Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
333 |
PWM (Da): |
36575.03 |
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PI (pH):
| 10.31 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASKQRRIAV TIITASIFVL FMSGSSFAKH LRPDFYDKTC PKAFSIIKSE LEDAVKKEAR IAASLLRLHF HDCFVKGCDG SVLLDDTANF TGEKTANPNR NSARGFDVID KIKSRLEKAC
PGVVSCADIL AVVARDAVVM SGGPKWTVLL GRRDSRSASK SGANNDIPAP TSTLQTLKTK FKRKGLNIVD LVVLSGAHTI GKSRCTSFKA RLYNQTGNGK PDKTLDKAYL NQLRAKCPQT
GTDDNATTPL DPSSPTVFDN HYYTNLVTNR GLLNSDQVLY STRASKTAQL VKLYREDTTE FYCQFARSII KMGNISPLTG SKGEIRKNCR RVN*
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Retrieve as FASTA
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Remarks |
Complete sequence from 1 EST (Large 5'end is missing, extra sequence within the VALS (splicing error!!!)) and RNA se (Welmir_2059685, short 3' is missing) |
CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCGAGCA AACAACGCCG CATCGCGGTG ACGATCATCA CCGCTTCCAT CTTCGTTTTG TTCATGTCAG GAAGCTCATT TGCGAAACAT CTTCGCCCGG ATTTCTATGA CAAGACGTGT
CCGAAGGCGT TTAGCATTAT CAAGTCTGAG CTCGAAGATG CTGTGAAAAA GGAGGCCAGA ATTGCCGCTT CTCTGCTCCG CCTGCACTTC CATGACTGCT TTGTTAAGGG ATGCGATGGT
TCGGTTCTCC TGGATGACAC GGCCAACTTC ACAGGCGAAA AGACTGCGAA TCCGAACAGG AATTCAGCTC GAGGTTTCGA CGTAATAGAC AAGATCAAAT CCAGGCTCGA GAAGGCCTGT
CCAGGGGTAG TCTCTTGTGC TGATATCCTT GCGGTCGTCG CTCGTGACGC CGTCGTTATG AGTGGAGGAC CGAAGTGGAC AGTGTTGCTG GGGAGAAGGG ATTCCAGATC TGCAAGCAAA
AGCGGGGCGA ACAACGACAT TCCAGCTCCC ACGTCAACAC TTCAGACCCT AAAGACCAAA TTTAAGCGCA AGGGCCTCAA CATCGTAGAC CTCGTCGTTC TCTCTGGGGC TCATACGATA
GGAAAGTCAC GTTGCACGAG CTTCAAAGCT CGACTGTACA ACCAGACAGG AAACGGGAAA CCAGACAAAA CGCTGGACAA GGCCTATCTG AACCAGCTGA GGGCCAAGTG TCCCCAAACT
GGAACCGACG ATAACGCAAC GACGCCTCTT GACCCCTCCA GCCCTACAGT GTTTGACAAC CATTACTACA CTAATCTAGT TACCAATCGG GGACTTCTAA ACTCCGATCA GGTTCTGTAC
TCTACCCGCG CAAGCAAAAC CGCTCAACTG GTTAAGCTCT ACAGGGAAGA CACCACAGAA TTCTATTGTC AATTCGCTCG TTCCATAATC AAGATGGGCA ACATTTCCCC ACTAACAGGC
TCCAAGGGAG AGATCCGTAA AAATTGTCGC AGGGTCAACT GA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GTTTCAAAGA AAGCAATGGC GAGCAAACAA CGCCGCATCG CGGTGACGAT CATCACCGCT TCCATCTTCG TTTTGTTCAT GTCAGGAAGC TCATTTGCGA AACATCTTCG CCCGGATTTC
TATGACAAGA CGTGTCCGAA GGCGTTTAGC ATTATCAAGT CTGAGCTCGA AGATGCTGTG AAAAAGGAGG CCAGAATTGC CGCTTCTCTG CTCCGCCTGC ACTTCCATGA CTGCTTTGTT
AAGGGATGCG ATGGTTCGGT TCTCCTGGAT GACACGGCCA ACTTCACAGG CGAAAAGACT GCGAATCCGA ACAGGAATTC AGCTCGAGGT TTCGACGTAA TAGACAAGAT CAAATCCAGG
CTCGAGAAGG CCTGTCCAGG GGTAGTCTCT TGTGCTGATA TCCTTGCGGT CGTCGCTCGT GACGCCGTCG TTATGAGTGG AGGACCGAAG TGGACAGTGT TGCTGGGGAG AAGGGATTCC
AGATCTGCAA GCAAAAGCGG GGCGAACAAC GACATTCCAG CTCCCACGTC AACACTTCAG ACCCTAAAGA CCAAATTTAA GCGCAAGGGC CTCAACATCG TAGACCTCGT CGTTCTCTCT
GGGGCTCATA CGATAGGAAA GTCACGTTGC ACGAGCTTCA AAGCTCGACT GTACAACCAG ACAGGAAACG GGAAACCAGA CAAAACGCTG GACAAGGCCT ATCTGAACCA GCTGAGGGCC
AAGTGTCCCC AAACTGGAAC CGACGATAAC GCAACGACGC CTCTTGACCC CTCCAGCCCT ACAGTGTTTG ACAACCATTA CTACACTAAT CTAGTTACCA ATCGGGGACT TCTAAACTCC
GATCAGGTTC TGTACTCTAC CCGCGCAAGC AAAACCGCTC AACTGGTTAA GCTCTACAGG GAAGACACCA CAGAATTCTA TTGTCAATTC GCTCGTTCCA TAATCAAGAT GGGCAACATT
TCCCCACTAA CAGGCTCCAA GGGAGAGATC CGTAAAAATT GTCGCAGGGT CAACTGAATA TGATGTCCTT GTTCTCTTTT GCGGCTTTAG AGTGTGGGCC TCATTGTGGC TTCTCGTATA
CAATAACGGA GTGAACTCCT TCACTCTCCA GATGATTGTT AATTTTATTT ATCTAAAAGT AATTTATGAT TCAG
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Retrieve as FASTA
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