic.004G273900.1 [2.1] / SB04G031120 [1.4])
Class Class III peroxidase    [Orthogroup: Prx018]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Sorghum
Organism Sorghum bicolor    [TaxId: 4558 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SbPrx81
start..stop
S start..stop
ZmPrx118 584 0 3..336 1..337
SiPrx74 555 0 3..336 1..331
PedPrx06 499 7e-180 18..336 19..337
SiPrx108 484 6e-174 7..334 6..333
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 61119846..61120856 1011  
join(61119846..61120856)


exon

Literature and cross-references SbPrx81 (Sobic.004G273900.1 [2.1] / SB04G031120 [1.4])
Literature JGI.
DNA ref. Phytozome 12:   chromosome_4 (61119846..61120856)
Protein sequence: SbPrx81 (Sobic.004G273900.1 [2.1] / SB04G031120 [1.4])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   336 (310)
PWM (Da):   %s   36268.07 (33614.8) Transmb domain:   %s   i7-26o
PI (pH):   %s   7.5 (7.53) Peptide Signal:   %s   cut: 27 range:27-336
Sequence
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Send to Peroxiscan
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MNMMNQWLVF ACALLAASSS AALASASSPL QVGFYKHSCP QAEDMVRNAV RRAVARDPGV AAGLIRMHFH DCFVRGCDAS ILLDSTPGQP QQEAEKHSPA NFPSLRGFEV IDEAKAIVEA  HCPRTVSCAD IVAFAARDGA YLAGGIDYRV PAGRRDGRVS VKDEVLKDNL PFPDSTVAKL IESFRRKGLS ADDMVTLSGA HSIGRSHCSS VTARLYSFLG ETGRTDPALN PAYAADLKRR 
CPPSTEDRTT VPLDMVTPNT FDNQYFKNVL AHKVPFTSDQ TLLDSPWTAG LVAFHAAVGQ AWEAKFAKAM VKMGAIEVLT GHEGEIRQKC SMVNYY 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 4, no intron). No EST.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAACATGA TGAATCAGTG GCTAGTGTTT GCATGTGCCT TGCTGGCGGC CTCCTCCTCG GCGGCGCTCG CGTCCGCGTC CTCGCCGCTG CAGGTCGGGT TCTACAAGCA CTCGTGCCCG  CAGGCCGAGG ACATGGTGCG CAACGCCGTC CGCCGCGCCG TCGCCAGGGA CCCCGGCGTC GCCGCGGGCC TCATCCGGAT GCACTTCCAC GACTGCTTCG TCCGGGGGTG CGACGCCTCC  ATCCTGCTCG ACTCCACGCC GGGGCAGCCG CAGCAGGAGG CCGAGAAGCA CTCGCCGGCC AACTTCCCGA GCCTGCGCGG GTTCGAGGTC ATCGATGAGG CCAAGGCCAT CGTGGAGGCG  CACTGCCCGC GCACGGTCTC CTGCGCCGAC ATCGTCGCCT TCGCCGCGCG CGACGGGGCC TACCTCGCCG GCGGCATCGA CTACCGCGTC CCCGCCGGCC GCCGCGACGG CCGCGTGTCC  GTCAAGGACG AGGTGCTCAA GGACAACCTG CCGTTCCCGG ACTCCACCGT GGCGAAGCTC ATCGAGAGCT TCAGGCGCAA GGGCCTCTCC GCGGACGACA TGGTCACGCT CTCCGGCGCG  CACTCCATCG GCCGCTCGCA CTGCTCGTCG GTCACGGCCC GGCTGTACAG CTTCCTGGGC GAGACGGGGC GGACGGACCC GGCCCTCAAC CCGGCGTACG CGGCGGACCT GAAGCGGCGG  TGCCCGCCAT CCACGGAGGA CCGCACCACG GTGCCGCTCG ACATGGTGAC GCCCAACACC TTCGACAACC AGTACTTTAA GAACGTGCTG GCGCACAAGG TGCCCTTCAC CTCCGACCAG  ACGCTGCTCG ACAGCCCCTG GACCGCGGGG CTCGTCGCGT TCCACGCCGC CGTCGGCCAG GCGTGGGAGG CCAAGTTCGC CAAGGCGATG GTCAAGATGG GCGCCATCGA GGTACTCACC 
GGCCATGAGG GCGAGATCAG GCAAAAGTGC TCCATGGTGA ACTACTACTA G 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAACATGA TGAATCAGTG GCTAGTGTTT GCATGTGCCT TGCTGGCGGC CTCCTCCTCG GCGGCGCTCG CGTCCGCGTC CTCGCCGCTG CAGGTCGGGT TCTACAAGCA CTCGTGCCCG  CAGGCCGAGG ACATGGTGCG CAACGCCGTC CGCCGCGCCG TCGCCAGGGA CCCCGGCGTC GCCGCGGGCC TCATCCGGAT GCACTTCCAC GACTGCTTCG TCCGGGGGTG CGACGCCTCC  ATCCTGCTCG ACTCCACGCC GGGGCAGCCG CAGCAGGAGG CCGAGAAGCA CTCGCCGGCC AACTTCCCGA GCCTGCGCGG GTTCGAGGTC ATCGATGAGG CCAAGGCCAT CGTGGAGGCG  CACTGCCCGC GCACGGTCTC CTGCGCCGAC ATCGTCGCCT TCGCCGCGCG CGACGGGGCC TACCTCGCCG GCGGCATCGA CTACCGCGTC CCCGCCGGCC GCCGCGACGG CCGCGTGTCC  GTCAAGGACG AGGTGCTCAA GGACAACCTG CCGTTCCCGG ACTCCACCGT GGCGAAGCTC ATCGAGAGCT TCAGGCGCAA GGGCCTCTCC GCGGACGACA TGGTCACGCT CTCCGGCGCG  CACTCCATCG GCCGCTCGCA CTGCTCGTCG GTCACGGCCC GGCTGTACAG CTTCCTGGGC GAGACGGGGC GGACGGACCC GGCCCTCAAC CCGGCGTACG CGGCGGACCT GAAGCGGCGG  TGCCCGCCAT CCACGGAGGA CCGCACCACG GTGCCGCTCG ACATGGTGAC GCCCAACACC TTCGACAACC AGTACTTTAA GAACGTGCTG GCGCACAAGG TGCCCTTCAC CTCCGACCAG  ACGCTGCTCG ACAGCCCCTG GACCGCGGGG CTCGTCGCGT TCCACGCCGC CGTCGGCCAG GCGTGGGAGG CCAAGTTCGC CAAGGCGATG GTCAAGATGG GCGCCATCGA GGTACTCACC 
GGCCATGAGG GCGAGATCAG GCAAAAGTGC TCCATGGTGA ACTACTACTA G 

Retrieve as FASTA