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Entry information : YfiAPx01
Entry ID 2838
Creation 2006-08-11 (Christophe Dunand)
Last sequence changes 2016-01-14 (Achraf Jemmat)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2016-01-14 (Christophe Dunand)
Peroxidase information: YfiAPx01
Name YfiAPx01
Class Ascorbate peroxidase     [Orthogroup: APx001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Asparagaceae Yucca
Organism Yucca filamentosa    [TaxId: 55960 ]
Cellular localisation Cytosolic
Tissue types Flower buds
Inflorescences
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value YfiAPx01
start..stop		 S start..stop
EgrAPx03 340 4.03e-121 1..172 1..172
EcamAPx03 337 1.08e-119 1..172 1..172
AcAPx03 335 1.8e-119 1..172 1..172
QshAPx01 335 6.14e-119 1..172 1..172
Literature and cross-references YfiAPx01
Literature dePamphilis,C. et al., Generation of ESTs from yucca filamentosa premeiotic flower buds (
EST ref. GenBank:   DT585038.1 [5' end]
Protein sequence: YfiAPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   172 (300)
PWM (Da):   %s   18686.57 (32527.5) Transmb domain:   %s   i193-211o221-243i272-294o314-336i349-371o376-395i537-559o
PI (pH):   %s   6.95 (7.76) Peptide Signal:   %s   cut: 52 range:52-351
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVKSYPTVSE EYQKAVEKCK KKLRGLIAEK NCAPLMLRLA WHSAGTYDVK TKTGGPFGTI RHSAELAHGA NNGLDIAVRL LEPIKEQFPI LSYGDFYQLA GVVAVEVTGG PEIPFHPGRE 
DKPEPPEEGR LPDATKGSDH LRDVFGHMGL SDQDIVALSG GHTLGRCHKE RS 

Retrieve as FASTA  
Remarks Partial sequence from one EST. 3' end is missing
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGTGAAGT CTTACCCAAC AGTGAGCGAG GAATACCAGA AGGCCGTCGA GAAATGCAAG AAGAAGCTCC GCGGCCTCAT CGCCGAGAAG AACTGCGCCC CTTTGATGCT CCGATTAGCG  TGGCACTCGG CGGGGACCTA CGACGTGAAG ACGAAGACAG GCGGCCCGTT CGGTACGATC AGGCACTCAG CTGAGCTGGC ACATGGGGCC AACAACGGGC TCGACATCGC CGTTCGCCTC  TTGGAGCCGA TCAAGGAGCA GTTCCCGATC TTGTCCTACG GTGACTTTTA CCAGTTGGCT GGAGTTGTAG CGGTTGAAGT TACCGGCGGT CCCGAGATCC CCTTTCATCC TGGCCGTGAG  GACAAGCCAG AACCACCTGA AGAAGGACGT CTCCCTGATG CCACCAAAGG TTCGGACCAT CTCAGAGATG TGTTTGGCCA CATGGGTCTT AGTGATCAGG ATATTGTTGC TCTTTCTGGT 
GGTCACACAC TGGGAAGATG CCACAAAGAG CGATCA 

Retrieve as FASTA